NCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTACATGTCTGTGGAAAGAGACATCTGGAAGCAATAGTGCTTTG
ACTCGAATTCTGAAAAGAAAGCTTTCTCTAAAAATGGCAAAAGTGTTGCA
TCATAAATTGAGTTGTCATTGAATTAGCAGAGTCTGACTTTTCTGAATAT
TTCCTATTAGTTTAGAATTCAAAATACTTAGCTAGTACCAGAAGATCACT
GCATACATCAAAACAGAAGAAAATATATTCCCTTTTTGCTTCTAACCAAC
TATGTAGATTATAAACCCAAGTGTTACATGATAATCCTGGGGCAAGTTAA
TTCACCATCCTAATAACTTATATTTATAGATGTAGAATTGCAGAAAATAT
TTTGATTTGAAATGGATCTCACAGCTTTGATGATACCTCAAATATTTAAG
CCATGATCTCCAAGATAGATTTGTCCAGTAGTAAGCTTTAATTATAATCT
AACTCCCTCCCACCATCCATTTTCTGCTTATTTACTCTTCTAGCTGACAA
AAAGACTGGAAAACAACTGGCCACTCCAGTGTTTCCAGAGCTCTGCTTAT
TCATCACTGTTCACCAGTGCTGCTAAGGTCCCAGCACTGCTGAACACTGG
CACATCCAGCCAAATGGAAAAGCCCCCCACACCCAGACATACCCAGATGT
CTGTGCCAGCACCTTTGGGTGCAGCTGAAGCCACAGACAGGTTAGAA

CCCATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATGAGCCCTTCCTCCATTCATTC
AGGGACTTGGGCTGACTTGATAGTGTGCAGGTCTTATGCATACAGTCACA
GCCATTGTAGTTGGTTCACTACTTCCATTGAATGGGTTCTGGAAAGCTAA
CTCAGGCAGACAGGTTTGGTAGGATACACCTCTATTCATTGAACTATCCT
GCTGCTAGCCCCTACCTGTAAATTTTAAAACAAGCTTGTTTACATTCACA
GATAACCTTGCTGAGGGTTTGGTAGAAATTTCATTGGCTGTAGGGATCAA
TTTTGGTGTTCTTTGATTTCTTCCATTTTATAATTTCAGCCACAGATCCT
GGTTAAGATTTTAGATGCAATAAATGTACAAATAAGCACAATTAATGATA
AGCAATTGCACCACATTTTAAATTTTGGTGTCTATGTGTTCATGGCTACT
GTATAGAAAGACTGCTTTTGAAGGCTAACTTTGTATTCTTTGACCCTGCT
GAACACAGTCATTATTCCTAGGAGTGTTTTTGTGAACTCCTTGGGACTTA
GGGAATATTCTTTTGTTCTTAACAGCATGATGACTGTAGGTGCTAGAAGT
TTTAGTGTTGTCTTAAATAAGAATGGTGAGCGTCTGTTGCTTGTAACCTC
AGCACTGTAGAGACCAAGGTAAAAGGATTGCTATGAGTTCAATGCCAACT
CAAGTTACN

Query= MSMg01no531_e20.b1 MSMg01no531_e20.b1 CHROMAT_FILE:
MSMg01no531_e20.b1 PHD_FILE: MSMg01no531_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:53 2005
         (550 letters)



>mm_chr13_105936319_105937269
          Length = 951

 Score =  988 bits (511), Expect = 0.0
 Identities = 541/551 (98%), Gaps = 1/551 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acatctggaagcaatagtgctttgactcgaattctgaaaag-aaagctttctctaaaaat 59
           ||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||
Sbjct: 751 acatctggaagcaatagtgctttgactcgaattctgaaaagaaaaacattctctaaaaat 692

                                                                       
Query: 60  ggcaaaagtgttgcatcataaattgagttgtcattgaattagcagagtctgacttttctg 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ggcaaaagtgttgcatcataaattgagttgtcattgaattagcagagtctgacttttctg 632

                                                                       
Query: 120 aatatttcctattagtttagaattcaaaatacttagctagtaccagaagatcactgcata 179
           ||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 631 aatatttcctattggtttagaattcaaaatacttaactagtaccagaaaatcactgcata 572

                                                                       
Query: 180 catcaaaacagaagaaaatatattccctttttgcttctaaccaactatgtagattataaa 239
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 571 catcaaaacagaagaaaatatattcccttttagcttctaaccaactatgtagattataaa 512

                                                                       
Query: 240 cccaagtgttacatgataatcctggggcaagttaattcaccatcctaataacttatattt 299
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 511 cccaagtgttacatgataatcctggggcaagttaattcaccaccctaataacttatattt 452

                                                                       
Query: 300 atagatgtagaattgcagaaaatattttgatttgaaatggatctcacagctttgatgata 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 atagatgtagaattgcagaaaatattttgatttgaaatggatctcacagctttgatgata 392

                                                                       
Query: 360 cctcaaatatttaagccatgatctccaagatagatttgtccagtagtaagctttaattat 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cctcaaatatttaagccatgatctccaagatagatttgtccagtagtaagctttaattat 332

                                                                       
Query: 420 aatctaactccctcccaccatccattttctgcttatttactcttctagctgacaaaaaga 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 331 aatctaactccctcccaccatccattttctgcttatttactcttctagctgacaaaaagc 272

                                                                       
Query: 480 ctggaaaacaactggccactccagtgtttccagagctctgcttattcatcactgttcacc 539
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 271 ctggaaaacaactggccactccagtgtttccagagctctgcttatgcatcactgttcacc 212

                      
Query: 540 agtgctgctaa 550
           |||||||||||
Sbjct: 211 agtgctgctaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 951
Length adjustment: 10
Effective length of query: 540
Effective length of database: 941
Effective search space:   508140
Effective search space used:   508140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)