Query= MSMg01no545_k21.b1 MSMg01no545_k21.b1 CHROMAT_FILE:
MSMg01no545_k21.b1 PHD_FILE: MSMg01no545_k21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:43 2005
(702 letters)
>mm_chr13_4643732_4644833
Length = 1102
Score = 1324 bits (685), Expect = 0.0
Identities = 694/697 (99%)
Strand = Plus / Plus
Query: 6 gaattctaaatacactgaagacattactcacagccctttcacttataaaccatgggaagg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctaaatacactgaagacattactcacagccctttcacttataaaccatgggaagg 265
Query: 66 aagctctggactattagccgctatgctcaactagtccagctataaattagttacatatgg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aagctctggactattagccgctatgctcaactagtccagctataaattagttacatatgg 325
Query: 126 tttgccatcacctacgcagatctggaaagctctagacaaacacacttgcttagaaaagaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tttgccatcacctacgcagatctggaaagctctagacaaacacacttgcttagaaaagaa 385
Query: 186 aagcagagacaacctatagctgtggctgctctcctttgtcagttcaaaatcaaaacatga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aagcagagacaacctatagctgtggctgctctcctttgtcagttcaaaatcaaaacatga 445
Query: 246 aatctagagactatgaatagctattggtgggggtggtttagagttgaacagagcctgatg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aatctagagactatgaatagctattggtgggggtggtttagagttgaacagagcctgatg 505
Query: 306 tggctgacctacaaaactcggaaataaaaattgttataactctatgttacacatgctgaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tggctgacctacaaaactcggaaataaaaattgttataactctatgttacacatgctgaa 565
Query: 366 tttcaatgagacagtcacaattctgcctttttcaaaaaccctcataaaggatgtgatgtt 425
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 566 tttcaatgagacagtcacaatactgcctttttcaaaaaccctcataaagaatgtgatgtt 625
Query: 426 aggtttgattacatattttgcttcatctcttcgctagaatattatccatatgaaatgcca 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aggtttgattacatattttgcttcatctcttcgctagaatattatccatatgaaatgcca 685
Query: 486 ccattatgcttaaggatatattaaggaatgagagagaaattccagaacagggatggaggc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ccattatgcttaaggatatattaaggaatgagagagaaattccagaacagggatggaggc 745
Query: 546 atgtacatctcagtagtgttaagcaaaacaagatgcagcagccggttttattttaaagtc 605
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 746 atgtacatctcagtagtgttaagcaaaacaagatacagcagccggttttattttaaagtc 805
Query: 606 ataaccattagccacatgtcttttcacatttaagcaaagcccacagacatgtgagtgctt 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ataaccattagccacatgtcttttcacatttaagcaaagcccacagacatgtgagtgctt 865
Query: 666 tcctcaggttaccacagttcttattttccactgaaga 702
|||||||||||||||||||||||||||||||||||||
Sbjct: 866 tcctcaggttaccacagttcttattttccactgaaga 902
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1102
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1092
Effective search space: 755664
Effective search space used: 755664
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no545_k21.g1 MSMg01no545_k21.g1 CHROMAT_FILE:
MSMg01no545_k21.g1 PHD_FILE: MSMg01no545_k21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:43 2005
(431 letters)
>mm_chr13_4779200_4780030
Length = 831
Score = 818 bits (423), Expect = 0.0
Identities = 429/431 (99%)
Strand = Plus / Minus
Query: 1 agaactcagaatttgccaaaggaatcaacaagtgttaaaggtgtttcttgtgagcctact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 agaactcagaatttgccaaaggaatcaacaagtgttaaaggtgtttcttgtgagcctact 572
Query: 61 atgaggatttgctttgaatttaaattaaatgttagagaagtctaacactttcttttgtca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 571 atgaggatttgctttgaatttaaattaaatgttagagaagtctaacactttcttttatca 512
Query: 121 attttattaaactatgacacaggaaaacttgggaagtttctagagatgagggaacagata 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 511 attttattaaactatgacacaggaaaactttggaagtttctagagatgagggaacagata 452
Query: 181 gaccctctagagtaatctgttcaagaacattggaaattatagtgatattttgtcaatact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gaccctctagagtaatctgttcaagaacattggaaattatagtgatattttgtcaatact 392
Query: 241 tttaaatttgcaactgaattcctatagaagtacaaagttttgaatctgatttttgttata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tttaaatttgcaactgaattcctatagaagtacaaagttttgaatctgatttttgttata 332
Query: 301 aataaatggtgactaaatagatatgtttagtttgatgaaatggtacacaaggcatatatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aataaatggtgactaaatagatatgtttagtttgatgaaatggtacacaaggcatatatt 272
Query: 361 cactgaaacaatatataacaacattcatataggtggtacttgagttaaacattagttaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cactgaaacaatatataacaacattcatataggtggtacttgagttaaacattagttaaa 212
Query: 421 ataaatgtaat 431
|||||||||||
Sbjct: 211 ataaatgtaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
