NCCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCACAAAACTGTAAACTAAAACTGTATTTCTTTCTTTCTTTTTAA
GATTGATTTATTTATTACATGTAAGTACACTGTGGCTGTCTTCAGACACT
CCAGAAGAGGGCTTCAGATCTCATTACAGATGGCTGTGAGCCACCATGTG
GTTGCTGAGATTTAAACTTGGGGCCTTCTGAACAGCAGTCAGTGCTCTTA
ACCACTTAGCCATCTCTCCAGACCCCCCTTTTTTGCATTTCTTTAGAAAC
TACACAGTCTGAGTTATTTTGTTAAGATAACAGAAAGTTCTGACACAGTG
ACAGAGTCTCAGAAGTCACATACCACTTCAACTACAATACTCTATTAATT
ATAATTTACTTATGTAAATGAATGTTCCTAGAAACTGCTCCTTCTGCAAA
GCCATTTAACTGATTAGACTTGCAGGAATTATAGAAAGGTTGGAATGGTT
GCAGGTACCTAACTAAAATTTATTTTGAGCTGTCTTTGTCCCCCTTATTA
GCTATTCATTTTTCACCTCTGTGTCCTATCTAACATCCCATGACTATCAG
GGGAGAACTTTGGATCTTAGCAGGCCAGGCTGCTACCTTCCATAAGCTTC
CAAAACTAGGAGTGTCATCCAGTAGCATCCAAGGCCTTAAAAAGAGCTTT
TCCCATTTTGCTACAACCATCCACCTAGATGTTGCCACCAGTGTATTTGA
AAAGTGTCT

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGAGCCCCATTAT
TTAATGGGGTTATTTGATTTGCTGGAGTCCACCTTCTTGAGTTCTTTACA
TATATTGGATATTAGTCCTCTATCTGATTTAGGATAGGTAAAGACACCAC
TTTCATCAATGGACAGATCGTAGAAACAGAAACTAAACAGGGACACAGTG
AAACTAACATAACTTATAAAACAAATGGACTTAAAAGATATCTACAGAAC
ATTTTATCCTAAAACAAAAGGATATACCTTCTTCTAAGCACTCACGGGAC
CTTATCCAAAATTGACCATATAATTGGTCACAAAACAGGCCTCAACAGAT
ACAAAAATATTGAAATTGTCCCATGCATCCTATCAGACCACCATGGACTA
AGGCTGATCTTCAATAACAACATAAATAATGGAAAACCAACATTCACATG
AAAATGAACAGCACTCTTCTCAATCATACCTTGGTCAAGGAAGGAATAAA
GAAAGAAATTAAAGACTTTTTAGAGTTTAATGAAAATGAAGCCACTACAT
ACCCTATATTATGGGACACTATGATAGCTTTTCTAATAGGGAAACTCTTA
GCTCTGAGTGCCTCCAAATTGAAACTAGAGAGAGTTCTCTCTTATCCTCT
TGACATCACCTCTTATAGTTCTTTTATAAAAATGTATCCCATTCTCTCCA
GTGGATTTCTT

Query= MSMg01no543_c20.b1 MSMg01no543_c20.b1 CHROMAT_FILE:
MSMg01no543_c20.b1 PHD_FILE: MSMg01no543_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:27 2005
         (703 letters)



>mm_chr13_20104858_20105954
          Length = 1097

 Score = 1259 bits (651), Expect = 0.0
 Identities = 687/705 (97%), Gaps = 12/705 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcacaaaactgtaaactaaaactgtatttctttctttctttttaagattgattta 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 ggaattcacaaaactgtaaactaaaactgtatttctttctttctttttaagattgattta 724

                                                                       
Query: 64  tttattacatgtaagtacactgtggctgtcttcagacactccagaagagggcttcagatc 123
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tttattacatgtaagtacattgtggctgtcttcagacactccagaagagggcttcagatc 664

                                                                       
Query: 124 tcattacagatggctgtgagccaccatgtggttgctgagatttaaacttggggccttctg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tcattacagatggctgtgagccaccatgtggttgctgagatttaaacttggggccttctg 604

                                                                       
Query: 184 aacagcagtcagtgctcttaaccacttagccatctctccagaccccccttttttgcattt 243
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 603 aacagcagtcagtgctcttaaccacttagccatctctccaga-cccccttttttgcattt 545

                                                                       
Query: 244 ctttagaaactacacagtctgagttattttgttaagataacagaaagttctgacacagtg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ctttagaaactacacagtctgagttattttgttaagataacagaaagttctgacacagtg 485

                                                                       
Query: 304 acagagtctcagaagtcacataccacttcaactacaatactctattaattataatttact 363
           | ||||||||||||||||||||||||||      ||||||||||||||||||||||||||
Sbjct: 484 atagagtctcagaagtcacataccactt------caatactctattaattataatttact 431

                                                                       
Query: 364 tatgtaaatgaatgttcctagaaactgctccttctgcaaagccatttaactgattagact 423
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tatgtaaatgaatgctcctagaaactgctccttctgcaaagccatttaactgattagact 371

                                                                       
Query: 424 tgcaggaattatagaaaggttggaatggttgcaggt-----acctaactaaaatttattt 478
           |||||||||| |||||||||||||||||||||||||     |||||||||||||||||||
Sbjct: 370 tgcaggaattgtagaaaggttggaatggttgcaggtacaaaacctaactaaaatttattt 311

                                                                       
Query: 479 tgagctgtctttgtcccccttattagctattcatttttcacctctgtgtcctatctaaca 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgagctgtctttgtcccccttattagctattcatttttcacctctgtgtcctatctaaca 251

                                                                       
Query: 539 tcccatgactatcaggggagaactttggatcttagcaggccaggctgctaccttccataa 598
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tcccatgactatcaggggagacctttggatcttagcaggccaggctgctaccttccataa 191

                                                                       
Query: 599 gcttccaaaactaggagtgtcatccagtagcatccaaggccttaaaaagagcttttccca 658
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gcttccaaaactaggagtgtcatccagtagcatccaaggccttaaaaagagcttttccca 131

                                                        
Query: 659 ttttgctacaaccatccacctagatgttgccaccagtgtatttga 703
           ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 130 ttttgctacaaccatccacctggatgttgccaccagtgtatttga 86


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1097
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1087
Effective search space:   753291
Effective search space used:   753291
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)