Query= MSMg01no529_c17.b1 MSMg01no529_c17.b1 CHROMAT_FILE:
MSMg01no529_c17.b1 PHD_FILE: MSMg01no529_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:01 2005
(652 letters)
>mm_chr13_95972009_95973060
Length = 1052
Score = 1228 bits (635), Expect = 0.0
Identities = 644/647 (99%)
Strand = Plus / Minus
Query: 5 gaattctcatgagatgcaatgttggagtgtggggcacagatgggagctgaaagatggaga 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gaattctcatgagagggaatgttggagtgtggggcacagatgggagctgaaagatggaga 792
Query: 65 agtgctatagagagtggctgtggggggcagccagatggctcagtgggtagagctgccagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 agtgctatagagagtggctgtggggggcagccagatggctcagtgggtagagctgccagc 732
Query: 125 ccaccaagctggtaggagaagagaacacagtgtcctatgttgttctctgacctccatgta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ccaccaagctggtaggagaagagaacacagtgtcctatgttgttctctgacctccatgta 672
Query: 185 tgtacatccatgtatatccatgtattgcacatacatggtcctaccactaaataaaatctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tgtacatccatgtatatccatgtattgcacatacatggtcctaccactaaataaaatctt 612
Query: 245 aaaaaaaaacttttagaagagtgactgactatatacatgcccaaaagaggtgatcttcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aaaaaaaaacttttagaagagtgactgactatatacatgcccaaaagaggtgatcttcaa 552
Query: 305 ggagaagtgacataagtgtgagtcactgaaggtgggggctggagcaagctgcctctattt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ggagaagtgacataagtgtgagtcactgaaggtgggggctggagcaagctgcctctattt 492
Query: 365 aggaatgggaagcaacactgggatttgaaaaatgcaggagattgaaagcagggcagttca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aggaatgggaagcaacactgggatttgaaaaatgcaggagattgaaagcagggcagttca 432
Query: 425 gtctgagaaacatttgctcagggcccaactaggtgtcagacactgtctatagaaatgaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gtctgagaaacatttgctcagggcccaactaggtgtcagacactgtctatagaaatgaat 372
Query: 485 aagatgatcacctccctagggaagcttctatgctcactggggtgtgggaatggcatacaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aagatgatcacctccctagggaagcttctatgctcactggggtgtgggaatggcatacaa 312
Query: 545 aaccacttttccatagctatggaatgcattgctgcagatgtggacacccatggtttctgt 604
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 311 aaccacttttccatagctatggaatgcattgctgcagatgtggacgcccatggtttctgt 252
Query: 605 gatcaggcatggctcatctggatcctcgatgtcagggtgttttatca 651
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gatcaggcatggctcatctggatcctcgatgtcagggtgttttatca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_c17.g1 MSMg01no529_c17.g1 CHROMAT_FILE:
MSMg01no529_c17.g1 PHD_FILE: MSMg01no529_c17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:01 2005
(686 letters)
>mm_chr13_95832178_95833263
Length = 1086
Score = 1251 bits (647), Expect = 0.0
Identities = 674/685 (98%), Gaps = 4/685 (0%)
Strand = Plus / Plus
Query: 1 tcatggataccagcttttgttgtgcaatcctagttccttaatttaaaactattggttgag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 tcatggataccagcttttgttgtacaatcctagttccttaatttaaaactattggttgag 264
Query: 61 cagcccatcctgtagctgggcataagagaggtaggcaaggcttcagctcccaggctgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagcccatcctgtagctgggcataagagaggtaggcaaggcttcagctcccaggctgggt 324
Query: 121 ttctgaaatggagactaagagggagagaaggaggggaaggctcatgccatgaggtatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttctgaaatggagactaagagggagagaaggaggggaaggctcatgccatgaggtatgtg 384
Query: 181 gatcatgagcgcatggccatgagagctggtctgctggagtaggaaaggcctacatggaac 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 385 gatcatgagcgcatggccatgagagctggtctgctggagtaggagaggcctacatggaac 444
Query: 241 ttggcaagtaatgtctcaggattattgacagggaggtagaaaaaacagcacagaggattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 445 ttggcaagtaatgtctcaggattattgacagggaggtagaaaaaacagcacagaggactg 504
Query: 301 atatctgcccagctcaggtgctttaaagcttattacaaaatataaaggttttgtgtcttt 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 505 atatctgcccagctcaggtgctttaaagcttattataaaatataaaggttttgtgtcttt 564
Query: 361 tatttggttgggaactacatggtctaaggtggagaagaaactccaaataatatttactgc 420
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatttgg----gaactacatggtctaaggtggagaagaaactccaaataatatttactgc 620
Query: 421 aactttaatctgatgggggcaccaatctgatggaggcaccaatctgatgggggcaccaat 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 621 aactttaatctgatgggggcaccaatctgatggaggtaccaatctgatgggggcaccaat 680
Query: 481 ctgatgggggcacgaatctgatggatgcaatgtttcagttgaggttctctcttcccaggt 540
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgatgggggcaccaatctgatggatgcaatgtttcagttgaggttctctcttcccaggt 740
Query: 541 gaccctagtttttgtcacattgatgaaaaataaccagtacagccatttaaaagaatgctt 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaccctagtttttgtcgcattgatgaaaaataaccagtacagccatttaaaagaatgctt 800
Query: 601 gctttgatgaagagacattttgatcaccgtttcaaacacaaatttacttgtactatcaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gctttgatgaagagacattttgatcaccgtttcaaacacaaatttacttgtactatcaat 860
Query: 661 tttttttctgtttcttctgccccac 685
|||||||||||||||||||||||||
Sbjct: 861 tttttttctgtttcttctgccccac 885
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
