Query= MSMg01no545_j22.b1 MSMg01no545_j22.b1 CHROMAT_FILE:
MSMg01no545_j22.b1 PHD_FILE: MSMg01no545_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:38 2005
(610 letters)
>mm_chr13_51960792_51961801
Length = 1010
Score = 1172 bits (606), Expect = 0.0
Identities = 609/610 (99%)
Strand = Plus / Minus
Query: 1 ttctcacggcatagccatttagcaaggcacgagcgatagccattctttttgccctgttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 ttctcacggcatagccatttagcaaggcacgagcgatagccattctttttgccctgttta 751
Query: 61 ttggaagtaatttgcaaccctgggacagaaagagcagtaaatatcacaagtgccagggac 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 750 ttggaagtaatttgcaaccctgggacagaaagaacagtaaatatcacaagtgccagggac 691
Query: 121 ataaggctgtgggaggaatgcttggttcatatttgtcctgctgggagacacaaaggctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ataaggctgtgggaggaatgcttggttcatatttgtcctgctgggagacacaaaggctag 631
Query: 181 tgtcacataacactggtgtgaaagagaagggacaagtccaaggacctcaaccatttatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tgtcacataacactggtgtgaaagagaagggacaagtccaaggacctcaaccatttatat 571
Query: 241 tttttgtgcagtgttggctggatgaggacagaacctgggaaatatggcaggaccctggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tttttgtgcagtgttggctggatgaggacagaacctgggaaatatggcaggaccctggac 511
Query: 301 gtcagcaggtgattgcagaacttcaggggaccccgaagcagagcctggaaggacaaaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gtcagcaggtgattgcagaacttcaggggaccccgaagcagagcctggaaggacaaaaca 451
Query: 361 ggtggaaaagctactagcaacacacaaatagataggcattccagaaggctgtgagagaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ggtggaaaagctactagcaacacacaaatagataggcattccagaaggctgtgagagaca 391
Query: 421 tggccaggccactgtgctaagatgccgtgcttggccaccaggacccctcccccttgcaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tggccaggccactgtgctaagatgccgtgcttggccaccaggacccctcccccttgcaag 331
Query: 481 acttagctggtcccaaagggtcccatcagcaccccctttcttggcctctcattcttgacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 acttagctggtcccaaagggtcccatcagcaccccctttcttggcctctcattcttgacc 271
Query: 541 taatcttactctttctttttttttttccttttgtcttctctgacacttagtaatagcaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 taatcttactctttctttttttttttccttttgtcttctctgacacttagtaatagcaca 211
Query: 601 tatttaattg 610
||||||||||
Sbjct: 210 tatttaattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_j22.g1 MSMg01no545_j22.g1 CHROMAT_FILE:
MSMg01no545_j22.g1 PHD_FILE: MSMg01no545_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:38 2005
(616 letters)
>mm_chr13_51826662_51827675
Length = 1014
Score = 1141 bits (590), Expect = 0.0
Identities = 609/616 (98%), Gaps = 2/616 (0%)
Strand = Plus / Plus
Query: 1 agaggacctgtccctggagagtcccagaaggggtccaggagctccggagtggctgcctga 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 agaggacctgtccctggagagtcccaggaggggtccaggagctccggagtggctgcctga 260
Query: 61 cacaaagctgttgtcccagctctggtgttcccaggcctcagagagtatccccagagccaa 120
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 cacaaagctgttgtcccagctctggtgttcccaggcctcagag--tatccccagagccaa 318
Query: 121 gatttccagttggcagggacgtgccctactgtagttacattggcaaagcccagctagcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gatttccagttggcagggacgtgccctactgtagttacattggcaaagcccagctagcta 378
Query: 181 gcaggagcagctggacatctccatctaagtcagcattcaatctcaagctacctcataggg 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 379 gcaggagcagctggacatctccatctaggtcagcattcaatctcaagctacctcataggg 438
Query: 241 gcaggcaagcctcagatggccttagctcagtcagctcatgccctaaacctgagcattggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gcaggcaagcctcagatggccttagctcagtcagctcatgccctaaacctgagcattggg 498
Query: 301 taggtgtcacgctgggtggccaggtacggagagtgaccgccatggtgccaatggaacagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 taggtgtcacgctgggtggccaggtacggagagtgaccgccatggtgccaatggaacagt 558
Query: 361 aacggaaacagggtgtgcgctaaggaggcagggagagccggacatgaagcagggttccgt 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 559 aacggaaacagggtgtgcgctaaggaggcagggagagccagacatgaagcagggttccgt 618
Query: 421 ggaggaccagtggccggccagctgcagagacctgggcaaaggcatgtcattgttatgatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ggaggaccagtggccggccagctgcagagacctgggcaaaggcatgtcattgttatgatg 678
Query: 481 ctgcttaaatcctgacaacaccatctctttgtatgggttggcgacctgtgagtcattctc 540
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 679 ctgcttaaatcctgacaacaccatttctttgtataggttggcgacctgtgagtcattctc 738
Query: 541 tcctcctccagccccacaggcccccaactagttcttactctcctccaggaccctgggtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tcctcctccagccccacaggcccccaactagttcttactctcctccaggaccctgggtat 798
Query: 601 tagtcctggatcccgc 616
||||||||||||||||
Sbjct: 799 tagtcctggatcccgc 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1014
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1004
Effective search space: 608424
Effective search space used: 608424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
