NNNCCTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCAACTGAGGAATGCCGAAGGGCTGACAAGCAGTTGAAAAAA
TGTTCAACATCCTTATTCAACAGGAAAATGCAAATCAAAAAAAAAAAAAA
AACCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTC
AGGTGACAGCAGACACTGATGAGGATGTGGAGAAAGAGGAACACTCCTCC
ACTGCTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAGTCAGTGTGA
AGGTTCCTCAGAAAATTGGACATAATACTACCGGAAGATCCAACAATACC
TCTCCTGGGTATATACCCAGAAGTAGTTCCAACTGGTAATAAGAACACCT
GCTCCACTATGTTCATAGCAGCCTTATTTATAACAGCCAGAAGCTGGAAA
GAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAATATGTGGTACAT
TTACACAATGGAGTACTACTCAGCTAGTAAAAACAATGAATTTATGAAAT
TCTTAGGCAAGTGGATATATATGGAGGATATTATCCTGAGTGAGGTAACC
CAATCACAAAAGAAGTCACTTGCTATGCACTCAGTGATAAGTGGATATTA
CCCCAGAAACCTACAACACCCAAGATACAATTTTCAAAATACAAAAGAAA
TCAAAAAGGAAGACCAACACGTGGATACTTCTTTCCTCCCTAAAATAGGG
AATAAAATGCCCATGGAAGG

NNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCATGATGTCAGGATGTCCTCGAG
ACATAGTCTTGAATGGCACATGGTTATAAGAGGCTGTAACATTTACCCTG
GAAAAAAACATGTTTGCTTCAAGCAACAATTGACATTTCTGGCTTCTTGC
CTGAATGTCAAGCTCTGTTTCAAATCACTTTCACTCATCATTTTGTGCCT
TGACCTTGCACCTCAAGCTAATATCAAATCACTGGGACTACTGGTGACTT
GCCTTTACTTCTAAAAATACATATCCCTGCCAATAACATAAGGATCAAGT
TCCTAAGAAGCCATAGTTAACATATGAAATAAAAAAACAGAACCTATAAA
AGTAACAAAAGAACTGTAGATTTGGAAAATGTTCAAAATATTAGTCCATT
CTTAAGATCACATGAACCTCTGAACCTCCAATGTCCTCTGTGACAGCTAT
GAACTGCAGTTGCTAGGGATGATTGAGGTTTGCATCTGAAATATTTCCCA
TAGGCTCATATGTTTGAATATCTGGCTCATAGATGGTAGGGCTGTTTGAG
AATTTGTGAAACTTGACCTACTCCCAGATTGTGAGAGTGGGTCTCTGCAG
ATAAAACTTTGAAAATTATAGCATGACTGTTGTGGATAGCCCTGGGGCTA
ATTATATTTGATGTTAATTCCATTCTCCTGTGAGTGATTGAGAACAAGGA
ATGAGTCANG

Query= MSMg01no542_p16.g1 MSMg01no542_p16.g1 CHROMAT_FILE:
MSMg01no542_p16.g1 PHD_FILE: MSMg01no542_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:11 2005
         (644 letters)



>mm_chr13_4648300_4649344
          Length = 1045

 Score = 1239 bits (641), Expect = 0.0
 Identities = 644/645 (99%), Gaps = 1/645 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   catgatgtcaggatgtcctcgagacatagtcttgaatggcacatggttataagaggctgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 catgatgtcaggatgtcctcgagacatagtcttgaatggcacatggttataagaggctgt 587

                                                                       
Query: 61  aacatttaccctggaaaaaaacatgtttgcttcaagcaacaattgacatttctggcttct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aacatttaccctggaaaaaaacatgtttgcttcaagcaacaattgacatttctggcttct 527

                                                                       
Query: 121 tgcctgaatgtcaagctctgtttcaaatcactttcactcatcattttgtgccttgacctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgcctgaatgtcaagctctgtttcaaatcactttcactcatcattttgtgccttgacctt 467

                                                                       
Query: 181 gcacctcaagctaatatcaaatcactgggactactggtgacttgcctttacttctaaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gcacctcaagctaatatcaaatcactgggactactggtgacttgcctttacttctaaaaa 407

                                                                       
Query: 241 tacatatccctgccaataacataaggatcaagttcctaagaagccatagttaacatatga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tacatatccctgccaataacataaggatcaagttcctaagaagccatagttaacatatga 347

                                                                       
Query: 301 aat-aaaaaaacagaacctataaaagtaacaaaagaactgtagatttggaaaatgttcaa 359
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aataaaaaaaacagaacctataaaagtaacaaaagaactgtagatttggaaaatgttcaa 287

                                                                       
Query: 360 aatattagtccattcttaagatcacatgaacctctgaacctccaatgtcctctgtgacag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aatattagtccattcttaagatcacatgaacctctgaacctccaatgtcctctgtgacag 227

                                                                       
Query: 420 ctatgaactgcagttgctagggatgattgaggtttgcatctgaaatatttcccataggct 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ctatgaactgcagttgctagggatgattgaggtttgcatctgaaatatttcccataggct 167

                                                                       
Query: 480 catatgtttgaatatctggctcatagatggtagggctgtttgagaatttgtgaaacttga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 catatgtttgaatatctggctcatagatggtagggctgtttgagaatttgtgaaacttga 107

                                                                       
Query: 540 cctactcccagattgtgagagtgggtctctgcagataaaactttgaaaattatagcatga 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 cctactcccagattgtgagagtgggtctctgcagataaaactttgaaaattatagcatga 47

                                                        
Query: 600 ctgttgtggatagccctggggctaattatatttgatgttaattcc 644
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46  ctgttgtggatagccctggggctaattatatttgatgttaattcc 2


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1045
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1035
Effective search space:   656190
Effective search space used:   656190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)