NTTTACCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTTAGCTCTGTACCCCACTTTTTAATGGGGTTATTT
GAATTTCTGGAGTTCAGCTTCTAGAGCTCTTTGTATATATTGGATATTAG
TCCCCTATCAATGAATTTATGAAATTCTTGGGCAAATGGATGTATCTGGA
GGATATCATCCTGAGTGAGGTAACCCAATCACAAAAGAAGTCACTTGATA
TGCACTCACTGATACGTGGATATTAGCCCAGAAACCTAGAATACCCAAGA
TACAACTTCCAAAACACAAGAAAATCAAGAAGGAAGACCAACACGTGGAT
ACTTCATTCCTCCCTAGAATAGGGAATAAAATATCCATGGAAGGAGTTGC
AGAGACAAAGTTTGGAGCTAAGACAAAATGATGGACCATCCAGAGACTAC
CCCACCCAGGGGTCCATCCCATAATCAGCCACCAAACACAGACACTATTG
CATATGCCAGCAAGATTTTGCTGAAAGGACCCTGATATAGCTGTCTCTTG
TGAGGCTATGCCATTGCCTGGCAAATACAGAAGTGGATGCTCACAGTCAT
CTATAGGATAGAGCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCC
AAGAGCTGAAGGGGTCTGCAACCCTATAGGTGGAACAACAATGATCAGTA
CCCCAGAGCTCGTGTCTCTAGCTGCATATGTAGCAGAAGATGG

NATCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTTGCGCATTCTAGGTGAGGGTCCCATTCGTCCTATC
TCCCTCCTAGAACCTACTTCTGGGGTAATGGGCAGATGGGTTTCTCCCTG
GATTTCAGTACAAGCAAGTCTATTCTGATGCAATCTGTACACCTGCACAC
CCATGTGCACATGCATGTGTGTGCATCTCTGCCCTCATCTCTAGATAGGG
AAGAAAGAAGAGAGAAGACAAACTGAGGGTAGATGCAGTCAAGAAGGCAG
CAAAGGGAAACTGAGAAGCTACTGGAAGCAGAGGGCACAAGAAAGACGGA
ACGAGGAACTATGACAACAGATGAAGGCTGGCTGCAGACCACTGTGGTTT
GAATATGGAATACTCCCATAAGCTTGTATGTTTCAATGCTCATTCCCAAG
CTGGTGGTGCTGTACTCGGGAGCATGATAGAACCTTTAGGAAGCGGAGCC
TTGGAGGGGGAAGAACTTCTCAAAGGAAGGGCTTCGAGGGTTTATGGCCT
GGCCCCACTTCCGATTCTCCCTCTCTCCCTCTCTCCCCCTCCCTCTCTCT
CTCCCCCCACTTCCCGTCGTGGTGGGATACAATCAGTCCTCTCCCTGTTC
CTGTCACCATGCATTCCCTGGCTATCGCCATGTCTTCTCCACCCTGATGG
AACTCTCTGTCTCTCCGAGTCTCTGGGCCAAAGTAAATCCTCC

Query= MSMg01no542_o18.g1 MSMg01no542_o18.g1 CHROMAT_FILE:
MSMg01no542_o18.g1 PHD_FILE: MSMg01no542_o18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:06 2005
         (660 letters)



>mm_chr13_46272579_46273638
          Length = 1060

 Score = 1195 bits (618), Expect = 0.0
 Identities = 652/668 (97%), Gaps = 8/668 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctaggtgagggtcccattcgtcctatctccctcctagaacctacttctggggtaatgggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ctaggtgagggtcccattcgtcctatctccctcctagaacctacttctggggtaatgggc 252

                                                                       
Query: 61  agatgggtttctccctggatttcagtacaagcaagtctattctgatgcaatctgtacacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 agatgggtttctccctggatttcagtacaagcaagtctattctgatgcaatctgtacacc 312

                                                                       
Query: 121 tgcacacccatgtgcacatgcatgtgtgtgcatctctgccctcatctctagatagggaag 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 313 tgcacacccatgtgcacatgcatgtgtgtgcatctctgccctcatctctagataggaaag 372

                                                                       
Query: 181 aaagaagagagaagacaaactgagggtagatgcagtcaagaaggcagcaaagggaaactg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aaagaagagagaagacaaactgagggtagatgcagtcaagaaggcagcaaagggaaactg 432

                                                                       
Query: 241 agaagctactggaagcagagggcacaagaaagacggaacgaggaactatgacaacagatg 300
           |||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 433 agaagctactggaagcagagggcacaagaaagacggaatgaggaattgtgacaacagatg 492

                                                                       
Query: 301 aaggctggctgcagaccactgtggtttgaatatggaatactcccataagcttgtatgttt 360
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aaggctggctgcggaccactgtggtttgaatatggaatactcccataagcttgtatgttt 552

                                                                       
Query: 361 caatgctcattcccaagctggtggtgctgtactcgggagcatgatagaacctttaggaag 420
           |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 553 caatgctcattcccaagctggtggtgctgtactcaggagcatgatagagcctttaggaag 612

                                                                       
Query: 421 cggagccttggagggggaagaacttctcaaaggaagggcttcgagggtttatggcctggc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cggagccttggagggggaagaacttctcaaaggaagggcttcgagggtttatggcctggc 672

                                                                       
Query: 481 cccacttccgattctccctctctccctctctccc--------cctccctctctctctccc 532
           ||||||||||||||||||||||||||||||||||        ||||||||||||||||||
Sbjct: 673 cccacttccgattctccctctctccctctctccctctctccccctccctctctctctccc 732

                                                                       
Query: 533 cccacttcccgtcgtggtgggatacaatcagtcctctccctgttcctgtcaccatgcatt 592
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 cccacttcccgtcgtggtgggatacaatcagtcctctccctgttcctgtcaccatgcatt 792

                                                                       
Query: 593 ccctggctatcgccatgtcttctccaccctgatggaactctctgtctctccgagtctctg 652
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 793 ccctggctatcgccatgtcttctccaccctgatggaactctttgtctctccgagtctctg 852

                   
Query: 653 ggccaaag 660
           ||||||||
Sbjct: 853 ggccaaag 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)