Query= MSMg01no548_g06.b1 MSMg01no548_g06.b1 CHROMAT_FILE:
MSMg01no548_g06.b1 PHD_FILE: MSMg01no548_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:18 2005
(442 letters)
>mm_chr13_90077094_90077936
Length = 843
Score = 739 bits (382), Expect = 0.0
Identities = 436/476 (91%), Gaps = 38/476 (7%)
Strand = Plus / Plus
Query: 5 gaattctaatctagaaaa-atttctactgaatatcctatgaatataccaagggaacattt 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gaattctaatctagaaaatatttctactgaatatcctatgaatataccaagggaacattt 227
Query: 64 tatatattttagtaaactttacaaagattatacctccctcagtaccataaactgaagcag 123
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tatatattttagtaaactttaaaaagattatacctccctcagtaccataaactgaagcag 287
Query: 124 aatatcatataaacaatgataagacataggacccattaattctctaccaacaactaaatg 183
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 288 aatatcatataaacaatgataagacataggacccattaattctctaccaacagctaaatg 347
Query: 184 ctttaaaacagtaacaatccatttgcaagagaagctaaggttaatggcagtaacctagaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ctttaaaacagtaacaatccatttgcaagagaagctaaggttaatggcagtaacctagaa 407
Query: 244 taaacgtaaattat-t---------tatatatatatatatatatataca----------- 282
|||||||||||||| | ||||||||||||||||||||||||
Sbjct: 408 taaacgtaaattatatatatatatatatatatatatatatatatatacatatacatatat 467
Query: 283 ---------------ctgttaatgagaaattttttgaaaaaaa-tgtgtttcagaagcta 326
|||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 468 atatatatatatacactgttaatgagaaattttttgaaaaaaaatgtgtttcagaagcta 527
Query: 327 tgctacacaaaaggcttgctttaaacagactaaatcatcggcatcctgccatgtcctcct 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tgctacacaaaaggcttgctttaaacagactaaatcatcggcatcctgccatgtcctcct 587
Query: 387 tacctccccccctccctcttagatgtctcaacctacttttttcttttaattattgc 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tacctccccccctccctcttagatgtctcaacctacttttttcttttaattattgc 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 843
Length adjustment: 9
Effective length of query: 433
Effective length of database: 834
Effective search space: 361122
Effective search space used: 361122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_g06.g1 MSMg01no548_g06.g1 CHROMAT_FILE:
MSMg01no548_g06.g1 PHD_FILE: MSMg01no548_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:18 2005
(403 letters)
>mm_chr13_90149340_90150142
Length = 803
Score = 756 bits (391), Expect = 0.0
Identities = 397/399 (99%)
Strand = Plus / Minus
Query: 5 ctaatatgatttactttggttcaaaattacgcttttaaaattaaaatttgaaataatcag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ctaatatgatttactttggttcaaaattacgcttttaaaattaaaatttgaaataatcag 544
Query: 65 ctcgtttttataattacctttaaaattccatagctctattttgtttccttttggctgagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ctcgtttttataattacctttaaaattccatagctctattttgtttccttttggctgagt 484
Query: 125 gcattatgtgaatttcaaaacctctgtaggaactctcagttggattgaggtcccttgagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gcattatgtgaatttcaaaacctctgtaggaactctcagttggattgaggtcccttgagt 424
Query: 185 gtcccttatacccatctatgaagatataagatttaatcctatcaggtccttacagccctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gtcccttatacccatctatgaagatataagatttaatcctatcaggtccttacagccctg 364
Query: 245 cctcagtaacttctgccccatttctttcttccattgtttgtgtacttgtgtctctgtttc 304
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 363 cctcagtaacttctgccccatttccttcttccattgtttgtgtacttgtgtctctgtttc 304
Query: 305 tctggcaatgactgttgctgtgtgactgtacactccatgctttggctcttgcagacagga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tctggcaatgactgttgctgtgtgactgtacactccatgctttggctcttgcagacagga 244
Query: 365 agtgatatttcaatttgaggtctagcattctccccgtgg 403
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 243 agtgatatttcaatttgaggtctagcattctccctgtgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space: 312836
Effective search space used: 312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
