Query= MSMg01no532_d09.b1 MSMg01no532_d09.b1 CHROMAT_FILE:
MSMg01no532_d09.b1 PHD_FILE: MSMg01no532_d09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:04 2005
(605 letters)
>mm_chr13_12700754_12701762
Length = 1009
Score = 1035 bits (535), Expect = 0.0
Identities = 588/607 (96%), Gaps = 8/607 (1%)
Strand = Plus / Plus
Query: 5 gaattccttcagtaagggaagtattctgaagttggtactcactggattaatttttaaata 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttcagtaagggaagtattctgaagttggtactcactggattaatttttaaata 264
Query: 65 cgttagggtgtgttggtgtgtgcatagtgacatcaccatgacatctgaggactgtggaga 124
|||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||
Sbjct: 265 cgttagggtgtgttggtgtgtgcacagcgacatcaccatgacatctgaggactgtg--ga 322
Query: 125 ctgtgggactgtttggtgaccctggtgatgaatctgtaggaggctgtctgcccgttctgt 184
|||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||
Sbjct: 323 ctgtgggactgtttggtgaccctgatgatgaatctgtaggaggctatctgccggttctgt 382
Query: 185 caccggtgcttggggg-aattcaagcactgcttacattgtgagattgcttgtgacaaaac 243
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 caccggtgcttgggggaaattcaagcactgcttacattgtgagattgcttgtgacaaaac 442
Query: 244 acttgctgtttgtctgtgtctcatcacctgctgtaaaaatctagcactcgacagcaagcc 303
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 443 acttgctgtttgtctgtgtctcatcacctgctgtaaaaatctagcacttgacagcaagcc 502
Query: 304 tgactgaaacgattgtacctggtgccataacaatgtgaagaggaagtattttcattggtg 363
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 503 tgactgaaaagattgtacctggtgccataacaatgtgaagaggaagtgttttcattggtg 562
Query: 364 gcctgtatattcctttagtggcatccatgttagactaaaatggcccatgctcagtacccc 423
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 563 gcctgtatattcctttagtggcatccatgttatactaaaatggcccatgctcagtactcc 622
Query: 424 tcttgttttggattatgtggaggatcagcc-aa--acaagataatcaattttgaaacttg 480
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 623 tcttgttttggattatgtggaggatcagccgaacaacaagataatcaattttgaaacttg 682
Query: 481 ccaactcagatgttggcccctgtattttgtgtatgaaatgctgtgctgtgtctct-cgac 539
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 683 ccaactcagatgttagcccctgtattttgtgtatgaaatgctgtgctgtgtctcttcgac 742
Query: 540 c-tgcctaggtgccaccatgtgtaaggagggacaactgtgctggtcttcctcagcactgc 598
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cctgcctaggtgccaccatgtgtaaggagggacaactgtgctggtcttcctcagcactgc 802
Query: 599 ttctcag 605
|||||||
Sbjct: 803 ttctcag 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1009
Length adjustment: 10
Effective length of query: 595
Effective length of database: 999
Effective search space: 594405
Effective search space used: 594405
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_d09.g1 MSMg01no532_d09.g1 CHROMAT_FILE:
MSMg01no532_d09.g1 PHD_FILE: MSMg01no532_d09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:04 2005
(569 letters)
>mm_chr13_12755842_12756810
Length = 969
Score = 717 bits (371), Expect = 0.0
Identities = 371/371 (100%)
Strand = Plus / Minus
Query: 1 gatgtcgtgtgctctgagatggagcttaggcagatgtttgtcactggacagggagcatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gatgtcgtgtgctctgagatggagcttaggcagatgtttgtcactggacagggagcatag 312
Query: 61 gtagagattggtctgggaccttttactgttaacagttagcctggggcagattcttcctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gtagagattggtctgggaccttttactgttaacagttagcctggggcagattcttcctgt 252
Query: 121 agattcctgtggatgctcagacagggaagggcactgggaaagttccccgtgtgttatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agattcctgtggatgctcagacagggaagggcactgggaaagttccccgtgtgttatggt 192
Query: 181 ttgaatgtaaatgtccccccactggctcacatgtttaatcatttggtccccataggggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttgaatgtaaatgtccccccactggctcacatgtttaatcatttggtccccataggggac 132
Query: 241 cactatctggggacagtgtgagactttggggaggtagagctttgttggaggtggtaggtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 cactatctggggacagtgtgagactttggggaggtagagctttgttggaggtggtaggtc 72
Query: 301 atgatgggaagggaggttttgaaggttctctgtgcttcgagtctagtctctgctctctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atgatgggaagggaggttttgaaggttctctgtgcttcgagtctagtctctgctctctga 12
Query: 361 gtgacgtaagc 371
|||||||||||
Sbjct: 11 gtgacgtaagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
