Query= MSMg01no538_m11.b1 MSMg01no538_m11.b1 CHROMAT_FILE:
MSMg01no538_m11.b1 PHD_FILE: MSMg01no538_m11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:31 2005
(666 letters)
>mm_chr13_70196622_70197687
Length = 1066
Score = 1268 bits (656), Expect = 0.0
Identities = 661/663 (99%)
Strand = Plus / Plus
Query: 4 ggaattctttgtctcgtataaagagggaaaaaagaaacccaagccctttcaagaggaaga 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttgcctcgtataaagagggaaaaaagaaacccaagccctttcaagaggaaga 263
Query: 64 taatgacatatcggcccgcacggtgcagggcttcattccttatggtggtttccttaggaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taatgacatatcggcccgcacggtgcagggcttcattccttatggtggtttccttaggaa 323
Query: 124 atgctggtttacgtcttgaataattgaaactttgccgaatgcataatagatgtatgcatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atgctggtttacgtcttgaataattgaaactttgccgaatgcataatagatgtatgcatg 383
Query: 184 acaatgaggttgggaggcccatttcaggaaggcactgagaactgcgaaccttccatagcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acaatgaggttgggaggcccatttcaggaaggcactgagaactgcgaaccttccatagcc 443
Query: 244 cttcaagcacagggcagagagcctcactggccctgagaacagccctgcgagtccccaggg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cttcaagcacagggcagagagcctcactggccctgagaacagccctgcgagtccccaggg 503
Query: 304 cttggctttcttctcattactttaacgtgttcctccccagctgtgcacacagaacacagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cttggctttcttctcattactttaacgtgttcctccccagctgtgcacacagaacacagg 563
Query: 364 tttgcatttctctcatctttcccctttcctgcaggactgtgaatcggcagcgtctctttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttgcatttctctcatctttcccctttcctgcaggactgtgaatcggcagcgtctctttt 623
Query: 424 cctccttcatttcttctctccccctgtttgtagtcaggaggatgacaaatgacaggcaca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cctccttcatttcttctctccccctgtttgtagtcaggaggatgacaaatgacaggcaca 683
Query: 484 cagtctctttctgaatctttctcctcttcatcctttctcctaaggcagggatctgatcac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cagtctctttctgaatctttctcctcttcatcctttctcctaaggcagggatctgatcac 743
Query: 544 cagtctctaactgttaggatggttcaaggagaatactcgcaactcttttttaaataaaat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cagtctctaactgttaggatggttcaaggagaatactcgcaactcttttttaaataaaat 803
Query: 604 acatatctaagctccagggtgagttatctgtggggaaacgatctttangggatgatttaa 663
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 804 acatatctaagctccagggtgagttatctgtggggaaacgatctttaggggatgatttaa 863
Query: 664 aca 666
|||
Sbjct: 864 aca 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no538_m11.g1 MSMg01no538_m11.g1 CHROMAT_FILE:
MSMg01no538_m11.g1 PHD_FILE: MSMg01no538_m11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:31 2005
(665 letters)
>mm_chr13_70382827_70383891
Length = 1065
Score = 1228 bits (635), Expect = 0.0
Identities = 661/675 (97%), Gaps = 10/675 (1%)
Strand = Plus / Minus
Query: 1 ctcctgacccctggaagcatggcttgaacctacagggatgcctaagccactgctgtgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 ctcctgacccctggaagcatggcttgaacctacagggatgcctaagccactgctgtgatc 898
Query: 61 cttggtctccctgcccccaa--------ca--cccccccccccgccaaatacaccagcaa 110
||||||||||| |||||||| || ||||||||||||||||||||||||||||
Sbjct: 897 cttggtctccccgcccccaatacccacccacccccccccccccgccaaatacaccagcaa 838
Query: 111 tttttcccagaaggaagaaagtcagaaatgtggggctaaccttgggtattttcttctgat 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 tttttcccagaaggaagaaagtcagaaatgtggggctaaccttgggtattttcttctgat 778
Query: 171 tctttgaccttcttcctggttcccaacaccctgctatctcttctgaggcttcaaagagaa 230
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 777 tctttgaccttcttcctggttcccaacacgctgctatctcttctgtggcttcaaagagaa 718
Query: 231 ataacaaaatatattttacagtgttactgcttgctagtaaggtcaagtgtctttgtattt 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ataacaaaatatattttacagtgttactgcttgctagtaaggtcaagtgtctttgtattt 658
Query: 291 attctgttgtcattgaatcaatgagataaaaatttttgtcttcaggactcacccattgat 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 attctgttgtcattgaatcaatgagataaaaatttttgtcttcaggactcacccattgat 598
Query: 351 cgatatgactgaaacaccagttcatactttaggagacataggacattttcttagttataa 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 cgatatgactgaaacaccagttcatactttaggagacataggacattttcttagttataa 538
Query: 411 tctttcctttgggaatctctccccacattccatttggcaaagcaactttgacatctaaac 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tctttcctttgggaatctctccccacattccatttggcaaagcaactttgacatctaaac 478
Query: 471 actagggtctttttgatactgtatgtgtctgaatgtaggttcccattattccatcataaa 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 actagggtctttttgatactgtatgtgtctgaatgtaggttcccattattccatcataaa 418
Query: 531 ctcctttatgttcactcttgaattcagaatggcacaagagtgttgatatggatatgaaca 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ctcctttatgttcactcttgaattcagaatggcacaagagtgttgatatggatatgaaca 358
Query: 591 ttagaggaggaaacagcacaaatatacaccatgattcatattatatagatatttgagaac 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttagaggaggaaacagcacaaatatacaccatgattcatattatatagatatttgagaac 298
Query: 651 cataatcctaaatca 665
||||||||||||||
Sbjct: 297 tataatcctaaatca 283
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
