Query= MSMg01no536_d19.b1 MSMg01no536_d19.b1 CHROMAT_FILE:
MSMg01no536_d19.b1 PHD_FILE: MSMg01no536_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:17 2005
(371 letters)
>mm_chr14_56041178_56041946
Length = 769
Score = 661 bits (342), Expect = 0.0
Identities = 363/372 (97%), Gaps = 5/372 (1%)
Strand = Plus / Plus
Query: 4 ggaattctgtacacagtttgttcaaggtcagcatagactacatgaaatgctgtctttaaa 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattctgtacacagcaagttcaaggtcagcatagactacatgaaatgctgtctttaaa 264
Query: 64 aaaaaagtacacacggtattaacttctcatcacagtgaaaaaatgcatataaggcagagc 123
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaaa-gtacacacggtattaacttctcatcacagtgaaaaaatgcatataaggcagagc 323
Query: 124 tacacaggcacagggccagtcagctgtagttccaactaggcaagaaatctgcctcccctg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tacacaggcacagggccagtcagctgtagttccaactaggcaagaaatctgcctcccctg 383
Query: 184 tcaacactaagtctaccagatgaggggagacacgcccaccgcatcggaaccttgggaact 243
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 384 tcaacactaagtctaccagatgaggggagacacgcccactgcatcggaaccttgggaact 443
Query: 244 ctagactaaaagcttgaaagcactgatacagtgtcttttgtagtgctcaccctcacctcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctagactaaaagcttgaaagcactgatacagtgtcttttgtagtgctcaccctcacctcc 503
Query: 304 agactttgtgctgcagccctagtgtttggatggctgtatcaaggggaaggg----gaagg 359
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 504 agactttgtgctgcagccctagtgtttggatggctgtatcaaggggaagggaaaggaagg 563
Query: 360 ggaaggggaagg 371
||||||||||||
Sbjct: 564 ggaaggggaagg 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 769
Length adjustment: 9
Effective length of query: 362
Effective length of database: 760
Effective search space: 275120
Effective search space used: 275120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_d19.g1 MSMg01no536_d19.g1 CHROMAT_FILE:
MSMg01no536_d19.g1 PHD_FILE: MSMg01no536_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:17 2005
(387 letters)
>mm_chr13_49576200_49576985
Length = 786
Score = 617 bits (319), Expect = 0.0
Identities = 322/323 (99%), Gaps = 1/323 (0%)
Strand = Plus / Plus
Query: 65 cctgaaaagctttttaaaaaatctgaatgtgtagtgtagttcttttttgtttttctctct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctgaaaagctttttaaaaaatctgaatgtgtagtgtagttcttttttgtttttctctct 324
Query: 125 ttcttgagacagaatctcactttgtagccacagctgtcctgtagctcagagatccagtgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcttgagacagaatctcactttgtagccacagctgtcctgtagctcagagatccagtgg 384
Query: 185 cttctggctcctgagtgttgggactcaatgtgtagccatcaggcctagctacatgtggtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttctggctcctgagtgttgggactcaatgtgtagccatcaggcctagctacatgtggtc 444
Query: 245 cttttcaatttggagtataacaagatgcaataaaacaaagcagctaagacaggcattcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttttcaatttggagtataacaagatgcaataaaacaaagcagctaagacaggcattcaa 504
Query: 305 tctgagatatcataaacagccagaaatttaaaaaaaaaattaggtctatgtgacacttaa 364
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 505 tctgagatatcataaacagccagaaatttaaaaaaaaa-ttaggtctatgtgacacttaa 563
Query: 365 tctgaaacctttacaagtacaag 387
|||||||||||||||||||||||
Sbjct: 564 tctgaaacctttacaagtacaag 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 786
Length adjustment: 9
Effective length of query: 378
Effective length of database: 777
Effective search space: 293706
Effective search space used: 293706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
