BAC Information

Click to search

BAC

Clone NameB6Ng01-001K14
Chromosome14 (Build37)
Map Location 84,459,485 - 84,460,610
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776
Downstream geneLOC100043280, LOC100043285, Pcdh17, 9630013A20Rik, LOC629794
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001K14.bB6Ng01-001K14.g
ACCDH839918DH839919
length1,2221,122
definitionDH839918|Mus musculus domesticus DNA, BAC clone: B6Ng01-001K14, 5' end.DH839919|Mus musculus domesticus DNA, BAC clone: B6Ng01-001K14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcaatgactactgatttgttacttctgttaatactacattgaa
attaactgttttcagggtggagtctggctgctttggtttatgatagctaa
gcattagtgttagtaaaagtgtctgctacctgagggatacacagaaactg
ctctgaagaatttttatatagaacaaaggtaatatggtggtatttttaat
ttttaagattatctttttaattagtacttttaatacaactgtctttatta
ctactttgatagataatttcatgaaattaagtttttaacaactaacagta
tcttcaaagataacaaaaatatttattttttaatttaattttatttgtaa
ttcatttttacactccatttttccattccccacccctctcctactgccct
ccaactgttccacatcccacacctcctccccactatacctcatctccata
tggatgtccccaaccctccacctcatctgacccctaaactccctggagcc
tccagtctcttgagggttaggtgcatcatctctgaatgaacatcgacctg
aagtcctctactgtatgtgtgttggaagcctcatatcagctggtgtatgc
agtctgtttggtggtttagtgtttgaaagatctcaggggttcagaataaa
taagactgctggtcctcctataggatcacccttctcctcagcttctttca
gctttccctaattcaacaacaggggcgagctgcttctgtccatttgttgg
gtgcaaatatctgcatctgattctttcagctgcttgttgggtctttcggg
gggcaatcatactagatccctttttgtgagctctccatagacacactcag
taatagtgtcaggccttgggacttaccctttacctggatcctactttggg
cttgtcactggacctcttttcctcaggctcctctctacttccttccctgt
aattctttcagacaggaacatatgggtcatagtgtgacgtgagatggccc
cctcctccctcatttgatgcctgtctcctgctggaggtggctctatagtt
ccctcttcctactatctagcatttcatcaaaggttctccctgtgagtctg
ggagcctttcacctccagtcctggtgcactctggggtccccactccaatc
ctgaagtgccgttcatctttcgcagtcctaggactagtcctttgcctcac
caacatagaactgaggttgcat
gaattcacggcccatacctggacagaataaaagcaatgtacagcaaacca
atagccaacattaagctaaatggagagcaacttgaagcattcccaccaaa
atcagggacttgacaaggctgcccactctctccctaactattcaatacag
tacttgaaattctagccagagcaattagacaacaaaaggaggtcaaaggg
atacatattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatacttaaatgaccccaaaaattctactagagaacttctaaacc
tgatagagactgcatttataagaattatctttaaaacatattttcagaaa
tgctatagcaaaataatagaaaaagaatttaggaaaattggaagcatact
aaaaatttgaaagtataggcagacaccaacttggaactatgaagatgata
tttagttagatcgctgcctaatatcatgcttaaaattgattaatgttatc
tcttaagaacattttgttagtggaattcaagccatttcaacatttttatc
caaagcaaattaatgcattataattaataagaattaaagagacagcaaaa
agtaaaatgctgactcacatatctaggttcctacactcagcatgctatga
taaagtagagatttattaggctcttaattaattgctacattataatgata
ggggacaagtcatgaaaatgacttatgagggtataggcttttgctgtgtt
aactgaaaactcaagatgcacatacagtctaatttagaacaatatcacta
agcagtagattgcatggataaataatttggaagctaaagtggcaggtgta
aaaggagaaagacgtatcagcacagcaatcaatgctggagaaaaatatat
cctcaatagcgtcaataaattcaaaattgtttaggagtttcaagtactca
tgggtttgatactgaaaatttttaaggttttaattttttttaagacagtg
tttcctgtataggcctggatgtctggaactcactttgtagaccaggctga
cctcaaacttgacattcgcctgcctctgccttccagtgcctgggattaat
ggtgagcccaccatgcctggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_84459485_84460610
seq2: B6Ng01-001K14.g_71_1192

seq1  GAATTCACGGCCCATACCTGGACAGAATAAAAGCAATGTACAGCAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGGCCCATACCTGGACAGAATAAAAGCAATGTACAGCAAACCA  50

seq1  ATAGCCAACATTAAGCTAAATGGAGAGCAACTTGAAGCATTCCCACCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAACATTAAGCTAAATGGAGAGCAACTTGAAGCATTCCCACCAAA  100

seq1  ATCAGGGACTTGACAAGGCTGCCCACTCTCTCCCTAACTATTCAATACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGACTTGACAAGGCTGCCCACTCTCTCCCTAACTATTCAATACAG  150

seq1  TACTTGAAATTCTAGCCAGAGCAATTAGACAACAAAAGGAGGTCAAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGAAATTCTAGCCAGAGCAATTAGACAACAAAAGGAGGTCAAAGGG  200

seq1  ATACATATTGGAAAGGAGGAAGTCAAAATATCACTTTTTGCAGATGATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATTGGAAAGGAGGAAGTCAAAATATCACTTTTTGCAGATGATAT  250

seq1  GATAGTATACTTAAATGACCCCAAAAATTCTACTAGAGAACTTCTAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTATACTTAAATGACCCCAAAAATTCTACTAGAGAACTTCTAAACC  300

seq1  TGATAGAGACTGCATTTATAAGAATTATCTTTAAAACATATTTTCAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAGACTGCATTTATAAGAATTATCTTTAAAACATATTTTCAGAAA  350

seq1  TGCTATAGCAAAATAATAGAAAAAGAATTTAGGAAAATTGGAAGCATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATAGCAAAATAATAGAAAAAGAATTTAGGAAAATTGGAAGCATACT  400

seq1  AAAAATTTGAAAGTATAGGCAGACACCAACTTGGAACTATGAAGATGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTGAAAGTATAGGCAGACACCAACTTGGAACTATGAAGATGATA  450

seq1  TTTAGTTAGATCGCTGCCTAATATCATGCTTAAAATTGATTAATGTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTAGATCGCTGCCTAATATCATGCTTAAAATTGATTAATGTTATC  500

seq1  TCTTAAGAACATTTTGTTAGTGGAATTCAAGCCATTTCAACATTTTTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGAACATTTTGTTAGTGGAATTCAAGCCATTTCAACATTTTTATC  550

seq1  CAAAGCAAATTAATGCATTATAATTAATAAGAATTAAAGAGACAGCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAAATTAATGCATTATAATTAATAAGAATTAAAGAGACAGCAAAA  600

seq1  AGTAAAATGCTGACTCACATATCTAGGTTCCTACACTCAGCATGCTATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAATGCTGACTCACATATCTAGGTTCCTACACTCAGCATGCTATGA  650

seq1  TAAAGTAGAGATTTATTAGGCTCTTAATTAATTGCTACATTATAATGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAGAGATTTATTAGGCTCTTAATTAATTGCTACATTATAATGATA  700

seq1  GGGGACAAGTCATGAAAATGACTTATGAGGGTATAGGCTTTTGCTGTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACAAGTCATGAAAATGACTTATGAGGGTATAGGCTTTTGCTGTGTT  750

seq1  AACTGAAAACTCAAGATGCACATACAGTCTAATTAAGAACAATATCACTA  800
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACTGAAAACTCAAGATGCACATACAGTCTAATTTAGAACAATATCACTA  800

seq1  AGCAGTAGATTGCATGGATAAATAATTTGGAAGCTAAAGTGGCAGGTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTAGATTGCATGGATAAATAATTTGGAAGCTAAAGTGGCAGGTGTA  850

seq1  AAAGGAGAAAGACGTATCAGCACAGCAATCAATGCTGGAGAAAAATATA-  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAAGGAGAAAGACGTATCAGCACAGCAATCAATGCTGGAGAAAAATATAT  900

seq1  CCTCAATAG-GTCAATTAAATTCAAAATTGTTTAGGAGTTTCAAGTACTC  948
      ||||||||| ||||| ||||||||||||||||||||||||||||||||||
seq2  CCTCAATAGCGTCAA-TAAATTCAAAATTGTTTAGGAGTTTCAAGTACTC  949

seq1  ATGGGTTTGATACTGAAATTTTTTTAGGTTTTAATTTTTTTTTAAGACAG  998
      |||||||||||||||||| ||||| ||||||||| |||||||||||||||
seq2  ATGGGTTTGATACTGAAAATTTTTAAGGTTTTAA-TTTTTTTTAAGACAG  998

seq1  TGTTTCCCTGTATAGCCCTGGATGTTCTGGAACTCACTTTGTAGACCAGG  1048
      ||||| ||||||||| |||||||| |||||||||||||||||||||||||
seq2  TGTTT-CCTGTATAGGCCTGGATG-TCTGGAACTCACTTTGTAGACCAGG  1046

seq1  CTGACCTCAAACTTGGACATTCGCCTGCCTCTGCCTCCCAAGTG-CTGGG  1097
      |||||||||||||| ||||||||||||||||||||| || |||| |||||
seq2  CTGACCTCAAACTT-GACATTCGCCTGCCTCTGCCTTCC-AGTGCCTGGG  1094

seq1  ATTAAAGGTGTGAGCCACCATGCCTGGCA  1126
      ||||| |||| |  |||||||||||||||
seq2  ATTAATGGTGAG-CCCACCATGCCTGGCA  1122