TTAATTACATAATTAAGCGTTGTGTGGTAAACGTCAAACCCATTTTTCTC
TTCTAGGTGGCTATTGCTGAAAATAATCTGGGGGTTGCCTGGCGTGGGGA
GCCACGCGCACGAAGTTGAAGTTTTATTGACGTAATCCTGTCGATTGTAC
AATAAGCATAGCAGGAGCATAAAAGAAGTTATTACGCTTGGGCGGTTTCC
GCTTCAGCTATCGGCCTAAGTTGTGTCCTGGCGCGTGTGCGGTGTTCGAT
GAAAATTATGAATGAGGTAACATAATTATATAATTGTCTATAATGTGTAC
AACCCGGACAGAGGCCAACTTATACACAAATACTAACTAAATAACATATA
GGGCATTTAGGAATCTTGGTGCCGGGAAATGGTTGCGTCAGTGTCTGGGC
GCCCCGTCATCTCTACAGGGCTATAAGGACCCGATACCGGCGCCAATAAC
TCACGCCAAACAACCCTCAACATATTTCTATACAATCCAATATACTCTCT
ACAACCTNCTAGTCAGCTATTAGGTGCTGTCATATCCTCCCGGATCTTAC
CTCTTCATAGCAACCCTCAACTCCAGATAGAGATCCTTAGAAGATAANNA
AGCCGAGNGAGAGCCAGTAATGAAAAGCAGAGAGNTAANNGGGAGGGGCA
GAAGGGGAGAGNAGGAGCCAGTGCGATGGTAAGCAAAGNAGCTGTGGGAT
GCGGAGNTGCAGNTNAANNGTCGNNNATGCNNGATNGACCGNNGNNNANT
NNTACCNNGAGNNNGNGTANGCAGGNTTNCAAANGNNNNNTCTNNGNGNT
NNNACGNCNGNGAANCCNNGGNGCTAGGNGGAGCCGGNGAGGTGNNGGGT
CANNAGTCNANN

NNNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTCTGTGTGATCTGCAA
ACCAAATAAATGGCAGTCACATAGAATGTGCTGGAACAACAATTATAAGA
ACAGTGGAGGAGGAGCAACCCTTGTAGATGATGATTGGAAAGTCATAAAA
CTACACAATTGATTAAACTATAGTGAAAATGACCCTCTCATAAGGCTCAA
CATATAAATAATCTCTCCATAGTGGACTCTGCTTTCCACTTATTTTAATG
TAAACATAATGGCCAGATTCAAAAGTCAAATTTGAATGTTTTTGGAAAGT
AAACATTATGAGGGAGAATGTTTTATTTTTTAACTTCACAATGCTCTTTT
ATTTCAATACTCTTTTTTTTTAAAAAATGTCTTTGAATGTGTTTGCTAAA
ATCTGACACCCACACACAATGCAGAATAGCAGAAAGGACTAGAGTTCACA
GTATCTCAGGGATACGGGCTTGTGTCAAATAACACTATAATCCTTTTAAT
GTAAAATAATCTCATGTGTGAATACTGTATTACATTTATCCCTTCCTCTC
CTCTTTCCAGATCCAGCCATGTTTTTCTGAGCCCTGCTCCCTTTCACATT
CATGGCCTCTTTTCTTTTANTGTCTGTGTGTGTGTGTGTGTGTGTGTGTA
CAACCTGCTAAATTTATTTACTGCCACAAATGTGTGTGTGTGTGTGTGTG
T

Query= MSMg01no532_a08.g1 MSMg01no532_a08.g1 CHROMAT_FILE:
MSMg01no532_a08.g1 PHD_FILE: MSMg01no532_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:50 2005
         (669 letters)



>mm_chr13_118892241_118893310
          Length = 1070

 Score = 1274 bits (659), Expect = 0.0
 Identities = 668/672 (99%), Gaps = 3/672 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtctgtgtgatctgcaaaccaaataaatggcagtcacatagaatgtgctggaacaacaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtctgtgtgatctgcaaaccaaataaatggcagtcacatagaatgtgctggaacaacaa 260

                                                                       
Query: 61  ttataagaacagtggaggaggagcaacccttgtagatgatgattggaaagtcataaaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttataagaacagtggaggaggagcaacccttgtagatgatgattggaaagtcataaaact 320

                                                                       
Query: 121 acacaattgattaaactatagtgaaaatgaccctctcataaggctcaacatataaataat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacaattgattaaactatagtgaaaatgaccctctcataaggctcaacatataaataat 380

                                                                       
Query: 181 ctctccatagtggactctgctttccacttattttaatgtaaacataatggccagattcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctccatagtggactctgctttccacttattttaatgtaaacataatggccagattcaa 440

                                                                       
Query: 241 aagtcaaatttgaatgtttttggaaagtaaacattatgagggagaatgttttatttttta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagtcaaatttgaatgtttttggaaagtaaacattatgagggagaatgttttatttttta 500

                                                                       
Query: 301 acttcacaatgctcttttatttcaatactctttttttttaaaaaa-tgtctttgaatgtg 359
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 acttcacaatgctcttttatttcaatactctttttttttaaaaaaatgtctttgaatgtg 560

                                                                       
Query: 360 tttgctaaaatctgacacccacacacaatgcagaatagcagaaaggactagagttcacag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgctaaaatctgacacccacacacaatgcagaatagcagaaaggactagagttcacag 620

                                                                       
Query: 420 tatctcagggatacgggcttgtgtcaaataacactataatccttttaatgtaaaataatc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatctcagggatacgggcttgtgtcaaataacactataatccttttaatgtaaaataatc 680

                                                                       
Query: 480 tcatgtgtgaatactgtattacatttatcccttcctctcctctttccagatccagccatg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcatgtgtgaatactgtattacatttatcccttcctctcctctttccagatccagccatg 740

                                                                       
Query: 540 tttttctgagccctgctccctttcacattcatggcctcttttcttttantgtctgtgtgt 599
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 741 tttttctgagccctgctccctttcacattcatggcctcttttcttttagtgtctgtgtgt 800

                                                                       
Query: 600 gtgtgtgtgtgtgtgtgt--acaacctgctaaatttatttactgccacaaatgtgtgtgt 657
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtgtgtgtgtgtgtgtgtgtacaacctgctaaatttatttactgccacaaatgtgtgtgt 860

                       
Query: 658 gtgtgtgtgtgt 669
           ||||||||||||
Sbjct: 861 gtgtgtgtgtgt 872


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1070
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1060
Effective search space:   698540
Effective search space used:   698540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)