TTATCCTCATTATCGCGTCTATGACACCCGTTTTTTATATACTTGTTATT
GTCTTTTCTCTACAACAACGCCTGCACATTCTGTGGTTCCACACCGTCTT
GCGTGGCCTGCGGTGAGTTACACACCCGACGTTACAGAGTCCGAACGTCG
AGCCTGGCAAATCCTAATGGGAATAATGGGGATAGTGTTGACGCGTCCTT
TAATCTATGTCTGGAAGCATATATTTCTTTCGATGTGGACGTGCGATGCC
ATTCTCTGTGCGGCTGGTTGTCTGCGAGCTCACCGCTACATCTGTCATAA
TTTTTCCCTTGCAAACGAGATGCCGTTCTGTACATTTTTTCTTATTTTTT
TCTTTGTATGGTAAGATCGGGCTCGTTGTTTACCGAATGAATACTATCAA
ATAGTAGCCCCGCTTTGTTGCTGGCCCTACTGATTTATGGTCGCTCCATA
ATGTTCGGCGCCATTATTAATTATCACACTTTCTTCGCAGTTATTATATT
TTTTCTCTTCGCGTCGTACTTTTGTAGAATTTTATTACATACCCCGTCAT
AAAGCTTGTTATCCTACCCTTTATTTTTGCCAGTTATTCGGGTTTTACCC
CTTACCTATGTACATTAGCGCTCAGCATTTCTGCCGGGATTTATTTATGA
TAGACGATTTTATTATGCTTTTTTCCGTTATTTGATTCTTGATAGGATCT
ATGTTATCTTTCTGTTCTCTCCGTATTAGGTTTAAATTATAAGTATTTAT
AGGTACTTCTGTAATGGCAAAATTTTTATAAATTTCTACCTTCTAATAGG
ATAGCTTGTGCTACTGCCCCTGTAATAATAAAGGCCGCACTTGTTACTTT
CGCGCCCTTTTTTTC

NNCCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTCTTGCCGGCATTAAGGCT
TATAACCCAAAGGAATGGCCACAAGAACTGCTTTCTCTTTAGCCCGTGAG
AGGGAACTCAGGCAGCACCAGGCTGATTTGTTTCAGGAACAATGATCAAT
AAGATAATCATCATATTACTAAGGCTCAGGACTTCATAAAGTCAAACACA
GTAAATACAAGATAATGTACACTGTCAGCTTGCTCTACCAAGAGTGAGTT
CTCAGGTCTGGGGGACATCAGAGCAATCTCCTAACTCAGTTTAGTGATGT
CCCAACAGTTTCAGGCATCAAGGCTTCTAACAAAAGCAAATGAAAAGTTT
ATCTTCGATCCCCAGTCCCCTCTGGAGATGAGGTGAGAGAAAAAGAGATC
CTGACTGACAGGAGATTGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTTTCTCAGGAGGAAAAGGGAACAAAGGCTGGG
AGGTGGGGTAGGGTGAAGACAAATATTTACATCTCCAAACACAGAGAAAG
ATGTCTACTTAGAAGTAATTTGCATTCTTTTAGAAGAAGAGTTAAAAAGG
AAAGCCTTCCCTAAAAACAAACAAACAAACAAACAAACAAACAAACAAAA
CCAGAACCCCATTTCAGTACTTTCTTTTGGGGCAAATTCACCAAGGCTCA
AAAGGAGA

Query= MSMg01no539_l10.g1 MSMg01no539_l10.g1 CHROMAT_FILE:
MSMg01no539_l10.g1 PHD_FILE: MSMg01no539_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:46 2005
         (656 letters)



>mm_chr13_114849086_114850141
          Length = 1056

 Score = 1044 bits (540), Expect = 0.0
 Identities = 580/598 (96%), Gaps = 8/598 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcctcttgccggcattaaggcttataacccaaaggaatggccacaagaactgctttctct 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tcctcttgtcggcattaaggcttataacccaaaggaatggccacaagaactgctttctct 531

                                                                       
Query: 61  ttagcccgtgagagggaactcaggcagcaccaggctgatttgtttcaggaacaatgatca 120
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttagcccgagagagggaactcaggcagcaccaggctgatttgtttcaggaacaatgatca 471

                                                                       
Query: 121 ataagataatcatcatattactaaggctcaggacttcataaagtcaaacacagtaaatac 180
           ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 470 atacgataatcatcatattactaaggctcaggacttcattaagtcaaacacagtaaatac 411

                                                                       
Query: 181 aagataatgtacactgtcagcttgctctaccaagagtgagttctcaggtctgggggacat 240
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aagataatgtacactgtcggcttgctctaccaagagtgagttctcaggtctgggggacat 351

                                                                       
Query: 241 cagagcaatctcctaactcagtttagtgatgtcccaacagtttcaggcatcaaggcttct 300
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 350 cagagcaatctcctaactcagcttagtgatgtcccaacagtttcaggcatcaacgcttct 291

                                                                       
Query: 301 aacaaaagcaaatgaaaagtttatcttcgatccccagtcccctctggagatgaggtgaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 290 aacaaaagcaaatgaaaagtttatcttcgatccccagtcccctctggaggtgaggtgaga 231

                                                                       
Query: 361 gaaaaagagatcctgactgacaggagattgactctctctctctctctctctctctctctc 420
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 230 gaaaaagagatcctgactgacaggagattggctctctctctctctctctctctctctctc 171

                                                                       
Query: 421 tctctctctctctctctctctttctcaggaggaaaagggaacaaaggctgggaggtgggg 480
           ||||||||||||||        |||||||||||||||||||||||||||||||||| |||
Sbjct: 170 tctctctctctctc--------tctcaggaggaaaagggaacaaaggctgggaggtaggg 119

                                                                       
Query: 481 tagggtgaagacaaatatttacatctccaaacacagagaaagatgtctacttagaagtaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tagggtgaagacaaatatttacatctccaaacacagagaaagatgtctacttagaagtaa 59

                                                                     
Query: 541 tttgcattcttttagaagaagagttaaaaaggaaagccttccctaaaaacaaacaaac 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58  tttgcattcttttagaagaagagttaaaaaggaaagccttccctaaaaacaaacaaac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 77
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)