TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAAGAACACATCTAAATGATCATTCACCATGGTTAAATAAGCTTC
ATTCCAGGATGCAGGGGTGGTTCAATTTCAAAAATGCATCAATGTATTCC
TCTACGTAAACAAACAAAATATCACATGATTATCTCATTAGATGCTGAAG
AAGACTGAGAAAATACAACATTGCTTCATGTTAAAAGACTTGGAAATATC
AGGAATTCAAAGAATATACCTAAACATGAAAAAACAAAACAAAACAAAAC
AAAAACAAAATACAGCAAATCAAAAACCAACACCAAATTAAATGAAGAGA
GACTTTAAACAATCCAACTAAAATCAGGGATAAATCAAAGCTGATCATTC
TCTTCCAATTTATTCAATATAGTGCTTGAAGGTTTTTTTTTTTAAATTAG
GTATTTTCTTCGTTTACATTTTCAATGCTATCCCAAAAGTCCCCCATACA
CACACCCCCAATTCCCTACCCATGCACTCCCCCTTTTTGGCCCTGGGGTT
CCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTG
CAGTGATGGCCGACGAGGCCATCTTTTGATGCATATGCAGCTAGAGACAA
GAGCTCTGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTG
CAGATTCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGC
CGTGTGACCCATCCAATAGCTGACTGTGATC

AATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCATGACAACAAGAAGGCAGAGATGACAC
TATAGCAGGAATAGAGTGTAATAGCCTTAGGCAGAGACAGAATGAAAAAC
TAATTAGGAATGCTGTATTTGTTTTTGTTTTGTTTGTTTGAAAATAGATT
TTTGTTTGAAAGAAAAAATAAATAAATAATACATAAAATAGAGCTTTTGT
TATACAATATATACTGGTTATAGTTTCTCTACTCTTTTTTTTAGCACCCT
GAACCTTTAAAAGCTTTCCACTAAATCATCCTGTTTTTCACCTTCCTTTT
AATATCCTGTTTAAAATGTCTTGGTGTTTCATCTCCTATTTAATATTCTG
TGTCTCTAAGACAGGAAGCTCTAATCATAGACACAACTGCTACACAATGG
GGTTGTTGCTCAGCCATCATCCCATAGAGTATATATCATTGGTGAGAACG
TGTTATTTATTATTCTAGTGAAAATGATAATATTATGACATGGGAAATAA
TATGAAAATAAATTATGATTTTTTTATTGTGAAGTATGAGTGTAAAAGCC
AACTTAAGGGAGGTAAAATATATTCTGAGCTCTAGTTTCAGAGGTTTTAG
TCATTTGATTTCATTAGTTCTGGAATGGACATTATAGAGCTCAGCTGTTT
TGTTAAATTGGAGAGGGGGGCAGAGAGAAAAAGATACTGAGAGACTGANN
AACAGACNGACTGAGACTGAGAGACTGAGAGATAGA

Query= MSMg01no535_j07.g1 MSMg01no535_j07.g1 CHROMAT_FILE:
MSMg01no535_j07.g1 PHD_FILE: MSMg01no535_j07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:26 2005
         (652 letters)



>mm_chr13_88126830_88127881
          Length = 1052

 Score = 1166 bits (603), Expect = 0.0
 Identities = 636/653 (97%), Gaps = 12/653 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    catgacaacaagaaggcagagatgacactatagcaggaatagagtgtaatagccttaggc 60
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1010 catgacaacaagaaggcagagatgatactatagcaggaatagagtgtaatagccttaggc 951

                                                                        
Query: 61   agagacagaatgaaaaactaattaggaatgctgtatttgtttttgttttgtttgtttgaa 120
            |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950  agagacagaaagaaaagctaattaggaatgctgtatttgtttttgttttgtttgtttgaa 891

                                                                        
Query: 121  aatagatttttgtttgaaagaaaaaataaataaataatacataaaatagagcttttgtta 180
            |||||||||||||||||||||||||          |||||||||||||||||||||||||
Sbjct: 890  aatagatttttgtttgaaagaaaaa----------aatacataaaatagagcttttgtta 841

                                                                        
Query: 181  tacaatatatactggttatagtttctctactc-ttttttttagcaccctgaacctttaaa 239
            ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 840  tacaatatatactagttatagtttctctactctttttttttagcaccctgaacctttaaa 781

                                                                        
Query: 240  agctttccactaaatcatcctgtttttcaccttccttttaatatcctgtttaaaatgtct 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780  agctttccactaaatcatcctgtttttcaccttccttttaatatcctgtttaaaatgtct 721

                                                                        
Query: 300  tggtgtttcatctcctatttaatattctgtgtctctaagacaggaagctctaatcataga 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720  tggtgtttcatctcctatttaatattctgtgtctctaagacaggaagctctaatcataga 661

                                                                        
Query: 360  cacaactgctacacaatggggttgttgctcagccatcatcccatagagtatatatcattg 419
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660  cacaactgctacacaat-gggttgttgctcagccatcatcccatagagtatatatcattg 602

                                                                        
Query: 420  gtgagaacgtgttatttattattctagtgaaaatgataatattatgacatgggaaataat 479
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  gtgagaacatgttatttattattctagtgaaaatgataatattatgacatgggaaataat 542

                                                                        
Query: 480  atgaaaataaattatgatttttttattgtgaagtatgagtgtaaaagccaacttaaggga 539
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  atgaaaataaattatgatttttttattgtgaagtatgagtgtaaaagccaacttaaggga 482

                                                                        
Query: 540  ggtaaaatatattctgagctctagtttcagaggttttagtcatttgatttcattagttct 599
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  ggtaaaatatattctgagctctagtttcagaggttttagtcatttgatttcattagttct 422

                                                                 
Query: 600  ggaatggacattatagagctcagctgttttgttaaattggagaggggggcaga 652
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  ggaatggacattatagagctcagctgttttgttaaattggagaggggggcaga 369


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space:   668964
Effective search space used:   668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)