GAAAAGAGTCCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACAATCCCTGGGTCTCAGGGGGGTAGTTAGAATCTGGG
TTTATTTACCATCTTAATAGGGGCTGGGAAGAGGGGCACTTCTGTGAGAA
GGGGGAGAAGAGGAGAGACACTTAGAGAAAAGCAAAAGACCTTTTGGAAA
GATAAATGGACCCTTCGGAGGAGAGATGGGAGATGTAATGTGGCTGTGAT
AATATCAGAGCGTGGTGCTGATTTCTGCTCTCCAAAAAGAGATTAGAATT
GCTTCTAGGGCAGGGATTTATGACAATTGGAGGGTAGAAGCTCTGCTTTT
AGGCAGATAAGACATTATGGGAATCCAAATGCCTTCAGCTCAAAATAACT
TTTGTAGACCACCGAGGCTTTTTCTAGACTCTTTCTCTCAGCCTCGGTCT
GCCCATGCTTGGAAACCGAGAGACCACAGCTCCTCTCAGCATTACAGAAT
CTCCAAATGGCCACTCACCAGCCAGACGCCAAACCAGTTCAACTTTTTCT
GGGCGAGCAGGATTTCCCTTCATCCCTTTCCTTTTTCTGAAACACCAGCT
AAGCCCTACCCAGAGGATCTTTTAAACAAAGCATCGGAAGGGCTTATCTT
TTGGGTACCAACAACTTGTGCTTTGTCCAGGGAACACAAAGACTTGGTTT
TCCCCAAATGAGGAAGGTGAGACAGAGAGA

GGAAAAGGAGAGNCNNAAGGATGAGNNNNCAACAAGGAGGAGGAGTGAGG
TAGAGATAAGGAGAAAGAGAGGAAGGGGCTGAGAGGNTGAGGGGGAGGGG
GTAGCGGAGTGGAANTAANTGGGGGGGNNNTAAGAGAGAAAGGAGGNNNG
GAGGGGAGGGAGACCATGTTTTTTTCGCAGAAAAAAGAAAGAGGTGGTTT
AAGGGGTGGAAACAAAGCTTAAATAATGTAATAGTGTTATACCCCCGGAC
GGGGAGGAAAATTTTTCAAAATTTTGGGGGGTTGGTTATTGGGCCCCCCT
TTTTTTAAAATTTATTGGAGCCCCTTGGGAAAAATTTTTTGGGGCAAAAA
CACTGGGGAAAAACTGTTTTGTTTTGATAAGAGGAAAACGTTAAGAGGGG
GAAAAGTCCAAAAAAAAAAATGGGGGGCTATTTGGGAGGTGGGGGGGGGG
GGGAGAAACAAAAAAAAAAGGGGGTTGTTGTGGGAGGTGTGTCGTGGGTT
GGAGATTTCTTTTTCCCCTCATAAAAATAAGTGTAAAAAGGAGGCGGGGG
TAAATATAAAAGGTGAACAACATAAATAAAATGATTAAAGAGGAGGGCGG
GGGTACNGCCGAGGAAGGGAGAAAACAAAAATTGTGGTGGGGGGTGTTCC
TCGCCCTCTCTCTTTCCGAGAGAAGAGAAGGGGGAGGTCCCACTCGCATA
AAGGAAGGGGAAGAAAAAGAAAGGGAAGAGGGGGTATTCGATCTCGGTGA
AAAAAAAAAGAAAATAATTATTTCCCTCTTCTTTCGGGTGGTTGGGAAAA
AGAAAAGAAAAGTAGAGTAGGTGGGAGAGAATAATAATAAGAAAGATAAC
ATCCATTCACAACTATAAGAAGTAATTTGGGTTGATGTGGCGCGGCTATC
TTTCGTTCAATAAAGTGGTGTGTCGTGTTTTATCTATCACATTGTTGTGT
GTGTGTGTGAGGGACATTGAGGAGGAGGTGTAGGN

Query= MSMg01no527_f01.b1 MSMg01no527_f01.b1 CHROMAT_FILE:
MSMg01no527_f01.b1 PHD_FILE: MSMg01no527_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:31 2005
         (671 letters)



>mm_chr13_44568709_44569779
          Length = 1071

 Score = 1249 bits (646), Expect = 0.0
 Identities = 652/654 (99%)
 Strand = Plus / Plus

                                                                       
Query: 18  ctgggtctcaggggggtagttagaatctgggtttatttaccatcttaataggggctggga 77
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 218 ctgggtctcaggggggtagttagaatctgggtttatttaccatcttaatagggactggga 277

                                                                       
Query: 78  agaggggcacttctgtgagaagggggagaagaggagagacacttagagaaaagcaaaaga 137
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agaggggcacttctgtgagaagggggagaagaggagagacacttagagaaaagcaaaaga 337

                                                                       
Query: 138 ccttttggaaagataaatggacccttcggaggagagatgggagatgtaatgtggctgtga 197
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ccttttggaaagataaatggacccttcggaggagagatgggagatgtaatgtggctgtga 397

                                                                       
Query: 198 taatatcagagcgtggtgctgatttctgctctccaaaaagagattagaattgcttctagg 257
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 taatatcagagcgtggtgctgatttctgctctccaaaaagagattagaattgcttctagg 457

                                                                       
Query: 258 gcagggatttatgacaattggagggtagaagctctgcttttaggcagataagacattatg 317
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gcagggatttatgacaattggagggtagaagctctgcttttaggcagataagacattatg 517

                                                                       
Query: 318 ggaatccaaatgccttcagctcaaaataacttttgtagaccaccgaggctttttctagac 377
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ggaatccaaatgccttcagctcaaaataacttttgtagaccaccgaggctttttctagac 577

                                                                       
Query: 378 tctttctctcagcctcggtctgcccatgcttggaaaccgagagaccacagctcctctcag 437
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tctttctctcagcctcggtctgcccatgcttggaaaccgagagaccacagctcctctcag 637

                                                                       
Query: 438 cattacagaatctccaaatggccactcaccagccagacgccaaaccagttcaactttttc 497
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 638 cattacagaatctccaaatggccactcaccagccagccgccaaaccagttcaactttttc 697

                                                                       
Query: 498 tgggcgagcaggatttcccttcatccctttcctttttctgaaacaccagctaagccctac 557
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tgggcgagcaggatttcccttcatccctttcctttttctgaaacaccagctaagccctac 757

                                                                       
Query: 558 ccagaggatcttttaaacaaagcatcggaagggcttatcttttgggtaccaacaacttgt 617
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ccagaggatcttttaaacaaagcatcggaagggcttatcttttgggtaccaacaacttgt 817

                                                                 
Query: 618 gctttgtccagggaacacaaagacttggttttccccaaatgaggaaggtgagac 671
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gctttgtccagggaacacaaagacttggttttccccaaatgaggaaggtgagac 871


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space:   701321
Effective search space used:   701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)