ATCCCTTGTTTTTTATAAATCGTGGAXXXXXXXXXXXXXXXXXXXXXTTT
CAGGATCCGCGGAATTCAAGGCCCATACCTAAACATCTTAAAAGCAATAC
ACAGCAAATGTACATCAAACTAAATGGAGAAAAACTTGAAACAATCCCAT
AAAATCAGGGACTAAGCAAGGCTGCCCACTCTCTCCCTACCTATTCAATA
TAGTGCTGAAAGTCCTAGTCAGAGCAATTAGAAAACAAAAGGAGATCATA
GGGATACAAATTGGAAATGAAGAAGTCAAAAATATCACTATTTGCAGATG
ACAAGACAGTATTCATAAGTAATCCCATATATTCCATCATAGAACTCCTC
ATCTGATAAACGACTTCAGCAAGGTGGCTGGATATAAAATTAATTCAAAC
AAATCAGTGGCCTTTCTCTACACAAAGGATAAACAGGCTGAGAAAGGAAT
TAGGGAATCAACATCCTCCATTATAGCCACAAATAATATAAAATACCTCT
GGTGTGACCTCTTATAATGAAGGGAAAGATCTGTATGATTAGAACTTCAA
GTCTCTTCAAGATATACATTGCACCAAAATCTTCGATTATGGAAAGATCC
CCTTTGTTCTTGGATCGTCACGTATACTTTAGTATAAACTGCCACTTTTC
CCCAAGTCACCTACCTATTTCCCGCAACTCTCCTTCTATTTTTCAACTCC
TTTCTCCCCCATATTTTATTTAAATTCACTTCTCCAAC

NNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXATTCAGAAAGAAGAAAATAAAA
TATAATGAATTTCCATTATTATTTATATTCCAGGCATTGGGGTAGATAGA
TTTTTTTCTCTGAAACGCTTCAAGTTATTATCATTAATTTATTTCTTAAA
TTCGAGTGAACCTAGTTTGAGTTTTACAGTTAAGTGGTTTGCCCAAGGCT
ACTTTGCGACAGATCATTGGCCTAAAAGCTTATCAACTCTCTGTTATCCT
ATTCTCCCTTCACAATACACTTGAATAAACAAGTCTACAAAGAAGTAGGG
CAGAAGCAAACTAGTAATAGATTGCTACATGTTTCCCAGACATGATAATG
ATCAGTATTTACTGCAAGCATCATGTACACATGATGGGAAATCATAAAAA
GTCATTGATTGGATACGTTTTTATTGTGAGATGTTTTACTTTGTCTTGTC
AAATGTGTGGGTTTTACCTGGTTTCCTTTTTTTTTTTTTTTACTTTATTT
CCTTAGCTGGTAATCATTCATAGTCCCTCCCTCATATCATCTACAAAACA
CGTGGTATCCAGTGCAAAGGCACTTTCTTAGGCAGGATCAACTTTCTAAG
GGATGAAAAAACAGTGATGATCTTTGTGCAAGTCAAGCCACTACCTTGGC
TCCCAAAGTTATTATTTAGAAAATTAAGTACCTTTTACAAT

Query= MSMg01no533_c07.g1 MSMg01no533_c07.g1 CHROMAT_FILE:
MSMg01no533_c07.g1 PHD_FILE: MSMg01no533_c07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:16 2005
         (660 letters)



>mm_chr13_89883558_89884620
          Length = 1063

 Score = 1236 bits (639), Expect = 0.0
 Identities = 656/663 (98%), Gaps = 5/663 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attcagaaagaagaaaa-taaaatataatgaatttccattattatttatattccaggcat 59
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcagaaagaagaaaaataaaatataatgaatttccattattatttatattccaggcat 260

                                                                       
Query: 60  tggggtagatagatttttttctctgaaacgcttcaagttattatcattaatttatttctt 119
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggggtagatagatttttt-ctctgaaacgcttcaagttattatcattaatttatttctt 319

                                                                       
Query: 120 aaattcgagtgaacctagtttgagttttacagttaagtggtttgcccaaggctactttgc 179
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaattcaagtgaacctagtttgagttttacagttaagtggtttgcccaaggctactttgc 379

                                                                       
Query: 180 gacagatcattggcctaaaagcttatcaactctctgttatcctattctcccttcacaata 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gacagatcattggcctaaaagcttatcaactctctgttatcctattctcccttcacaata 439

                                                                       
Query: 240 cacttgaataaacaagtctacaaagaagtagggcagaagcaaactagtaatagattgcta 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cacttgaataaacaagtctacaaagaagtagggcagaagcaaactagtaatagattgcta 499

                                                                       
Query: 300 catgtttcccagacatgataatgatcagtatttactgcaagcatcatgtacacatgatgg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 catgtttcccagacatgataatgatcagtatttactgcaagcatcatgtacacatgatgg 559

                                                                       
Query: 360 gaaatcataaaaagtcattgattggatacgtttttattgtgagatgttttactttgtctt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gaaatcataaaaagtcattgattggatacgtttttattgtgagatgttttactttgtctt 619

                                                                       
Query: 420 gtcaaatgtgtgggttttacctggtttccttttttttttttttt---actttatttcctt 476
           ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||
Sbjct: 620 gtcaaatgtgtgggttttacctggtttcctttttttttttttttttaactttatttcctt 679

                                                                       
Query: 477 agctggtaatcattcatagtccctccctcatatcatctacaaaacacgtggtatccagtg 536
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agctggtaatcatccatagtccctccctcatatcatctacaaaacacgtggtatccagtg 739

                                                                       
Query: 537 caaaggcactttcttaggcaggatcaactttctaagggatgaaaaaacagtgatgatctt 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caaaggcactttcttaggcaggatcaactttctaagggatgaaaaaacagtgatgatctt 799

                                                                       
Query: 597 tgtgcaagtcaagccactaccttggctcccaaagttattatttagaaaattaagtacctt 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgtgcaagtcaagccactaccttggctcccaaagttattatttagaaaattaagtacctt 859

              
Query: 657 tta 659
           |||
Sbjct: 860 tta 862


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1063
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1053
Effective search space:   684450
Effective search space used:   684450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)