Query= MSMg01no544_e17.b1 MSMg01no544_e17.b1 CHROMAT_FILE:
MSMg01no544_e17.b1 PHD_FILE: MSMg01no544_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:54 2005
(448 letters)
>mm_chr13_29846870_29847715
Length = 846
Score = 760 bits (393), Expect = 0.0
Identities = 424/437 (97%), Gaps = 8/437 (1%)
Strand = Plus / Minus
Query: 1 ttctctattg---tcatagcttttattttatgaagctagtttttgtgtcaaaaataattt 57
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ttctctattgaaa--atagcttttattttatgaagctagtttttgtgtcaaaaataattt 575
Query: 58 tcagaaatcacagtagtggtaaatccttggactttgaaaactatttttctccccaagtac 117
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 574 tcagaaatcacagtagtggtaaatccttggactttgaaaactatttttctcctcaagtac 515
Query: 118 aaaaaattttaaaacagaacatttgaaagaaatgatttaaaagttacgccatatgtgctg 177
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 514 -aaaaattttaaaacagaacatttgaaagaaatgatttaaaagttacgtcatatgtgctg 456
Query: 178 gtttctgtgggtaacattgacaaatgctcagctaatcttttctatattggcttctcttct 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gtttctgtgggtaacattgacaaatgctcagctaatcttttctatattggcttctcttct 396
Query: 238 atatagataaaacttttatacataatcatattaagtatctatttaaataactatatatct 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atatagataaaacttttatacataatcatattaagtatctatttaaataactatatatct 336
Query: 298 aattttatgaatacacgtttagttataactttttctttgagtgcttagattttttgagtt 357
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aattttatgaatacacctttagttataactttttctttgagtgcttagattttttgagtt 276
Query: 358 cttaatttactactgcaaacatagtagttaaataaatgaacatctttggctttgtttatt 417
|||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 275 cttaatttactactgcaaac--agtagttaaataaatgaacatctttagctttgtttatt 218
Query: 418 gttaacacatttttttt 434
||||| |||||||||||
Sbjct: 217 gttaatacatttttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 846
Length adjustment: 10
Effective length of query: 438
Effective length of database: 836
Effective search space: 366168
Effective search space used: 366168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_e17.g1 MSMg01no544_e17.g1 CHROMAT_FILE:
MSMg01no544_e17.g1 PHD_FILE: MSMg01no544_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:54 2005
(509 letters)
>mm_chr13_29702936_29703844
Length = 909
Score = 961 bits (497), Expect = 0.0
Identities = 506/509 (99%)
Strand = Plus / Plus
Query: 1 agggtgattaaacactattccagctgacaggtaattacagagcttctgcccataggagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggtgattaaacactattccagctgacaggtaattacagagcttctgcccataggagtt 260
Query: 61 tagatagggatggagaaaatgtgcctggaaacaccccaggagcatcctgagtggctttgc 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 tagatagggatggagaaaatgtgcctgcaaacaccccaggagcatcctgagtggctttgc 320
Query: 121 tactatggacagaacatgagcagagaggacagggcaggctcagattataaagtcagattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactatggacagaacatgagcagagaggacagggcaggctcagattataaagtcagattc 380
Query: 181 tgagattatggcttctctctcagtctgtgccagggtctcttctctagaaaagtggaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagattatggcttctctctcagtctgtgccagggtctcttctctagaaaagtggaatga 440
Query: 241 ggatggccacacccatgcattagttgggaaactgacctgaaagcaggcagtcgatccaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggatggccacacccatgcattagttgggaaactgacctgaaagcaggcagtcgatccaat 500
Query: 301 aacaagatccctatgacttgatcctccccataagcctctgcgcaaagatactcagatgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacaagatccctatgacttgatcctccccataagcctctgcgcaaagatactcagatgta 560
Query: 361 aattcaagccttgggaaattaaaattgctcttttttttcccccaaagaattaagaaatgg 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 aattcaagccttgggaaattaaaattgctctttttttccccccaaagaattaagaaatgg 620
Query: 421 ttaaaatgagaatactgctacatgaatgtcaaccatacacatagtaccagtacaatttgt 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaaaatgagaatactgatacatgaatgtcaaccatacacatagtaccagtacaatttgt 680
Query: 481 tgttatttcagctaagttctaaagtggtg 509
|||||||||||||||||||||||||||||
Sbjct: 681 tgttatttcagctaagttctaaagtggtg 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
