Query= MSMg01no526_m11.b1 MSMg01no526_m11.b1 CHROMAT_FILE:
MSMg01no526_m11.b1 PHD_FILE: MSMg01no526_m11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:48 2005
(518 letters)
>mm_chr13_29337398_29338315
Length = 918
Score = 663 bits (343), Expect = 0.0
Identities = 349/351 (99%)
Strand = Plus / Plus
Query: 164 tttggatattgcgtttaagaatcaagagtgagatgctatttccaaatacaaataaggcct 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tttggatattgcgtttaagaatcaagagtgagatgctatttccaaatacaaataaggcct 423
Query: 224 gagagtgagaagaccctgaaaaccaaaaaggaaagccagacttataaactcaacaaggca 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gagagtgagaagaccctgaaaaccaaaaaggaaagccagacttataaactcaacaaggca 483
Query: 284 caagaaaataaggcaattttttcttttaattaaagaggacaggtaataggagttaaagac 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 caagaaaataaggcaattttttcttttaattaaagaggacaggtaataggagttaaagac 543
Query: 344 aagacaattgaagatcaagcaagagtgcccaacacttggataataggggaagcatctacc 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aagacaattgaagatcaagcaagagtgcccaacacttggataataggggaagcatctacc 603
Query: 404 acagacacacatatagccacaataaaacataagccaacacaatatacaggtatgttttaa 463
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 604 acagacacacatatagccacaataaaacataagccaacacaatatacaggtatattttaa 663
Query: 464 gaagcgataaagctaaattggtgagggaagagaagggaggaaaaaaaagat 514
||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 664 gaagcgataaagctaaattggggagggaagagaagggaggaaaaaaaagat 714
Score = 85.8 bits (44), Expect = 7e-21
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 129 gagatacgtgagccacacagaaagcaaaagaaaattttggatattgcg 176
|||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 gagatacgtgagccacactgaaagcaaaagaaaattttggatattgcg 48
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_m11.g1 MSMg01no526_m11.g1 CHROMAT_FILE:
MSMg01no526_m11.g1 PHD_FILE: MSMg01no526_m11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:48 2005
(508 letters)
>mm_chr13_29463003_29463912
Length = 910
Score = 946 bits (489), Expect = 0.0
Identities = 504/510 (98%), Gaps = 2/510 (0%)
Strand = Plus / Minus
Query: 1 attgagacttttggttttattagcaatcactctagagaaataagtttgtttgcttatttg 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 attgagacttttggtttttttagcaatcactctagagaaataagtttgtttgcttatttg 651
Query: 61 gttcagtgggatcttttattcttggtttaaatatgtgc--aaaaaaaaagtcccctgtcc 118
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 650 gttcagtgggatcttttattcttggtttaaatatgtgcaaaaaaaaaaagtcccctgtcc 591
Query: 119 acaagtcctgtctgtctccccgtgttgaatttcatgtattttcacacttgtctgtcatcc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 acaagtcctgtctgtctccccgtgttgaatttcatgtattttcacacttgtctgtcatcc 531
Query: 179 aaaggaagcacagagacgaggtctgaaccaagactctcatttaaattgcatgatgtgtgc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aaaggaagcacagagacgaggtctgaaccaagactctcatttaaattgcatgatgtgtgc 471
Query: 239 atgtacgtgtgcacccagctaattacaggttgcaatagaatgtggtaggatttcaatttc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 atgtacgtgtgcacccagctaattacaggttgcaatagaatgtggtaggatttcaatttc 411
Query: 299 gcttcattatgtctcagacagggacataacattgagaaggaattgctttgctgggggaag 358
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 410 gcttcattatgtctcagacagggacataacattgagaaggaattgctaggctgggggaag 351
Query: 359 agaagcacataggtagaagtaagtttctttcaatgcagacttttaagggggatgggattt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agaagcacataggtagaagtaagtttctttcaatgcagacttttaagggggatgggattt 291
Query: 419 agtttggggtcttgttttgttttgttaggtcaacaaagacctctttcggtgggagtccta 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 agtttggggtcttgttttgttttgttaggtcaacaaagacctctttcggtgggagtccta 231
Query: 479 tcagatggatagcangacttgcttgtgctt 508
|||||||||||||| |||||||||||||||
Sbjct: 230 tcagatggatagcaggacttgcttgtgctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 910
Length adjustment: 10
Effective length of query: 498
Effective length of database: 900
Effective search space: 448200
Effective search space used: 448200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
