BAC Information

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BAC

Clone NameB6Ng01-002F09
Chromosome14 (Build37)
Map Location 28,475,643 - 28,582,888
singlet/doubletdoublet
Overlap geneErc2
Upstream geneArf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370
Downstream geneLOC100040206, Wnt5a, LOC100040218
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002F09.bB6Ng01-002F09.g
ACCDH840394DH840395
length856616
definitionDH840394|Mus musculus domesticus DNA, BAC clone: B6Ng01-002F09, 5' end.DH840395|Mus musculus domesticus DNA, BAC clone: B6Ng01-002F09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,582,033 - 28,582,888)(28,475,643 - 28,476,256)
sequence
gaattcactatgctgtgtaggctggccttgaactcatagagatccacttt
ccaaaatcgcaaatgttgatggaagggacaaatgactagaaatcatttcc
tacaatcgaattccagaagaaatggggagcgtgatgagttctatgactat
taaatagtggtttaaaattatctaccctaaataaagcccagatgactcca
atttctgcactgtcttggagagcctccctattcatcactcgacacttgac
taacttgacgcaactgacagatttgaacatgaggaacataactcattgct
cagtctcatagccagaccatgagtactgctcacaaaaaagtcagactttt
aaaagaaatacaggacgtatatataacctagttgcacttcttttagagag
aaaaaaaaaagaacagtgattcagtcacagacaaacttttaatgtaaaac
atgacagagaaaggaagaaaaaaatacatcgtctgctcaaaatctagtca
ttcatgtttgtttgttttttaaatctaagcaaactaggaataaagagaac
caatcctaaagtatactccactgtatacaggaaatgaatacctagtacaa
gtgttagaagaattcccatttaaatgaaaggaagccatgcccaccatcag
caccacctagaaacattgtcctggaagcttgagtcaaaacactatgacca
gaaactgagtatatgacgaattgaaaagggaataattctaacattatcaa
ttgtattatattgctatgaacttagaaacatcaaaggaatctataaattg
gcccccccgggccgatactttcctactaatagggaatgacaaaatgagga
ggagga
gaattctggcatgggccatttcttctctttgtctctgtgaagctagcatt
tggctgcatcttggaagagacctgtggccattttgtcttttactaggaaa
ggaagaaacaaagaccaaagcagcagctaacttctcatttcatcctcttg
gcaggctgggaactacctactggtttagcaacatttattgatcaagctaa
cgtggtgtaactaggggtaagttttgtctcccagaagacatttgaaagtg
tctgaaaacattggtgtctggtacaaattggaggggggggtgatattatc
aatgaggaaagaaggacagagagacatgattgaggaagggacagtggtgg
ggtatgtggcagaggaggcagggcaagcaagatacaccatatgcattctg
gccaaataaagatcagaaaatggctggtgctttggaaacttatcacaaag
gatgggggaagcaactccaggactattaatttataggcagcgaggggtgg
gagatcaggactattaattctataggcagtgaggggtgagagaccatctc
tcacgacactcgttcaggacctctgatagcccttctcctgaatgaacaat
agtggcccttcagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28582033_28582888
seq2: B6Ng01-002F09.b_49_904 (reverse)

seq1  TCCTCCTCCTCATTTTGTCATTCCCTATTAGTAGGAAAGTATTTTTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||        
seq2  TCCTCCTCCTCATTTTGTCATTCCCTATTAGTAGGAAAGTATCGGCCCGG  50

seq1  TTCCTACAATTTATAGATTCCTTTGATGTTTCTAAGTTCATAGCAATATA  100
            ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCCAATTTATAGATTCCTTTGATGTTTCTAAGTTCATAGCAATATA  100

seq1  ATACAATTGATAATGTTAGAATTATTCCCTTTTCAATTCGTCATATACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATTGATAATGTTAGAATTATTCCCTTTTCAATTCGTCATATACTC  150

seq1  AGTTTCTGGTCATAGTGTTTTGACTCAAGCTTCCAGGACAATGTTTCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTGGTCATAGTGTTTTGACTCAAGCTTCCAGGACAATGTTTCTAG  200

seq1  GTGGTGCTGATGGTGGGCATGGCTTCCTTTCATTTAAATGGGAATTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCTGATGGTGGGCATGGCTTCCTTTCATTTAAATGGGAATTCTTC  250

seq1  TAACACTTGTACTAGGTATTCATTTCCTGTATACAGTGGAGTATACTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTTGTACTAGGTATTCATTTCCTGTATACAGTGGAGTATACTTTA  300

seq1  GGATTGGTTCTCTTTATTCCTAGTTTGCTTAGATTTAAAAAACAAACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGTTCTCTTTATTCCTAGTTTGCTTAGATTTAAAAAACAAACAAA  350

seq1  CATGAATGACTAGATTTTGAGCAGACGATGTATTTTTTTCTTCCTTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATGACTAGATTTTGAGCAGACGATGTATTTTTTTCTTCCTTTCTC  400

seq1  TGTCATGTTTTACATTAAAAGTTTGTCTGTGACTGAATCACTGTTCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGTTTTACATTAAAAGTTTGTCTGTGACTGAATCACTGTTCTTTT  450

seq1  TTTTTTCTCTCTAAAAGAAGTGCAACTAGGTTATATATACGTCCTGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTCTCTAAAAGAAGTGCAACTAGGTTATATATACGTCCTGTATT  500

seq1  TCTTTTAAAAGTCTGACTTTTTTGTGAGCAGTACTCATGGTCTGGCTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAAAAGTCTGACTTTTTTGTGAGCAGTACTCATGGTCTGGCTATG  550

seq1  AGACTGAGCAATGAGTTATGTTCCTCATGTTCAAATCTGTCAGTTGCGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAGCAATGAGTTATGTTCCTCATGTTCAAATCTGTCAGTTGCGTC  600

seq1  AAGTTAGTCAAGTGTCGAGTGATGAATAGGGAGGCTCTCCAAGACAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGTCAAGTGTCGAGTGATGAATAGGGAGGCTCTCCAAGACAGTGC  650

seq1  AGAAATTGGAGTCATCTGGGCTTTATTTAGGGTAGATAATTTTAAACCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTGGAGTCATCTGGGCTTTATTTAGGGTAGATAATTTTAAACCAC  700

seq1  TATTTAATAGTCATAGAACTCATCACGCTCCCCATTTCTTCTGGAATTCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATAGTCATAGAACTCATCACGCTCCCCATTTCTTCTGGAATTCG  750

seq1  ATTGTAGGAAATGATTTCTAGTCATTTGTCCCTTCCATCAACATTTGCGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGGAAATGATTTCTAGTCATTTGTCCCTTCCATCAACATTTGCGA  800

seq1  TTTTGGAAAGTGGATCTCTATGAGTTCAAGGCCAGCCTACACAGCATAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAAAGTGGATCTCTATGAGTTCAAGGCCAGCCTACACAGCATAGT  850

seq1  GAATTC  856
      ||||||
seq2  GAATTC  856

seq1: chr14_28475643_28476256
seq2: B6Ng01-002F09.g_69_683

seq1  GAATTCTGGCATGGGCCATTTCTTCTCTTTGTCTCTGTGAAGCTAGCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCATGGGCCATTTCTTCTCTTTGTCTCTGTGAAGCTAGCATT  50

seq1  TGGCTGCATCTTGGAAGAGACCTGTGGCCATTTTGTCTTTTACTAGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCATCTTGGAAGAGACCTGTGGCCATTTTGTCTTTTACTAGGAAA  100

seq1  GGAAGAAACAAAGACCAAAGCAGCAGCTAACTTCTCATTTCATCCTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAACAAAGACCAAAGCAGCAGCTAACTTCTCATTTCATCCTCTTG  150

seq1  GCAGGCTGGGAACTACCTACTGGTTTAGCAACATTTATTGATCAAGCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTGGGAACTACCTACTGGTTTAGCAACATTTATTGATCAAGCTAA  200

seq1  CGTGGTGTAACTAGGGGTAAGTTTTGTCTCCCAGAAGACATTTGAAAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTGTAACTAGGGGTAAGTTTTGTCTCCCAGAAGACATTTGAAAGTG  250

seq1  TCTGAAAACATTGGTGTCTGGTACAAATTGGAGGGGGGGGTGATATTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAACATTGGTGTCTGGTACAAATTGGAGGGGGGGGTGATATTATC  300

seq1  AATGAGGAAAGAAGGACAGAGAGACATGATTGAGGAAGGGACAGTGGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGAAAGAAGGACAGAGAGACATGATTGAGGAAGGGACAGTGGTGG  350

seq1  GGTATGTGGCAGAGGAGGCAGGGCAAGCAAGAGACACCATATGCATTCTG  400
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGTATGTGGCAGAGGAGGCAGGGCAAGCAAGATACACCATATGCATTCTG  400

seq1  GCCAAATAAAGATCAGAAAATGGCTGGTGCTTTGGAAACTTATCACAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATAAAGATCAGAAAATGGCTGGTGCTTTGGAAACTTATCACAAAG  450

seq1  GATGGGGGAAGCAACTCCAGGACTATTAATTTATAGGCAGCGAGGGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGGGAAGCAACTCCAGGACTATTAATTTATAGGCAGCGAGGGGTGG  500

seq1  GAGATCAGGACTATTAA-TCTATAGGCAGTGAGGGGTGAGAGACCATCTC  549
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAGATCAGGACTATTAATTCTATAGGCAGTGAGGGGTGAGAGACCATCTC  550

seq1  TCAGGACACTCGTTCAGGACCTCTGAGAGCCCTTCTCCTGAATGAACAAG  599
      ||| |||||||||||||||||||||| |||||||||||||||||||||| 
seq2  TCACGACACTCGTTCAGGACCTCTGATAGCCCTTCTCCTGAATGAACAAT  600

seq1  AGTGGCCCTTCAGGG  614
      |||||||||||||||
seq2  AGTGGCCCTTCAGGG  615