TTTTTTTACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTAGACCGCATTCCAGATAGCCACACATAAGTCTTAC
TCCATTAGTTTCCTCCCAGTTTCTTGTCCAGGAAAGCCTGAAGCCTGCTT
TTGTTTTCTGTGGGAAGGGGAGGGTTCTGGTCTCCATTCTCCGCTGTGGA
GCGGAGCTTTCCTCTTCTTGGGTCTTTGTTTATAACTGTCCTTTGCTAGA
GCACAGGACAGTGACGCACTAAGATGTTTCTCTTGCAGGTGGAGAAATAT
ACTAGATGACCTGTTGAGTCGTTCCTTTTACATGCTAAAATATACATCTT
GAAAGGGAGTATATGTAAGAAATGCAAAATCCACACCCTACCCACAGTCT
CCTGCACAACTACACACACAATTAGTTGTAATTCTGATTCAGGACTTAGA
TAAGTAACACTTCAAGTGAGGAACAAAATCTGATTTTGAGCAGGAATATG
AACTACAGCAGCAGCCCTCATTGCTGTTGTCACACCTATCACATACCCAG
CCATGAAAATAACCTGGGAACACCTTACTTTTTTTTTTTTGTTTTGTTTT
GTTTTTTGTTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCT
GGAACTCACTCTGTAGACCAGGCTGGCCTTGTACTCAGAGATCCACCTGC
CTCTGGCTCCAAGTGCTGGGATTAAAGCGTGG

NNTTTTTGGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCG
AATGGCAGAGAAGCACCTGAAAAAATGCTCAACATCCTTAATCATCAGGG
AAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACAGGTCAGAATG
GCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGA
AAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCAC
TCTGGAGATCAGTCTGGCGGTTCCTCAGAAAACTGGATATAGTACTACCG
GAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAAC
TGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAA
TAGCCAGAAGCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATA
CAGAAGATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAA
GAATGAATTTATGAAATTCCTGGCCAAATGGATGGACCTGGAGGGCATCA
TCCTGAGTGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCA
CTGATAAGTGGATATTAGCCCAAAACCTAAGATACCCAAGATATAAGATA
CAATTTCCTAAACACATGAAACTCAAGAAAAATGAAGACTGAAG

Query= MSMg01no537_l23.b1 MSMg01no537_l23.b1 CHROMAT_FILE:
MSMg01no537_l23.b1 PHD_FILE: MSMg01no537_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:12 2005
         (538 letters)



>mm_chr13_18015622_18016559
          Length = 938

 Score =  982 bits (508), Expect = 0.0
 Identities = 525/532 (98%), Gaps = 4/532 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctagaccgcattcca--gatagccacacataagtcttactccattagtttcctcc 62
           |||||||||||||||   ||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagaccgcag--caaagatagccacacataagtcttactccattagtttcctcc 262

                                                                       
Query: 63  cagtttcttgtccaggaaagcctgaagcctgcttttgttttctgtgggaaggggagggtt 122
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cagtttcttgtcccggaaagcctgaagcctgcttttgttttctgtgggaaggggagggtt 322

                                                                       
Query: 123 ctggtctccattctccgctgtggagcggagctttcctcttcttgggtctttgtttataac 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctggtctccattctccgctgtggagcggagctttcctcttcttgggtctttgtttataac 382

                                                                       
Query: 183 tgtcctttgctagagcacaggacagtgacgcactaagatgtttctcttgcaggtggagaa 242
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 383 tgtcctttgctagagcacaggacagtgacgcactaagttgtttctcttgcaggtggagaa 442

                                                                       
Query: 243 atatactagatgacctgttgagtcgttccttttacatgctaaaatatacatcttgaaagg 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atatactagatgacctgttgagtcgttccttttacatgctaaaatatacatcttgaaagg 502

                                                                       
Query: 303 gagtatatgtaagaaatgcaaaatccacaccctacccacagtctcctgcacaactacaca 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gagtatatgtaagaaatgcaaaatccacaccctacccacagtctcctgcacaactacaca 562

                                                                       
Query: 363 cacaattagttgtaattctgattcaggacttagataagtaacacttcaagtgaggaacaa 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cacaattagttgtaattctgattcaggacttagataagtaacacttcaagtgaggaacaa 622

                                                                       
Query: 423 aatctgattttgagcaggaatatgaactacagcagcagccctcattgctgttgtcacacc 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aatctgattttgagcaggaatatgaactacagcagcagccctcattgctgttgtcacacc 682

                                                               
Query: 483 tatcacatacccagccatgaaaataacctgggaacaccttactttttttttt 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tatcacatacccagccatgaaaataacctgggaacaccttactttttttttt 734


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space:   489984
Effective search space used:   489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)