Query= MSMg01no548_e18.b1 MSMg01no548_e18.b1 CHROMAT_FILE:
MSMg01no548_e18.b1 PHD_FILE: MSMg01no548_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:11 2005
(463 letters)
>mm_chr13_69331530_69332392
Length = 863
Score = 888 bits (459), Expect = 0.0
Identities = 459/459 (100%)
Strand = Plus / Plus
Query: 5 gaattcaaaaattttcacaaatactcttatctacagaagaagtgcagctttctcattaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaaattttcacaaatactcttatctacagaagaagtgcagctttctcattaca 264
Query: 65 caagttacaataacaaacaaaataaaataaaataataaaataaaaaagtaaaataaaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caagttacaataacaaacaaaataaaataaaataataaaataaaaaagtaaaataaaaaa 324
Query: 125 aaggcataggataaatttatggcagcctaaagcaagcacagtgtatggggaaatcttctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaggcataggataaatttatggcagcctaaagcaagcacagtgtatggggaaatcttctg 384
Query: 185 aagaggaagtgattgtaacagctgatgctgttctgatggcagcagggtgagatcagatgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagaggaagtgattgtaacagctgatgctgttctgatggcagcagggtgagatcagatgc 444
Query: 245 tgatgctgatgagtagggaagctgagatcaggggagtgagaagggggtagaggcaatgac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgatgctgatgagtagggaagctgagatcaggggagtgagaagggggtagaggcaatgac 504
Query: 305 agagaaggctgtagggaatagacagtgcacgtagagacgtctacagagcttgtggttccg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agagaaggctgtagggaatagacagtgcacgtagagacgtctacagagcttgtggttccg 564
Query: 365 atcccaagacacaaataaaacacaggggtgaaaaatattttatgtaattaagcattttct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atcccaagacacaaataaaacacaggggtgaaaaatattttatgtaattaagcattttct 624
Query: 425 ggctcccctatgtctactgtactaactacattgtctcag 463
|||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggctcccctatgtctactgtactaactacattgtctcag 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_e18.g1 MSMg01no548_e18.g1 CHROMAT_FILE:
MSMg01no548_e18.g1 PHD_FILE: MSMg01no548_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:11 2005
(525 letters)
>mm_chr13_69474181_69475105
Length = 925
Score = 1004 bits (519), Expect = 0.0
Identities = 523/525 (99%), Gaps = 2/525 (0%)
Strand = Plus / Minus
Query: 1 caggccggggagacaccatgccttagtttgaaggtggataacatgtgaagaaccaaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 caggccggggagacaccatgccttagtttgaaggtggataacatgtgaagaaccaaatct 812
Query: 61 gaggttgactctgactttcagaaacacacacacacacacacacacacacacacacacaca 120
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 811 gaggttgactctgactttcagaa--acacacacacacacacacacacacacacacacaca 754
Query: 121 cacacacacacacacacacacacacacaaactctctctttctctctgacaacattcactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 cacacacacacacacacacacacacacaaactctctctttctctctgacaacattcactt 694
Query: 181 tggctgtcattttagatccacttttgctgggcatagaattttcttcagcatctcttcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tggctgtcattttagatccacttttgctgggcatagaattttcttcagcatctcttcttt 634
Query: 241 aaagctgtcagtcattgtcttctgtctcccacttatcttacttaaaagtcagtatcaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aaagctgtcagtcattgtcttctgtctcccacttatcttacttaaaagtcagtatcaggc 574
Query: 301 ttctcccagcgtggctgcttcaagagctggggtttcttcctttccaaatggctgtggtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ttctcccagcgtggctgcttcaagagctggggtttcttcctttccaaatggctgtggtct 514
Query: 361 gcatgctctgcattcgcactgcttgtttagctatgtgttataaattttctgtttttcatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gcatgctctgcattcgcactgcttgtttagctatgtgttataaattttctgtttttcatc 454
Query: 421 agtatgcccaaatccatttcagagttctttttaaagcactacactgtctggttctttgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agtatgcccaaatccatttcagagttctttttaaagcactacactgtctggttctttgca 394
Query: 481 cacctgtttctcatggttgggacttggcatcatttgtctcacttg 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cacctgtttctcatggttgggacttggcatcatttgtctcacttg 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 111
Number of extensions: 36
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
