TTTTTTACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCAAATTGTTCTCAAGAAGGTAAATACATCCAACAAAG
GTAAATATGCCCAAAGATATACCCGAAAGGTGAATAATCCAGCAAAGTAC
AGACACAAACAGTTTGAACTCCCACAGTTACCAATGACTTTTTGAATGTT
TCCCAGGGGAAATTCTAAATTAAGTATTGAACCCGTTCTAATTAATTTAT
CTGGTCACTGATTCAAAGGGCAAACTCTCCAGTTTTGATTGAACATCTGC
CAAGGTGGGCTATCCCACTTGTGAAGGGCAACTCAATAGTCAATCAAGAT
ACCCAAGACCAAACACCTTGAGTGATATACTTCCTGGCATGTGGTTGTGC
CCTGAGCAATTTTAGCATCGGGCCCATCAGAGCCTATCTCCTCTACCTCT
TAGTGAAACTGTGGAATCCTGGACAGTTCAGGCCAGAAAGCACAGCATTT
AGCAAGGCTCCACAGTGGTAGGTGTTCCCGAGAGACACATGTATGGATGC
ACACTTGCGTATCTGCACACACTCACACACACCAGGTGGTTCCCAACTCA
CAGCCTTCTCTCTTTGCAGTGGTGGGCAAACAATGGCATTCAGTATGAAT
CGGAGTTCTGATTTTGAATTTGTTGCTTTCCTGCACTCTTGATATGCCCT
TGCACCCCATTTGTGTTACTGTGGTGTGGTTCTTTGACTATGCTTGGCCT
GTGGAN

TGTGGNTATAAGATGCGAGGTTTTTGCTATGTAACCCTTTTTTATATTCT
CCATCTATGAGTAGGCTGGCGACGCCTGGTTTCCAXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXAGGCCAACTTGGGGTTCAGAGGGAGATCTTGT
CTACAAAAATGGATTAAGGTATATGTGAATATTTAATTATGTACAAACTC
GGCTTATCATTGGGCAAACTTCTGCAGGACCAAAATTTAAAATGAATTCC
CCCCCCCTTAAGAAAAGGCTGAAAACCAGTTTGCTCCCCTTAAAAATTGG
GGAAACATTGCCCCGGGGGCCCCTTTCCCCTTCTGGAAATTTCTTAAAGA
AAGGGGTGCAGGATCTTTCCGGAAAATTTTCAGGGGGTTTTACGTGGGGG
TGTTCCTTGGTAATAATAAAGTTCCTCTCGATACCCCTCTCCATGTGCTT
TTCCCCCTTAACAAAAAAACCATTTTTTTTTTGATGGGGGGCGTTTTTCT
CTATTTCATTTTATCTTTCTTTTTTTTTCTTTTCCTACTTTCTTTTTAAT
CTTTAAACCAACATTTTT

Query= MSMg01no541_g08.b1 MSMg01no541_g08.b1 CHROMAT_FILE:
MSMg01no541_g08.b1 PHD_FILE: MSMg01no541_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:01 2005
         (659 letters)



>mm_chr13_41195699_41196757
          Length = 1059

 Score = 1067 bits (552), Expect = 0.0
 Identities = 630/656 (96%), Gaps = 2/656 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaaattgttctcaagaaggtaaatacatccaacaaaggtaaatatgcccaaaga 64
           ||||||||  |||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 731 gaattccaggttgtcctcaagaaggtaaatacatctaacaaaggtaaatatgcccaaaga 672

                                                                       
Query: 65  tatacccgaaaggtgaataatccagcaaagtacagacacaaacagtttgaactcccacag 124
           ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tatgctcgaaaggtgaataatccagcaaagtacagacacaaacagtttgaactcccacag 612

                                                                       
Query: 125 ttaccaatgactttttgaatgtttcccaggggaaattctaaattaagtattgaacccgtt 184
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 611 ttaccaatgactttttgaatgtttcccaggggaaattctaaattaagtatggaacctgtt 552

                                                                       
Query: 185 ctaattaatttatctggtcactgattcaaagggcaaactctccagttttgattgaacatc 244
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctaattaatgtatctggtcactgattcaaagggcaaactctccagttttgattgaacatc 492

                                                                       
Query: 245 tgccaaggtgggctatcccacttgtgaagggcaactcaatagtcaatcaagatacccaag 304
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tgccgaggtgggctatcccacttgtgaagggcaactcaatagtcaatcaagatacccaag 432

                                                                       
Query: 305 accaaacaccttgagtgatatacttcctggcatgtggttgtgccctgagcaattttagca 364
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 431 accaaacaccttgagtgatatacttcctggcatgcggttgtgccctgagcaattttagca 372

                                                                       
Query: 365 tcgggcccatcagagcctatctcctctacctcttagtgaaactgtggaatcctggacagt 424
           | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 371 ttgggcccatcagagcctatctcctctaccccttagtgaaactgtggaatcctggacagt 312

                                                                       
Query: 425 tcaggccagaaagcacagcatttagcaaggctccacagtggtaggtgttcccgagagaca 484
           |||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||
Sbjct: 311 tcaggccagaaagcacagcatttagccaggctccacaatggtaggtgttccctagagaca 252

                                                                       
Query: 485 catgtatggatgcacacttgcgtatctgcacacactcacacacaccaggtggttcccaac 544
             |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tgtgtatggatgcacactcgagtatctgcacacactcacacacaccaggtggttcccaac 192

                                                                       
Query: 545 tcacagccttctctctttgcagtggtg-ggcaaacaatggcattcagtatgaatcggagt 603
           ||||| |||||| ||||| |||||| | ||||||||||||| ||||||||||||||||||
Sbjct: 191 tcacaaccttctgtctttacagtgg-gaggcaaacaatggctttcagtatgaatcggagt 133

                                                                   
Query: 604 tctgattttgaatttgttgctttcctgcactcttgatatgcccttgcaccccattt 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tctgattttgaatttgttgctttcctgcactcttgatatgcccttgcaccccattt 77


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space:   680801
Effective search space used:   680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)