Query= MSMg01no529_n09.b1 MSMg01no529_n09.b1 CHROMAT_FILE:
MSMg01no529_n09.b1 PHD_FILE: MSMg01no529_n09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:57 2005
(675 letters)
>mm_chr13_59580018_59581095
Length = 1078
Score = 1180 bits (610), Expect = 0.0
Identities = 658/676 (97%), Gaps = 5/676 (0%)
Strand = Plus / Plus
Query: 5 gaattcatacctataaccacgtcatgggaggaaagaaccaaacatcaaatttgtcctttg 64
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 205 gaattcatacctagaaccacgtcatgggaggaaagaaccaaacatcaaagttgtcctttg 264
Query: 65 acctccacacaaagcagtggcaggcgcacccaccttccaacaccagccccaca---tgca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 265 acctccacacaaagcagtggcaggcgcacccaccttccaacaccagccccacagtatgca 324
Query: 122 taaatcagtgttaggaaccttcacagtcaacagggaggtagggagctctgaaatgcatac 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 325 taaatcagtgttaggaaccttcacagtcaacagggaggtagggagctctgaaatgcacac 384
Query: 182 acagaactgatcacacaacagcaactgttcaacatgggcagcaaacacctgcgacagcat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acagaactgatcacacaacagcaactgttcaacatgggcagcaaacacctgcgacagcat 444
Query: 242 cctgttcatagcttttaaaagtccttaagtattgctgacataggcatttaaagatctgct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctgttcatagcttttaaaagtccttaagtattgctgacataggcatttaaagatctgct 504
Query: 302 gttgacttaatttgtaaagctctaaaaacgcttttaaaaatttattcacacacgtagata 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gttgacttaatttgtaaagctctaaaaacgcttttaaaaatttattcacacacgtagata 564
Query: 362 ttcaaactattcttcattaacttcgtcactgtctcttgtatgggcagataatggcaaatg 421
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcaaactattcttcattaacttcatcactgtctcttgtatgggcagataatggcaaatg 624
Query: 422 ctaagaactaagaaacatacaaaacagtttcttctctgaattggcagctaactgaagagg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctaagaactaagaaacatacaaaacagtttcttctctgaattggcagctaactgaagagg 684
Query: 482 tacgtatctctgtagtgagagtttggtttctttaggaacccagttacgttatatgaatat 541
||| |||| ||||||||||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 685 tacatatccctgtagtgagagtttggtttctttaagaacccagttatgttatgtgaatat 744
Query: 542 gtttttgttttattcccaggtgtgggacaagaggctgcttcacaacaggtgattatgatt 601
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 745 gtttttgttttattcccaggtgtgggacaagaggctgcttcacaacaggtgattgtgatt 804
Query: 602 tgctggctgtactagctggggtgtgatttttgccagctgcagagagtttaattctggaga 661
||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 805 tgccggctgcactagctggggtgtgatctttgccagctgcagagagtttaattctggaga 864
Query: 662 ct--ggggagggaata 675
|| ||||||||||||
Sbjct: 865 ctttggggagggaata 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1078
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1068
Effective search space: 710220
Effective search space used: 710220
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_n09.g1 MSMg01no529_n09.g1 CHROMAT_FILE:
MSMg01no529_n09.g1 PHD_FILE: MSMg01no529_n09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:57 2005
(647 letters)
>mm_chr13_59703627_59704673
Length = 1047
Score = 893 bits (462), Expect = 0.0
Identities = 471/474 (99%)
Strand = Plus / Minus
Query: 1 caaaattctcactacaaaccctatgggcataggatctagacaacaagggcagatcaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 caaaattctcactacaaaccctatgggcataggatctagacaacaagggcagatcaaaga 415
Query: 61 gccctcagaatcctccagagaaagggacagagaaaggacggagagcagtgacgggtgtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gccctcagaatcctccagagaaagggacagagaaaggacggagagcagtgacgggtgtgc 355
Query: 121 aatcacctcggaagcagttgcccttacaggaagaaacagccaatatcccagtcaaaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aatcacctcggaagcagttgcccttacaggaagaaacagccaatatcccagtcaaaaatg 295
Query: 181 tgtgtggaactgaatttacctattacccgagagtaacagaagaggaaagatcaaggacta 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 294 tgtgtggaactgaatttacctattaccctagagtaacagaagaggaaagatcaaggacta 235
Query: 241 cttagaaatcgaagcaaatgagaaagttgtcacctgtggtagtatgagtgaaaatggctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 cttagaaatcgaagcaaatgagaaagttgtcacctgtggtagtatgagtgaaaatggctc 175
Query: 301 ccacagacccactggagtaacactattagaaggtgtggccatgcttgaagaagcctgtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ccacagacccactggagtaacactattagaaggtgtggccatgcttgaagaagcctgtta 115
Query: 361 tagtgggtgggcttggaggtttcagaagcctgagctgagcccagtgtcactttctcttcc 420
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 114 cagtgggtgggcttggaggtttcagaagcttgagctgagcccagtgtcactttctcttcc 55
Query: 421 tgctacctgtggatctatatatagaactctgctcttctccagcactgtgtctgc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tgctacctgtggatctatatatagaactctgctcttctccagcactgtgtctgc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
