NNNCCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGGATTTCTTTGAGTTAATTTTATATCCAGCTACTGCACTGAAGCT
GTGAAGCTTGTTTATCAGGTTTAGGAGTTCTCTGGTGGAATTTTTAGAGT
CACTTATATATGCTATCATATCATCTGCAAATAATGATATTTTGACTTCT
TCCTTTCCAATTTGTATCCCCTTGATCTCCTTTTGTTGTCGAATTGTCCC
ATAAGTTTGGGTATGTTGTGGCTTCATTTTCATTAAACTCTAAAAAGTCT
TTAATTTCTTTCTTTATTCCTTCCTTGACCAAGGTATCATTGAGTAGAGT
GTTGTTCAGTTTCCATGTGAATGCTGGCTTTCTATTATTATGCTGTTATT
GAAGATCAGCCTTAGTCCATGGTGATCTGATAGGATTTATTGCATAATTA
CAATATTTTTGTACCTGTTGAGACCTGTTTTGTGACTGATTATATGGTCA
GTTTTGGAGGAGGTACCATGAGGTGCTGAGAAGAAGGTATATCCTTTTAT
TTTAGGATAAAACGTTCTGTAGATATCTGTTAAATCCATTTGTTTCATAA
CTTCTGTTAGTTTCCATGTGTCTCTGTTTAGTTTCTGTTTCCAGTATCTG
TCCATTGATGACAGTGGGGTGTTGAAATTTCCTACTATTATTGTGTGAGG
TGCAATGTGTACTTTGAGCTTTACTAAAGTTTCTTTAATGAATGTGGCTG
CCCTTGCATT

GGGGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAACACATCAAATCAAAA
CGATCATATAAAAAAGAAAGCATTTTGACCATTTCACAGGAGAAATCTTC
ATATGTACCTGTATACTCATATAAATAAATGCATATATTTATATCTTGTA
CTTATAAATAAATAGAATTGATCATTGATTTATAGATCTTCTTTTACTAA
AGAGGCTCAAATGCTTCATTTGTTTTTGTTCTATTACTCAAAAGTGGCAC
TTGCAATCATTAGAAGATTAACATAATCTGAGTCCTACATTTGAGAGTGT
CTCACTCACAAGACAAGGTCCCTGAGGTTCTGACTTTAGCTGATTTGTTG
GTTGGTTGGTTGGTTGGNTTTGGTTTTGGTTTTTCGAGACAGGGTTTCTC
TGTATAGCCCTGGCTATCCTGGAACTCACTTTGTAGACCAGGCTGGCCTC
GAACTCAGAAATCCGCCTGCCTCTGCCTCCCAAGCGCTGGGATTAAAGGT
GTGCGCCACCACGCCCGGCTTTTCAGCTGATTTTTAATATGGTCCCAGTG
TTCCCTTATAAATGAGAGGTTTGTTGGCACACCCCTGAAATATGCTACTT
TAATGGTTCACATGTTTTTCTTTTCTGATCATCTCTGGTCTTCTGAGTCA
CGCGTCACATCAAATGTGCTGGTGGACTCCTTGACTAAGGAAGCTTATGC
ATGTAAAC

Query= MSMg01no541_b08.g1 MSMg01no541_b08.g1 CHROMAT_FILE:
MSMg01no541_b08.g1 PHD_FILE: MSMg01no541_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:36 2005
         (538 letters)



>mm_chr13_74858990_74859927
          Length = 938

 Score =  893 bits (462), Expect = 0.0
 Identities = 495/506 (97%), Gaps = 1/506 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagaacacatcaaatcaaaacgatcatataaaaaagaaagcattttgaccatttcacagg 60
           ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 505 aagaacacatcaagtcaaaacgatcatacaaaaaagaaagcattttgaccatttcacagg 446

                                                                       
Query: 61  agaaatcttcatatgtacctgtatactcatataaataaatgcatatatttatatcttgta 120
           ||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 445 agaaatctttatatgtacctgtatattcatataaataaatacatatatttatatcttgta 386

                                                                       
Query: 121 cttataaataaatagaattgatcattgatttatagatcttcttttactaaagaggctcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttataaataaatagaattgatcattgatttatagatcttcttttactaaagaggctcaa 326

                                                                       
Query: 181 atgcttcatttgtttttgttctattactcaaaagtggcacttgcaatcattagaagatta 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 325 atgcttcatttgtttttgttctattactcaaaagtggcacttgcaatcattagatgatta 266

                                                                       
Query: 241 acataatctgagtcctacatttgagagtgtctcactcacaagacaaggtccctgaggttc 300
           |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 265 acataatctgagtcctacatttgagagtgtctcattcacaagacagggtccctgaggttc 206

                                                                       
Query: 301 tgactttagctgatttgttggttggttggttggttggntttggttttggtttttcgagac 360
           |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 205 tgactttagctgattttttggttggttggttggttgg-tttggttttggtttttcgagac 147

                                                                       
Query: 361 agggtttctctgtatagccctggctatcctggaactcactttgtagaccaggctggcctc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 agggtttctctgtatagccctggctatcctggaactcactttgtagaccaggctggcctc 87

                                                                       
Query: 421 gaactcagaaatccgcctgcctctgcctcccaagcgctgggattaaaggtgtgcgccacc 480
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 86  gaactcagaaatccgcctgcctctgcctcccaagtgctgggattaaaggtgtgcgccacc 27

                                     
Query: 481 acgcccggcttttcagctgattttta 506
           ||||||||||||||||||||||||||
Sbjct: 26  acgcccggcttttcagctgattttta 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space:   489984
Effective search space used:   489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)