MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-532I01
Chromosome	13 (Build37)
Map Location	35,640,400 - 35,640,698
singlet/doublet	singlet
Overlap gene	none
Upstream gene	1300014I06Rik, D0H6S2654E, EG432746, LOC666677, Prpf4b, 4933417A18Rik, LOC666697, 1810022C23Rik, Peci
Downstream gene	Cdyl, Rpp40, LOC100041568, Ppp1r3g, Lyrm4, LOC100042773, Fars2, LOC100041590
Link	Open Mouse BAC browser

Click to get alignment info.

name	1300014I06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66895 MGI:1914145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D0H6S2654E (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108161 MGI:1351640
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 3 ESTs, 10 Proteins pseudo : _no_value

name	EG432746 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432746 MGI:3644013
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC666677 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666677
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 6 Proteins pseudo : _no_value

name	Prpf4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19134 MGI:109584
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933417A18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66761 MGI:1914011
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666697 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins pseudo : _no_value

name	1810022C23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69123 MGI:1916373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Peci (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23986 MGI:1346064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdyl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12593 MGI:1339956
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpp40 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208366 MGI:1346084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041568 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Ppp1r3g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76487 MGI:1923737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 2 Proteins

name	Lyrm4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380840 MGI:2683538
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042773 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042773
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 381 ESTs, 8 Proteins

name	Fars2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69955 MGI:1917205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100041590 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041590
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	1300014I06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115292444 GeneID:66895 MGI:1914145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1300014I06 gene transcript_id : NM_025831.3

name	EG432746 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94394778 GeneID:432746 MGI:3644013
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG432746 transcript_id : XM_484242.3

name	Prpf4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956073 GeneID:19134 MGI:109584
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PRP4 pre-mRNA processing factor 4 homolog B (yeast) transcript_id : NM_013830.1

name	4933417A18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118403291 GeneID:66761 MGI:1914011
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933417A18 gene transcript_id : NM_025750.2

name	1810022C23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387253 GeneID:69123 MGI:1916373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810022C23 gene transcript_id : NM_026947.4

name	Peci (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755025 GeneID:23986 MGI:1346064
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase transcript_id : NM_011868.1

name	Cdyl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129852 GeneID:12593 MGI:1339956
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromodomain protein, Y chromosome-like transcript_id : NM_009881.2

name	Rpp40 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801791 GeneID:208366 MGI:1346084
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribonuclease P 40 subunit (human) transcript_id : NM_145938.3

name	LOC100041568 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263941 GeneID:100041568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100041568 transcript_id : XM_001476595.1

name	Ppp1r3g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263943 GeneID:76487 MGI:1923737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 2 Proteins product : protein phosphatase 1, regulatory (inhibitor) subunit 3G transcript_id : XM_127272.7

name	Lyrm4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113681250 GeneID:380840 MGI:2683538
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LYR motif containing 4 transcript_id : NM_201358.2

name	LOC100042773 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263966 GeneID:100042773
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 381 ESTs, 8 Proteins product : similar to transmembrane emp24 domain-containing protein 10 transcript_id : XM_001478799.1

name	Fars2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85719314 GeneID:69955 MGI:1917205
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phenylalanine-tRNA synthetase 2 (mitochondrial) transcript_id : NM_024274.2

name	Fars2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85719321 GeneID:69955 MGI:1917205
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phenylalanine-tRNA synthetase 2 (mitochondrial) transcript_id : NM_001039189.1

name	1300014I06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115292445 GeneID:66895 MGI:1914145
definition	GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66895 protein_id : NP_080107.3

name	EG432746 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94394779 GeneID:432746 MGI:3644013
definition	codon_start : 1 product : hypothetical protein protein_id : XP_484242.3

name	Prpf4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956074 CCDS:CCDS26448.1 GeneID:19134 MGI:109584
definition	GO_component : GO:0005694 - chromosome [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence ISS]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation note : pre-mRNA protein kinase product : PRP4 pre-mRNA processing factor 4 homolog B protein_id : NP_038858.1

name	4933417A18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118403292 GeneID:66761 MGI:1914011
definition	codon_start : 1 product : hypothetical protein LOC66761 protein_id : NP_080026.2

name	1810022C23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312210 CCDS:CCDS26449.1 GeneID:69123 MGI:1916373
definition	GO_function : GO:0016853 - isomerase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC69123 protein_id : NP_081223.1

name	Peci (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755026 CCDS:CCDS26450.1 GeneID:23986 MGI:1346064
definition	GO_component : GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0000062 - acyl-CoA binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0004165 - dodecenoyl-CoA delta-isomerase activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0007031 - peroxisome organization and biogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation function : catalyzes the isomerization of peroxisomal 3-cis- and 2-trans-enoyl-CoAs product : peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase protein_id : NP_035998.1

name	Cdyl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753398 GeneID:12593 MGI:1339956
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : chromodomain protein, Y chromosome-like protein_id : NP_034011.1

name	Rpp40 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543592 CCDS:CCDS26451.1 GeneID:208366 MGI:1346084
definition	GO_component : GO:0005655 - nucleolar ribonuclease P complex [Evidence ISS] GO_function : GO:0004526 - ribonuclease P activity [Evidence ISS] [Evidence IEA] GO_process : GO:0001682 - tRNA 5'-leader removal [Evidence ISS] codon_start : 1 exception : mismatches in translation note : ribonuclease P1 product : ribonuclease P 40kDa subunit protein_id : NP_666050.2

name	LOC100041568 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263942 GeneID:100041568
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476645.1

name	Ppp1r3g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263944 GeneID:76487 MGI:1923737
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : protein phosphatase 1, regulatory (inhibitor) subunit 3G protein_id : XP_127272.6 transl_except : (pos:36060821..36060823,aa:OTHER) transl_except : (pos:36060998..36061000,aa:OTHER) transl_except : (pos:36061232..36061234,aa:OTHER) transl_except : (pos:36061298..36061300,aa:OTHER) transl_except : (pos:36061304..36061306,aa:OTHER) transl_except : (pos:36061307..36061309,aa:OTHER)

name	Lyrm4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41235733 GeneID:380840 MGI:2683538
definition	codon_start : 1 product : cDNA sequence BC034664 protein_id : NP_958746.1

name	LOC100042773 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263967 GeneID:100042773
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478849.1

name	Fars2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22267456 CCDS:CCDS26453.1 GeneID:69955 MGI:1917205
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; phenylalanine-tRNA synthetase 1 (mitochondrial) product : phenylalanine-tRNA synthetase 2 (mitochondrial) isoform 1 protein_id : NP_077236.1

name	Fars2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85719322 CCDS:CCDS26454.1 GeneID:69955 MGI:1917205
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; phenylalanine-tRNA synthetase 1 (mitochondrial) product : phenylalanine-tRNA synthetase 2 (mitochondrial) isoform 2 protein_id : NP_001034278.1

name	D0H6S2654E (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:108161
definition	number : 1 pseudo : _no_value

name	D0H6S2654E (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:108161
definition	number : 2 pseudo : _no_value

name	LOC666697 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666697
definition	number : 1 pseudo : _no_value

name	LOC666697 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666697
definition	number : 2 pseudo : _no_value

name	LOC666677 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263940 GeneID:666677
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 6 Proteins product : similar to ribosomal protein S4, X-linked pseudo : _no_value transcript_id : XR_032738.1

name	LOC100041590 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263945 GeneID:100041590
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to interleukin 19 pseudo : _no_value transcript_id : XR_032856.1

clone name	MSMg01-429O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504E12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-126O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283E20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-532I01.T7 (MSMg01no532_i01.b1)	MSMg01-532I01.TJ (MSMg01no532_i01.g1)
ACC	AG600646	AG600647
length	809	1,119
length of high quality (start - end)	302 (54 - 355)	---
definition	CHROMAT_FILE: MSMg01no532_i01.b1 PHD_FILE: MSMg01no532_i01.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:09:26 2005	CHROMAT_FILE: MSMg01no532_i01.g1 PHD_FILE: MSMg01no532_i01.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:09:26 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NAAAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XCGCGGAATTCTTACAGCATTTTCTGGAAATGCCTCATTTTGTTCCAGGA AGGCTGCTATGAGGCAAGAAAAAGCTGGTTGTAAACGCTTTACTCGGGGA CAAAGGACAAGTTCAAGTTGTTCCTGTCTTACCACATTGACAATAGAAAC ATAACAATTACTGCTTGTAGCCACCTCACCACCCCAGCACTCCCTTTGAC CTCTTAATAAGCCTTTCCAGTCTCATTATCTCTAGATTCAACTTCCCCTA GACCAGTCTCTCTGTACAATTACACTGCCTCAAGACACTNGGAGAGGAAG CCCCTGGCTCCCNTTTTAAATGTAATTTAGTGCTTTGGTTTTTTAAAAAA AAGGTTTAAAAAAAATTAAATAAAAGCCCAAAAAAATTTCTCCCCCATTT TTTTTTTATATAACCACATTTACACTTATTATTTACTCTTTTTAATTAAT TCTTTCCCCCTCACTTATATATTTCAATTTTCTATTTTTTTTATTCTTTA TTCTATCATTTCATCTTATCAATTTTTATTTTATCAAATTTTACTTTATT CTCTTTTTTTTATTCTTTTTATTATTTAATTATTTATCTATTTAATCTTT TTTTTCCTCACTTATTATCCAATTTAAATTTCACACTCTACTTTATTTAT AAATATTTGCTCCTCTATTAATAGAACTATATCTTTCTTTTTTTTTATCC GCAATTATTTTAAGTTCTTTTTTATTTTCTTATTTCCGATTTTTTTTTTC TAATCCTTG	NCCCCTTTTTTAANNNNNNNNNNNNNNNNNNNNNNCCCCCCNCCCCCTTT CCCCCCATNNNNNNNNCNCNNNCCCCAAAAANNNTTTTCTCCCCCCACNC AACAATTNCCCCAAACANNNNNNTNNNNNNAAAAANAANNNNNCNNNAAN ACCCCCCCCCAAAAAAAACCCACTCCCCCCCCACCCCNCCCCNAAAACAC NCCANNCNNCCNNNCCCCCCCCCCCCCCCCCCCACCCCCNGCAACACCNC NACCCACNNCCCNAAANAAAACCATCCCCNNNNCCCNCNACAAAAACCCA CCTCCCCCCCCCCCNAAAAAAAACCCCCTCNCCANAANNAANAANCCTAT TTTATCNCCATTTTTATTTCATCTAANNNNCACCNTNNNTCCNNCCNNNT CNNNNNNNNNNNNNNNCNCNCCCCCCCCCCCCCCCCACCCTCTCGGGGNN NNNNNNNNNNNNNTNNNNNTNTTNTNATTNTTTTTTTTTTATGTTTTTCT GTTTTTTGTCGGGGNTTAGGGGNAAGGGGGGGGCGGTCGGGGTGGGGTGT TTTTTATNNNNNNGNNGTCGNNNNNNNNNNNNTNTTNNNNNNNTNTNNTN NTTTTTTTGTGGTGGTGGTGTGGGGTGGCGNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATNNNNNNN ANTTNTTANNNNNNNNNNNNNNNNNANANNNNNNNNNNNNNNNNNNNNNN NNNNTNTNNNNNNNNATTTTTATTTTTGTTATATGTGTATGTTTGTTTTT CTCTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNANNNANNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNTN TNNNTNNNNNNNNNNNNTTTTNNNNAATNNATNNNNNNNTATTTTTNNNN NNNAANTTTNNNNNNNNNNTTTNANTTTATTTNTTNNTNNTANNNNTATA TAATTTTTAANANATTATTTATGTGTAGATGGTTGTGGGCGTTNAGGGTT GGTGTGGAGGGGGTGTGGG
quality values	Open. Hide. 0 3 7 7 6 6 6 8 15 11 9 9 9 10 11 22 26 29 28 25 20 20 32 25 17 9 9 9 21 21 37 28 28 28 25 23 21 25 11 9 9 9 9 9 9 9 8 8 8 8 10 11 14 23 18 27 27 31 31 36 33 59 33 33 33 28 28 18 17 12 10 10 10 11 11 16 16 18 28 24 33 33 33 37 43 43 59 59 59 59 59 59 59 50 50 50 47 47 47 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 68 68 50 50 50 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 59 59 57 57 57 57 54 57 57 57 57 57 59 59 59 59 59 59 59 57 57 57 59 59 59 57 68 68 68 68 68 68 68 57 57 68 68 68 57 59 59 59 59 59 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 68 59 57 57 57 57 50 48 57 57 57 57 59 59 68 59 59 57 57 59 59 57 57 57 53 53 53 57 57 57 59 57 43 59 32 32 28 20 20 24 24 31 37 23 14 3 0 3 14 15 37 39 41 41 50 43 43 39 39 39 18 12 13 15 15 18 25 17 3 0 3 17 19 24 22 21 21 23 37 39 30 25 24 22 28 28 30 31 31 37 25 27 17 16 19 19 24 21 19 19 21 21 18 21 37 30 16 15 15 14 19 14 9 9 10 10 10 17 13 11 10 10 10 9 8 8 6 6 7 12 13 14 14 13 15 8 8 8 10 11 9 8 8 8 13 8 8 8 8 8 9 11 12 10 9 9 8 8 15 19 19 8 8 8 8 8 9 9 10 10 10 10 10 10 11 11 8 10 8 8 8 10 8 8 8 6 8 8 15 10 8 8 8 8 8 9 10 13 13 13 9 10 8 8 8 6 6 8 8 8 15 10 9 9 9 9 9 8 8 8 8 8 10 10 9 9 10 10 9 10 10 8 8 8 8 6 6 8 8 8 13 12 8 10 12 13 15 10 9 7 10 6 6 8 10 10 9 9 8 8 8 8 8 8 9 9 8 8 8 8 8 8 8 8 8 8 8 10 11 11 13 11 10 10 11 11 11 6 8 6 6 6 6 8 8 8 10 12 11 11 10 10 10 10 12 10 9 8 8 10 8 8 8 8 8 8 12 10 10 10 8 8 10 10 11 6 6 7 7 7 6 8 8 10 10 8 8 6 6 8 12 8 8 6 6 8 8 8 10 9 9 9 7 10 10 10 10 13 14 8 10 9 9 9 8 8 8 8 8 10 8 8 8 8 8 8 8 8 6 6 8 8 15 10 11 10 8 12 10 8 8 8 8 8 10 8 6 6 8 8 8 8 10 11 8 8 8 8 8 9 9 9 8 8 6 6 6 8 8 8 8 9 12 12 12 12 12 12 11 11 8 8 6 7 8 8 11 10 9 9 9 8 10 10 9 9 11 10 10 13 13 10 10 10 12 8 8 8 6 8 8 10 15 10 8 9 8 8 8 7 7 8 8 8 12 13 13 9 8 8 8 8 13 11 19 12 14 19 13 10 10 8 8 10 10 10 8 13 11 12 17 11 13 11 21 19 19 13 10 11 11 11 10 10 9 9	Open. Hide. 0 3 8 6 6 6 8 8 10 10 10 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 6 7 7 3 0 3 11 11 7 7 6 7 6 6 6 7 7 6 6 8 3 0 0 0 0 0 0 0 0 3 0 3 0 0 0 3 7 14 14 9 9 10 9 3 0 0 0 3 7 7 8 8 8 8 8 10 8 8 8 8 3 0 3 9 9 9 9 13 13 3 0 3 11 8 8 8 8 7 9 3 0 0 0 0 0 0 3 0 0 0 0 0 0 3 17 19 14 3 0 3 3 0 0 0 0 0 3 0 0 0 3 3 0 3 6 8 9 7 8 8 9 7 7 8 9 9 17 16 12 10 9 6 6 6 6 6 6 8 6 19 25 21 9 12 8 8 8 8 19 3 0 3 16 16 3 0 3 10 12 12 12 13 3 0 3 9 3 0 0 3 0 0 3 3 0 0 0 3 17 7 9 9 9 9 9 9 12 24 12 12 24 24 24 15 9 7 6 6 6 14 21 3 0 3 6 7 7 6 8 9 3 0 3 0 3 13 11 8 8 3 0 0 3 18 3 0 3 11 3 0 3 8 8 14 14 8 10 10 10 7 7 3 0 0 0 0 3 13 3 0 3 0 3 6 6 7 12 15 8 8 8 8 8 8 7 7 9 15 10 12 12 12 12 21 13 13 3 0 3 7 7 9 19 14 10 8 6 6 6 7 7 11 3 0 3 8 3 0 3 3 0 0 3 3 0 3 3 0 3 8 8 8 8 8 8 7 7 8 3 0 3 10 10 8 8 9 9 9 9 9 9 9 8 7 8 7 7 9 3 0 0 0 0 3 8 6 3 0 3 0 0 0 3 9 3 0 0 3 3 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 3 0 3 8 8 6 7 27 19 24 12 12 12 12 9 9 9 6 6 6 6 8 8 8 6 6 6 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 3 0 3 3 0 3 0 3 10 3 0 3 8 10 10 10 11 12 10 10 6 6 6 6 8 10 10 10 8 8 8 8 8 11 13 8 10 8 6 6 8 8 7 7 3 0 3 6 6 6 7 7 3 0 3 6 6 6 6 9 15 9 6 6 6 6 6 8 8 13 7 7 7 6 6 6 11 6 6 6 6 8 6 10 6 6 6 3 0 0 0 0 0 0 3 0 0 3 9 9 3 0 0 0 0 0 0 0 0 0 0 0 0 3 0 3 3 0 0 0 0 0 0 0 3 0 3 0 0 3 0 0 3 15 19 22 13 12 8 8 8 8 11 13 9 8 8 6 6 6 6 7 9 15 15 11 11 11 9 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 3 0 3 3 0 3 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 3 0 0 0 0 0 0 0 0 3 8 8 8 8 6 6 6 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 7 8 9 11 18 11 10 9 10 9 8 8 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 3 0 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 3 8 8 3 0 0 0 0 3 12 3 0 0 3 3 0 0 0 0 0 0 0 3 8 6 9 7 7 3 0 0 0 0 0 0 0 3 3 0 3 7 3 0 0 0 0 0 0 0 0 0 0 3 6 3 0 3 0 3 7 6 6 6 7 3 0 3 3 0 0 3 0 0 3 3 0 0 0 0 3 6 8 6 6 6 6 6 9 8 7 6 6 3 0 3 0 3 8 8 8 8 10 8 8 9 9 8 8 8 8 8 8 6 6 7 6 6 6 8 6 8 6 7 8 8 3 0 3 6 6 6 6 6 6 6 6 8 9 6 6 6 6 7 7 7 6 6 6 6 6 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no532_i01.b1 MSMg01no532_i01.b1 CHROMAT_FILE:
MSMg01no532_i01.b1 PHD_FILE: MSMg01no532_i01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:26 2005
         (302 letters)



>mm_chr13_35640198_35640898
          Length = 701

 Score =  532 bits (275), Expect = e-155
 Identities = 294/303 (97%), Gaps = 7/303 (2%)
 Strand = Plus / Plus

                                                                       
Query: 3   gaattcttacagca---ttttctggaaatgcctcattttgttccaggaaggctgctatga 59
           ||||||||||||||   |||   |||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcttacagcagccttt---ggaaatgcctcattttgttccaggaaggctgctatga 259

                                                                       
Query: 60  ggcaagaaaaagctggttgtaaacgctttactcggggacaaaggacaagttcaagttgtt 119
           |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 260 ggcaagaaaaagctggttgtaaacgctttacttggggacataggacaagttcaagttgtt 319

                                                                       
Query: 120 cctgtcttaccacattgacaatagaaacataacaattactgcttgtagccacctcaccac 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cctgtcttaccacattgacaatagaaacataacaattactgcttgtagccacctcaccac 379

                                                                       
Query: 180 cccagcactccctttgacctcttaataagcctttccagtctcattatctctagattcaac 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccagcactccctttgacctcttaataagcctttccagtctcattatctctagattcaac 439

                                                                       
Query: 240 ttcccctagaccagtctctctgtacaattacactgcctcaagacactnggagaggaagcc 299
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 440 ttcccctagaccagtctctctgtacaattacactgcctcaagacact-ggagaggaagcc 498

              
Query: 300 cct 302
           |||
Sbjct: 499 cct 501


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 701
Length adjustment: 9
Effective length of query: 293
Effective length of database: 692
Effective search space:   202756
Effective search space used:   202756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information