Query= MSMg01no535_a22.b1 MSMg01no535_a22.b1 CHROMAT_FILE:
MSMg01no535_a22.b1 PHD_FILE: MSMg01no535_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:46 2005
(578 letters)
>mm_chr13_3785862_3786841
Length = 980
Score = 1058 bits (547), Expect = 0.0
Identities = 568/577 (98%), Gaps = 6/577 (1%)
Strand = Plus / Minus
Query: 6 aattccctgaa---gtttcattgattcaggggcagaggttactggctaacagccaatagc 62
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 aattccctgaagagg--tcattgattcaggggcagaggttactggctaacagccaatagc 723
Query: 63 agctcacacctgccagcaatcacgtaagggagcctcaagtgcccgtcatgtgatgttagc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 agctcacacctgccagcaatcacgtaagggagcctcaagtgcccgtcatgtgatgttagc 663
Query: 123 tcttgatgataactttactgagaactattaagaggcctcaggttacatgtacccaactaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tcttgatgataactttactgagaactattaagaggcctcaggttacatgtacccaactaa 603
Query: 183 gcctctctcaagattctaaatcataaatgattacttccacgtggaaggcaaggtggaaca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gcctctctcaagattctaaatcataaatgattacttccacgtggaaggcaaggtggaaca 543
Query: 243 tagcccctacacatttgggattcagagacccaccattactgttctaagatagatattaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tagcccctacacatttgggattcagagacccaccattactgttctaagatagatattaaa 483
Query: 303 tgtttggggtcctgtgtctcacctatcagaatacactttctggacctgcttttgagaaga 362
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 482 tgtttggggtcctgtgtctcacctatcagaatacactttctagacctgcttttgagaaga 423
Query: 363 ttcaagcatcaaggttcattgctctattcaacataattaaaaccatgatttcaaagagct 422
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttcaagcatcacggttcattgctctattcaacataattaaaaccatgatttcaaagagct 363
Query: 423 acaaaaac-attttatataagaaggacattcctgtcaccctttgctaagttgtggtcact 481
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 acaaaaaccattttatataagaaggacattcctgtcaccctttgctaagttgtggtcact 303
Query: 482 ctcatgggaaggaacccactgccttagcttatattacattcacacaactatacatattgt 541
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 302 ctcatgggaaggaacccactgccttagcttatatttcattcacacaactatacatattgt 243
Query: 542 cagaatggaactaatttaatcagaattgatgtcacag 578
|||||||||||||||||||||||||||||||||||||
Sbjct: 242 cagaatggaactaatttaatcagaattgatgtcacag 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 980
Length adjustment: 10
Effective length of query: 568
Effective length of database: 970
Effective search space: 550960
Effective search space used: 550960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_a22.g1 MSMg01no535_a22.g1 CHROMAT_FILE:
MSMg01no535_a22.g1 PHD_FILE: MSMg01no535_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:46 2005
(634 letters)
>mm_chr13_3645769_3646802
Length = 1034
Score = 938 bits (485), Expect = 0.0
Identities = 485/485 (100%)
Strand = Plus / Plus
Query: 150 cagggtttgagtatatgggctattggaatgccaagattccaggagactgtttccttgaaa 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cagggtttgagtatatgggctattggaatgccaagattccaggagactgtttccttgaaa 409
Query: 210 ctctttgcttgtgactgcttccaagcttttaggcctgtaatgcgtgtcactactggtgtg 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ctctttgcttgtgactgcttccaagcttttaggcctgtaatgcgtgtcactactggtgtg 469
Query: 270 gatgtagcagtctctcactattcccattttcattcagcactagttgggcctagacgcatt 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gatgtagcagtctctcactattcccattttcattcagcactagttgggcctagacgcatt 529
Query: 330 gctgtgtgcacactggaactgatgttttcagtcagtttccctcctcattgaccctccttt 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gctgtgtgcacactggaactgatgttttcagtcagtttccctcctcattgaccctccttt 589
Query: 390 ctatccagccaaagagtgccaagagtggtgctggggctggagagatggcttagtggttaa 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ctatccagccaaagagtgccaagagtggtgctggggctggagagatggcttagtggttaa 649
Query: 450 aagtatactggctgttcttctagaggtcctgagttcaattcccagcaaccacatgatggc 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 aagtatactggctgttcttctagaggtcctgagttcaattcccagcaaccacatgatggc 709
Query: 510 tcacaaccatctatactgggatctgatgccctcttctggcatgtaggtgtacatgcagat 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tcacaaccatctatactgggatctgatgccctcttctggcatgtaggtgtacatgcagat 769
Query: 570 agagcactcagatacataaagtaaataaatctttcctttttaaagaattatttactttgg 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 agagcactcagatacataaagtaaataaatctttcctttttaaagaattatttactttgg 829
Query: 630 gaagg 634
|||||
Sbjct: 830 gaagg 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
