XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAACTGG
GGAATATCGAATGACTGAGAAGCACCTAAAGAAATGTTCAACATCCTTAG
TCATCAGGGAAATGCAAAACAAAATGACCCTGAGATTCCACCTCACATCA
GTCAGAATGGCTAAGATCAAAAACTCAGGTGACAGCAGATGCTGGCGAGG
ATGTAGAGAAAGAGGATCACTCCTCCATGGCCTTTGGAATTGCAAGCTGG
TACAACCACTCTGGAAATCAATCTGGTGATTTCTTAGAAAATTGGAAATA
CTTCTACCTGAGGACTGACCTATTCCATTCCTGGGCATATACCCAAAAGA
TGCTCCAACATATTACAAGGACATGTGCTCCATTATGTTTATAGCTGCCT
TATTTATAATAGCCAGAAGCTGGAAAAAAACCCCAGATGTCCCTCAATAG
AGGACTGGATACAGAAAATGCGATATATTTACACAATGGAGTACTACTTA
GCTATTAAAAGCAATAGGAGAATGCCAGGGCCAGGAAGCAGGACTAGGTT
GGTTGGTGAGCAGGGGGAAGGAGAGGGGAATAGGGGGTTTTTTAAAGAGA
AATCCCTGGATGGGGGAAAACATTTTGGAAGGATATTAAGGAAAATTTTT
TATAAAAAATTTCTTTTTTTCAAAGGCGCCTGGGTGGGGACCTACAAAAA
ATTTTTTCTCTTGATAACGGGGAACCTCCTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXCAAATTCATGTTGGGATTGGTCATCAAAATAAGAATA
TTGAAAAGTGATGACAGAACTCTCCTGCAATGATTCATGAATGGAGACAT
GTAGAATTCACGTTCAGGAATGGTGTATTTTGCTTAATGTCTGGCATAGT
TTGGAATTTGGTTTCCCTGTGCTTCTGTCACATGCCCACCCTTTTTCCTT
TTGCTGTTATGTTATTCATGGCGCATTATGTGGTCCTCATCAGGGTAGAA
CAGATGTGACTTCCCAAACTTCCTGTCTCTAAAACTATGAACTAAAAAAC
ATTTTAAGTTACATAGCCTCAGGTGCACTATATTGCATAATGCATCCTAA
AACTACATTATATTAGTTCCTGATTTTTTTTGGTTAAATAACTAATCAAT
GATTTTAAAAATTGTATCCATTTGAAGTGATATTCATCTAATCTGAACTT
AGTTTTATTAGATGGAGACTTTTATTCGATGGAGTGGCTGTTGAAAAGTC
ATCATTTCCTGAGTATGGAAGTCAGGGTGGTTGTTCATTCATTTCAGCTG
TTTGTTGTAGAAGACTTGACAAGACCACAGTTGTGCTTTACCTATTTTTT
TGTATGGACATTTGATAGCTTCTCCAGCAACATAGACTGTGTTCATGGGA
ACTGTGATTAAGCCACAAACTTCCTGTCCCTCTCTGCTACATCTG

Query= MSMg01no545_j04.g1 MSMg01no545_j04.g1 CHROMAT_FILE:
MSMg01no545_j04.g1 PHD_FILE: MSMg01no545_j04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:35 2005
         (622 letters)



>mm_chr13_78851986_78853007
          Length = 1022

 Score = 1172 bits (606), Expect = 0.0
 Identities = 618/622 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaattcatgttgggattggtcatcaaaataagaatattgaaaagtgatgacagaactct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaattcatgttgggattggtcatcaaaataagaatattgaaaagtgatgacagaactct 260

                                                                       
Query: 61  cctgcaatgattcatgaatggagacatgtagaattcacgttcaggaatggtgtattttgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgcaatgattcatgaatggagacatgtagaattcacgttcaggaatggtgtattttgc 320

                                                                       
Query: 121 ttaatgtctggcatagtttggaatttggtttccctgtgcttctgtcacatgcccaccctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaatgtctggcatagtttggaatttggtttccctgtgcttctgtcacatgcccaccctt 380

                                                                       
Query: 181 tttccttttgctgttatgttattcatggcgcattatgtggtcctcatcagggtagaacag 240
           ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 381 tttccttttgctgttatgttattcatggcgcgttatgtgatcctcatcagggtagaacag 440

                                                                       
Query: 241 atgtgacttcccaaacttcctgtctctaaaactatgaactaaaaaacattttaagttaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtgacttcccaaacttcctgtctctaaaactatgaactaaaaaacattttaagttaca 500

                                                                       
Query: 301 tagcctcaggtgcactatattgcataatgcatcctaaaactacattatattagttcctga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagcctcaggtgcactatattgcataatgcatcctaaaactacattatattagttcctga 560

                                                                       
Query: 361 ttttttttggttaaataactaatcaatgattttaaaaattgtatccatttgaagtgatat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttttttggttaaataactaatcaatgattttaaaaattgtatccatttgaagtgatat 620

                                                                       
Query: 421 tcatctaatctgaacttagttttattagatggagacttttattcgatggagtggctgttg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatctaatctgaacttagttttattagatggagacttttattcgatggagtggctgttg 680

                                                                       
Query: 481 aaaagtcatcatttcctgagtatggaagtcagggtggttgttcattcatttcagctgttt 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 681 aaaagtcatcatttcctgagtatggaagtcagggtggttgttcattcatttcggctgttt 740

                                                                       
Query: 541 gttgtagaagacttgacaagaccacagttgtgctttacctatttttttgtatggacattt 600
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 741 gttgtagaagacttgacaagaccacagttgtgctttacctatttttttgtatagacattt 800

                                 
Query: 601 gatagcttctccagcaacatag 622
           ||||||||||||||||||||||
Sbjct: 801 gatagcttctccagcaacatag 822


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space:   619344
Effective search space used:   619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)