Query= MSMg01no543_k08.b1 MSMg01no543_k08.b1 CHROMAT_FILE:
MSMg01no543_k08.b1 PHD_FILE: MSMg01no543_k08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:05 2005
(213 letters)
>mm_chr13_98136800_98137412
Length = 613
Score = 412 bits (213), Expect = e-120
Identities = 213/213 (100%)
Strand = Plus / Plus
Query: 1 ttcatccaccgcagcatgacttcttgagggccagttttagaattttgatgttttctcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcatccaccgcagcatgacttcttgagggccagttttagaattttgatgttttctcttt 260
Query: 61 tctccttaaagagcgatttacattgcagagcagtttctggccttggcaagccagagagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctccttaaagagcgatttacattgcagagcagtttctggccttggcaagccagagagtg 320
Query: 121 agtgcctggacatttttgtttctttaaccaattatgaaggatggggaatctagcttggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgcctggacatttttgtttctttaaccaattatgaaggatggggaatctagcttggag 380
Query: 181 agattttggagcctatgaatttcattttaaaaa 213
|||||||||||||||||||||||||||||||||
Sbjct: 381 agattttggagcctatgaatttcattttaaaaa 413
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 613
Length adjustment: 9
Effective length of query: 204
Effective length of database: 604
Effective search space: 123216
Effective search space used: 123216
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no543_k08.g1 MSMg01no543_k08.g1 CHROMAT_FILE:
MSMg01no543_k08.g1 PHD_FILE: MSMg01no543_k08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:05 2005
(509 letters)
>mm_chr13_98284604_98285509
Length = 906
Score = 930 bits (481), Expect = 0.0
Identities = 501/509 (98%), Gaps = 3/509 (0%)
Strand = Plus / Minus
Query: 1 aatagtgaatgaaacagatgtatggaccgctgcctatggagtggttacaaagcaacggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 aatagtgaatgaaacagatgtatggaccgctgcctatggagtggttacaaagcaacggga 647
Query: 61 aagagagaaacatgttaatatctattacacatggtgttaagtggatagaggccgccactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 aagagagaaacatgttaatatctattacacatggtgttaagtggatagaggccgccactt 587
Query: 121 aggataactaataaggccctgtggacagagaactaaatttaaactaagacctaaagggta 180
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 586 aggataactaataaggccctgtggacagagaac---atttaaactaagacctagagggta 530
Query: 181 agaggaatgtgtgtgagcatccgaaggaaagaagctacctggtcagcgggacagtggtcc 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 529 agaggaatgtgtgtgagcatccgaaggaaagaagctacctggtcagtgggacagtggtcc 470
Query: 241 agcccttctccccacaaagccttgcttccaatcatgacttcctctttcttctacagcctc 300
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 469 agcccttctccccacaaagccttgcttccaatcaaggcttcctctttcttctacagcctc 410
Query: 301 ctctagcacttcatctgttccccaggacttaccacttaatcataagcctggtcgtattgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctctagcacttcatctgttccccaggacttaccacttaatcataagcctggtcgtattgt 350
Query: 361 tctcagatggttcctgtggttaaacttgtctcgtcaacaagttttgtcaacccactgagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tctcagatggttcctgtggttaaacttgtctcgtcaacaagttttgtcaacccactgagg 290
Query: 421 acagaaagcacgaacccccttttgtacggagtaccgtgtctgctgcagcgctggagcaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 acagaaagcacgaacccccttttgtacggagtaccgtgtctgctgcagcgctggagcaga 230
Query: 481 actgaccgggcagcattgacgtgcactga 509
||||||||||||||||||||||| |||||
Sbjct: 229 actgaccgggcagcattgacgtgaactga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 906
Length adjustment: 10
Effective length of query: 499
Effective length of database: 896
Effective search space: 447104
Effective search space used: 447104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
