CGGTGTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCCAAGACAGTCAGGGCTACATAAAGAAAACCTGTCTC
AGAAAACACACACAAATAAATGAATGAGTACATAAATAAATACACATATT
AACATCAACTCATAAATATTAGATGATTTTTAATTCACTATTTTCTCCAG
TAGACAGATCATCATAGTAGAAAATAAGCAGATAAACATCAGAATTAAAC
GATGTCCTATATCAAATATACTAAAAAGATATCTATAGGACATTCCATCC
AAACAGCAAGGAATATATATCCTATTCATCAACAAATAATCTAATGGGAA
ACTAGGAAAAAAGGGGAGTTATCTAATTAGGGAAAAAACAGGAAGATGAA
TACAAAAAAGGACAGAGAAGACTAAAACAGCAGTAAGGTCTAAAAAAAAT
TATTAGGAATTGTAATATTAATTAACCTAAACCTTTTACAGAAATTATTA
ATTAACCTAATTATTTACCTAAGAATCCATAATATAAATAAATCTGTATA
TGTAAATATGCATACATAGTTCAAATGAAAATTTCTTAACTGATCTAGTA
TCACCTAACAACAACAACAGAAACAACAACAAGCATAAGAAACCCTTTCT
TAATGAGGTACATTTACACAATGGAGTACTATTCAGCTATTAAAAAGAAT
GAATTTATGAAATTCCTAGGCAAATGGATGTACCTGAAGAGCATCATCCT
GAGTGAGGTAACCCAATCN

CCTTTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGATCTTTCCAAGACATT
AGTCATGAATGGGTGTTGGATCTTGTCAAATGCTTTCTCAGCATCTAACG
AGATGATCATGTAGTTTTTGTCTTTAAGTTTGTTTATATAGTGGATTACG
TTGTTGGATTTCCGTATATTAAACCATCCCTGCATCCCTGGGATGAAACC
TACTTGATCATGGTGGAAGATTGTTTTGATGTGATCATGGATTCGGTTTG
TGAGAATTTTACTGAGTATTTTTGCATTAATATTCATAAGGTAAATTGGT
CTGAAATTCTCTTTCTTTGTTGGGTCTTTATGTGGTTTAGGTATCAGAGT
AATTGTGGTTTCATAAAATGAATTGGGTAGAGTAACTTCTGTTTCTATTT
GGTGGAATAGTTTGAGGAGTATTGGAATTAGGTCTTCTTTGAAGGTCTGA
TAGAACTCTGCACTAAACCCATCTGGGCCTGGGTTTTTTTTGGATAGGAG
ACTACTAATGACTGCTTCTATTTCATTAGGGGATATGGGATTGTTTAGAT
CGTTAATCTTGATCCTGATTTAACTTTTGTACCTGGAATCTGTCTAGAAT
ATTGTCCACTTCCTCCAGGTTTTCCCGTTTTGTTGAGCACCACCTTTCTA
AATTAGATCTGAGGATGTTTTGTATTTCCTCCAGTTCCGTCGTTATGTTT
CCCTTTTCCT

Query= MSMg01no531_a06.b1 MSMg01no531_a06.b1 CHROMAT_FILE:
MSMg01no531_a06.b1 PHD_FILE: MSMg01no531_a06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:31 2005
         (686 letters)



>mm_chr13_15242500_15243585
          Length = 1086

 Score = 1288 bits (666), Expect = 0.0
 Identities = 677/682 (99%), Gaps = 3/682 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaagacagtcagggctacataaagaaaacctgtctcagaaaacacacacaaata 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaagacagccagggctacataaagaaaacctgtctcagaaaacacacacaaata 264

                                                                       
Query: 65  aatgaatgagtacataaataaatacacatattaacatcaactcataaatattagatgatt 124
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatgaatgagtacatacataaatacacatattaacatcaactcataaatattagatgatt 324

                                                                       
Query: 125 tttaattcactattttctccagtagacagatcatcatagtagaaaataagcagataaaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttaattcactattttctccagtagacagatcatcatagtagaaaataagcagataaaca 384

                                                                       
Query: 185 tcagaattaaacgatgtcctatatcaaatatactaaaaagatatctataggacattccat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcagaattaaacgatgtcctatatcaaatatactaaaaagatatctataggacattccat 444

                                                                       
Query: 245 ccaaacagcaaggaatatatatcctattcatcaacaaataatctaatgggaaactaggaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccaaacagcaaggaatatatatcctattcatcaacaaataatctaatgggaaactaggaa 504

                                                                       
Query: 305 aaaaggggagttatctaattagggaaaaaacaggaagatgaatacaaaaaaggacagaga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaaaggggagttatctaattagggaaaaaacaggaagatgaatacaaaaaaggacagaga 564

                                                                       
Query: 365 agactaaaacagcagtaaggtctaaaaaaaattattaggaattgtaatattaattaacct 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agactaaaacagcagtaaggtctaaaaaaaattattaggaattgtaatattaattaacct 624

                                                                       
Query: 425 aaaccttttacagaaattattaattaacctaattatttacctaagaatccataatataaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaccttttacagaaattattaattaacctaattatttacctaagaatccataatataaa 684

                                                                       
Query: 485 taaatctgtatatgtaaatatgcatacatagttcaaatgaaaatttcttaactgatctag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taaatctgtatatgtaaatatgcatacatagttcaaatgaaaatttcttaactgatctag 744

                                                                       
Query: 545 tatcacctaacaacaacaacagaaacaacaacaagcataagaaaccctttcttaatgagg 604
           |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||
Sbjct: 745 tatcacctaacaacaacaacagaaacaacaa---gcataagaaaccctttcttaatgagg 801

                                                                       
Query: 605 tacatttacacaatggagtactattcagctattaaaaagaatgaatttatgaaattccta 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tacatttacacaatggagtactattcagctattaaaaagaatgaatttatgaaattccta 861

                                 
Query: 665 ggcaaatggatgtacctgaaga 686
           ||||||||||||||||||||||
Sbjct: 862 ggcaaatggatgtacctgaaga 883


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space:   727376
Effective search space used:   727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)