Query= MSMg01no542_n22.b1 MSMg01no542_n22.b1 CHROMAT_FILE:
MSMg01no542_n22.b1 PHD_FILE: MSMg01no542_n22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:02 2005
(641 letters)
>mm_chr13_38290318_38291359
Length = 1042
Score = 1180 bits (610), Expect = 0.0
Identities = 631/638 (98%), Gaps = 1/638 (0%)
Strand = Plus / Minus
Query: 5 gaattctcacagtaccttgcccaataccagacacaacaggtcttccttaggctggatgta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gaattctcacagtaccttgcccaataccagacacaacaggtcttccttaggctggatgta 783
Query: 65 gaaggtttggtctaagtagagctacttagaaagacttgaaatttttagggggcggagcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gaaggtttggtctaagtagagctacttagaaagacttgaaatttttagggggcggagcct 723
Query: 125 agaggaagtagaccacgaggagccagtctcttccttccatttcccctcccattcctgccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 722 agaggaagtagaccacgaggagccagtctcttccttccatttcccctcccactcctgccc 663
Query: 185 accctaaggtatctgtcccactgccatgaggttctgccttaatatgcacccagaggcagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 accctaaggtatctgtcccactgccatgaggttctgccttaatatgcacccagaggcagt 603
Query: 245 ggaggcaaggattatgaagtgaaaccagggggcagaataaatcattccttatttttcagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ggaggcaaggattatgaagtgaaaccagggggcagaataaatcattccttatttttcagt 543
Query: 305 gtagagccaagaactcttcagggatcctttccatagattcaagaacaattttgtttttcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gtagagccaagaactcttcagggatcctttccatagattcaagaacaattttgtttttcc 483
Query: 365 ttttgagggataaaatgcaacagtttttattttgaggctttccacagtcctccttgccac 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttttgagggataaaatgcaacagtttttattttgaggctttccacagtcctccttgccat 423
Query: 425 agtcctgtgatccttttggctggtgcttctgaaacttattacccagaataagacagagca 484
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 422 agtcctgtgatccttttggctggtgcttctgaagcttattacccagaataagacagagca 363
Query: 485 gggctttggtcgctaggatgctctagtctcattagtttctttccaaagagctaagttgaa 544
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 362 gggctttggtcgctaggatgctctagtctcattagctgctttccaaagagctaagttgaa 303
Query: 545 aaaactaaatgtagaagaccatctcttttt-aaaagcaaaaatcccaactagtattttga 603
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 302 aaaactaaatgtagaagaccatctcttttttaaaaacaaaaatcccaactagtattttga 243
Query: 604 tgggctttcttattaggttccttagtagatttagactg 641
||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgggctttcttattaggttccttagtagatttagactg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1042
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1032
Effective search space: 651192
Effective search space used: 651192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_n22.g1 MSMg01no542_n22.g1 CHROMAT_FILE:
MSMg01no542_n22.g1 PHD_FILE: MSMg01no542_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:02 2005
(620 letters)
>mm_chr13_38131959_38132977
Length = 1019
Score = 1129 bits (584), Expect = 0.0
Identities = 611/620 (98%), Gaps = 1/620 (0%)
Strand = Plus / Plus
Query: 1 tgtaaatctgtgttatctgcttgtctgtgttcgagtgtgtgtggggggggagagggggac 60
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 201 tgtaaatctgtgttatctgcttgtctgtgttccagtgtgtgtgtggggggagagggggac 260
Query: 61 aggccgggtgtcttcctcaacagttctccacttcatcttttctttatgtgtgtggatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggccgggtgtcttcctcaacagttctccacttcatcttttctttatgtgtgtggatgtg 320
Query: 121 tctgtgtgagtgtatacacatgtgtgtgcacatacctgtgtgcatgtggggaaggcagaa 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 tctgtgtgagtgtatacacatgtgtgtgcacatacctgtgcgcatgtggggaaggcagaa 380
Query: 181 gtggataccaagtccctcccttggaggtggagttacagataaataactaaacagggatcc 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 gtggataccaagtccctcccttggagctggagttacagataaataactaaacagggatcc 440
Query: 241 acaacatctaagcaggttcttacgtgtgtgctgggatccagttccagtcctgacatcact 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaacatctaagcaggttcttatgtgtgtgctgggatccagttccagtcctgacatcact 500
Query: 301 gagcctggagctcactgtttagccagccactggctcatgtcttccagacacccttctctc 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagcctgaagctcactgtttagccagccactggctcatgtcttccagacacccttctctc 560
Query: 361 tctcatctgccccagtgctgggatcacagatgtttgccactgagtttgcctttttatgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctcatctgccccagtgctgggatcacagatgtttgccactgagtttgcctttttatgtg 620
Query: 421 catgctgaggactgaacttagttctcagacttgaatgagaataatttatgggctgagcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtgctgaggactgaacttagttctcagacttgaatgagaataatttatgggctgagcca 680
Query: 481 tctttccaggccatgtagttttttaaaaaggctttgtgattctgtaggatatattgtctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctttccaggccatgtagttttttaaaaaggctttgtgattctgtaggatatattgtctt 740
Query: 541 agagccctggcttttactgattttcttttctttctttgtgcttttcatatttctcataat 600
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 741 agagccctggcttttactgatttt-ttttctttctttgtgcttttcatatttctcataat 799
Query: 601 ttcttgtatttggattcttt 620
||||||||||||||||||||
Sbjct: 800 ttcttgtatttggattcttt 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1019
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1009
Effective search space: 615490
Effective search space used: 615490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
