Query= MSMg01no542_h22.b1 MSMg01no542_h22.b1 CHROMAT_FILE:
MSMg01no542_h22.b1 PHD_FILE: MSMg01no542_h22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:33 2005
(135 letters)
>mm_chr13_43514459_43514993
Length = 535
Score = 232 bits (120), Expect = 6e-66
Identities = 120/120 (100%)
Strand = Plus / Minus
Query: 16 gaattcatgagaaactgagactgttactagatgtccccaactacatgtcatcattcaaaa 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gaattcatgagaaactgagactgttactagatgtccccaactacatgtcatcattcaaaa 276
Query: 76 taagttgtcactaaccactgacaatagtgagaacacagtgagggatttaataaagcgtgg 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 taagttgtcactaaccactgacaatagtgagaacacagtgagggatttaataaagcgtgg 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 135
Length of database: 535
Length adjustment: 8
Effective length of query: 127
Effective length of database: 527
Effective search space: 66929
Effective search space used: 66929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no542_h22.g1 MSMg01no542_h22.g1 CHROMAT_FILE:
MSMg01no542_h22.g1 PHD_FILE: MSMg01no542_h22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:33 2005
(608 letters)
>mm_chr13_43332840_43333847
Length = 1008
Score = 1110 bits (574), Expect = 0.0
Identities = 600/610 (98%), Gaps = 4/610 (0%)
Strand = Plus / Plus
Query: 1 gacctgggccaccactgtcaggaacctcccaagggagcatggaggtttcatctgccaccc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacctgggccaccactgtcaggaacctcccaagggagcatggaggtttcatctgccacct 260
Query: 61 ctgttccttatttcttattcatactcgtcacttagaattgtaagatgttaaagctgacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgttccttatttcttattcatactcgtcacttagaattgtaagatgttaaagctgacag 320
Query: 121 catcttagaaacctagctggctgggactcatgtccaagttgaaaacacagtcccaaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catcttagaaacctagctggctgggactcatgtccaagttgaaaacacagtcccaaaagg 380
Query: 181 tatccacgttcccagccaccatctggccaactagcaggacagcaacaggaacaccagttt 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatccacgttcccagccaccacctggccaactagcaggacagcaacaggaacaccagttt 440
Query: 241 cctgagcagggttcatgtcaccctgggaaacatccccgtcttatttttctatgctatgac 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 cctgagcagggttcatgtcaccctgggaaacatccccgtcttatttttttatgctatgac 500
Query: 301 aaaacaccatgaccaaggcaacctgcaaaagaaagtgttttgtgtttcctggtggggctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaacaccatgaccaaggcaacctgcaaaagaaagtgttttgtgtttcctggtggggctt 560
Query: 361 ttcagtgtgggcacccctgcaggtggttcctggctttgtgacataagttcctgtcccaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcagtgtgggcacccctgcaggtggttcctggctttgtgacataagttcctgtcccaca 620
Query: 421 gaaggcttggcatggaggacaaacagtagatgcttcttgagcaaagtcctgactgctggg 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 621 gaaggcttggcatggaggacaaacagtagatgcttcttgagca--gtcctgactgccggg 678
Query: 481 ttggacattaatggcctttcctcataaagaaagaccttggtaagaaagatatggggccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttggacattaatggcctttcctcataaagaaagaccttggtaagaaagatatggggccat 738
Query: 541 tttaaatggtgggaaaaaa--gagtcccagaaaaatggctaatatggatgcggaggttgt 598
||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||
Sbjct: 739 tttaaatggtgggaaaaaaaagagtcccagaaaaatggctaagatggatgcagaggttgt 798
Query: 599 tgaaaagtgt 608
||||||||||
Sbjct: 799 tgaaaagtgt 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
