TTTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCACCTGTTTCATACAAAATGGCAGAGAAGCACCTGAAAAAAT
GTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTAAGA
TTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAG
CAGATGCTGGCGAGGATGTGGAGAAAGAGGAACATTCCTCCATTGTTGGT
GGGATTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGTTCCTC
AGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGG
CATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTA
TGTTCATAGCAGCATTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGA
TGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAAT
GGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCA
AATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAA
AGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCCAAAC
CTAGGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAACTCAA
GAAAAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGAAGTGGGA
ACAAAACACCCTTGGAAG

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGGCAGAAGTACTGATAAAGC
CGTGTATTGTCTTGTAAATAAAGGCCAAATGACTGCTGCCACATGTCTGT
GTAAAGAGTTATAGCAATGGAGGCCATGGCTTTGATGCCTGGGTCATAAT
GGCCCAGACACTACTTACTTCCAGGTTGTTGACCACCTGCCTCCTGAACC
CGGAAAGATCATACAGGGACTAAAAGCAAGGCATGTACAAAGAACACAGG
GTACTTACTGGTTTTGCTAGAGTAATAAGAAAATGGCTGTGCAAAGAGAA
AGACCATTTTCTTAGATAAAAGACTTTTGTGTTTTACAAAGCTTTACTGG
CTATGTGCAGCCTTTTTCACTCTGATTTTGCATCAGTGGTTCTTCATTTG
TGAAGAGTTTTCTTCTCTTCTCTGCATGCCATTCAGAAAGTGCCATTTTC
TTCTTAGATTTCGTCCTCAAAGTGATATTTCAACAACAATGTGCCTTCAT
CTTCTTTATTCCTTTTTTCAGTAATGGCTTTTTGGACCCTAGCTATTATA
GAACTTCAATTTCACATAATACAGTATTCAAAAGGTATTTAGCCATGCAA
ATAAAGGAATTTACCATCCTATAAAATAAATTTATATCCAAAGAAATAAC
AGAAAAAGCTGTCTCTGGCTATCTGGTAAATTTCCGAGGTCATCCAGATC
GCCTT

Query= MSMg01no543_m15.g1 MSMg01no543_m15.g1 CHROMAT_FILE:
MSMg01no543_m15.g1 PHD_FILE: MSMg01no543_m15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:15 2005
         (652 letters)



>mm_chr13_5010390_5011441
          Length = 1052

 Score = 1191 bits (616), Expect = 0.0
 Identities = 643/652 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttcaggcagaagtactgataaagccgtgtattgtcttgtaaataaaggccaaatgactg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 tttcaggcagaagtactgataaagccgtgtattgtcttgtaaataaaggccaaatgactg 793

                                                                       
Query: 61  ctgccacatgtctgtgtaaagagttatagcaatggaggccatggctttgatgcctgggtc 120
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 792 ctgccacatgtctgtgtaaagagttatagcaacggaggccatggctttgatgcctgggtc 733

                                                                       
Query: 121 ataatggcccagacactacttacttccaggttgttgaccacctgcctcctgaacccggaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 732 ctaatggcccagacactacttacttccaggttgttgaccacctgcctcctgatcccggaa 673

                                                                       
Query: 181 agatcatacagggactaaaagcaaggcatgtacaaagaacacagggtacttactggtttt 240
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 672 agatcatacagggactaaaagcaaggcatgtataaagaacacagggtacttactggtttt 613

                                                                       
Query: 241 gctagagtaataagaaaatggctgtgcaaagagaaagaccattttcttagataaaagact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gctagagtaataagaaaatggctgtgcaaagagaaagaccattttcttagataaaagact 553

                                                                       
Query: 301 tttgtgttttacaaagctttactggctatgtgcagcctttttcactctgattttgcatca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tttgtgttttacaaagctttactggctatgtgcagcctttttcactctgattttgcatca 493

                                                                       
Query: 361 gtggttcttcatttgtgaagagttttcttctcttctctgcatgccattcagaaagtgcca 420
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 492 ggggttcttcatttgtgaagagttttcttctcttctctgcatgccattcagaaagcgcca 433

                                                                       
Query: 421 ttttcttcttagatttcgtcctcaaagtgatatttcaacaacaatgtgccttcatcttct 480
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttttcttcttagagtccgtcctcaaagtgatatttcaacaacaatgtgccttcatcttct 373

                                                                       
Query: 481 ttattccttttttcagtaatggctttttggaccctagctattatagaacttcaatttcac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttattccttttttcagtaatggctttttggaccctagctattatagaacttcaatttcac 313

                                                                       
Query: 541 ataatacagtattcaaaaggtatttagccatgcaaataaaggaatttaccatcctataaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ataatacagtattcaaaaggtatttagccatgcaaataaaggaatttaccatcctataaa 253

                                                               
Query: 601 ataaatttatatccaaagaaataacagaaaaagctgtctctggctatctggt 652
           |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 252 ataaatttatatccaaagaaataacagaaaaagctgtctctgactatctggt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space:   668964
Effective search space used:   668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)