BAC Information

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BAC

Clone NameB6Ng01-002H11
Chromosome14 (Build37)10 (Build37)
Map Location 83,765,666 - 83,765,706109,839,534 - 109,839,980
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002H11.bB6Ng01-002H11.g
ACCDH840480DH840481
length886441
definitionDH840480|Mus musculus domesticus DNA, BAC clone: B6Ng01-002H11, 5' end.DH840481|Mus musculus domesticus DNA, BAC clone: B6Ng01-002H11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(83,765,666 - 83,765,706)(109,839,534 - 109,839,980)
sequence
gaattctcacccgaggaataccgaatggcacagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgttggcgtggatgtggagaaagaggaacactcctccgtttttgatg
ggattgcaggcttgtacaaccactctggaagtcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gtgtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatacgtactcactgataagtggatattagccccaaacc
taggattcccaagatataagatacaatttgctaaaacacatgaaactcaa
gaagaatgaagactgaagtgtcgacactatgcccctccttagaattggga
acaaaatacccatggatggagttacagagacagattttggagctgagatg
aaaaggatggatcatgtagagactgccatatcctgggatccaccccataa
tcagccccccccgtgtggcgaccattgtatattttattaatatttttttt
ttttttctctattttcttttttttttttttttttta
atctgacctctgaagatgcaaaacagttcatgatacagccaggctcaaag
aactactcaagcatctctgaccaccatctccagtaacagataacactgaa
caaacatcactgtgtcagcagggtgtttccctaaggcatgggagcattag
gaatgaccagaatcaaggatacctcagaggtatctgttccttctactaac
caaagctagtgaaatctctagcacgcattagaaaccgtgttgagtctttt
ggtccataaaagcaagtcaattgaatgcagctgaaacatggtagtattgt
ggagagtggacgggtagagcaacttgaaacgggtagaacacttgaaagga
agactggcaatgtggagactgtgagcacatggttgtaccattgtaagcac
tggggattgtatggtaggggtggaaagaggaggagaaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83765666_83765706
seq2: B6Ng01-002H11.b_887_932 (reverse)

seq1  TAAAAAAAAAAAAAAAAAAAAAAAA-----AAAAAAAAGAAAAATA  41
      |||||||||||||||||||| ||||     |||||||| |||||||
seq2  TAAAAAAAAAAAAAAAAAAAGAAAATAGAGAAAAAAAAAAAAAATA  46

seq1: chr10_109839534_109839980
seq2: B6Ng01-002H11.g_67_513

seq1  GAATTCATCTGACCTCTGAAGATGCAAAACAGTTCATGATACAGCCAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGACCTCTGAAGATGCAAAACAGTTCATGATACAGCCAGGC  50

seq1  TCAAAGAACTACTCAAGCATCTCTGACCACCATCTCCAGTAACAGATAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAACTACTCAAGCATCTCTGACCACCATCTCCAGTAACAGATAAC  100

seq1  ACTGAACAAACATCACTGTGTCAGCAGGGTGTTTCCCTAAGGCATGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACAAACATCACTGTGTCAGCAGGGTGTTTCCCTAAGGCATGGGAG  150

seq1  CATTAGGAATGACCAGAATCAAGGATACCTCAGAGGTATCTGTTCCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGAATGACCAGAATCAAGGATACCTCAGAGGTATCTGTTCCTTCT  200

seq1  ACTAACCAAAGCTAGTGAAATCTCTAGCACGCATTAGAAACCGTGTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACCAAAGCTAGTGAAATCTCTAGCACGCATTAGAAACCGTGTTGAG  250

seq1  TCTTTTGGTCCATAAAAGCAAGTCAATTGAATGCAGCTGAAACATGGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGGTCCATAAAAGCAAGTCAATTGAATGCAGCTGAAACATGGTAG  300

seq1  TATTGTGGAGAGTGGACGGGTAGAGCAACTTGAAACGGGTAGAACACTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGGAGAGTGGACGGGTAGAGCAACTTGAAACGGGTAGAACACTTG  350

seq1  AAAGGAAGACTGGCAATGTGGAGACTGTGAGCACATGGTTGTACCATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGACTGGCAATGTGGAGACTGTGAGCACATGGTTGTACCATTGT  400

seq1  AAGCACTGGGGATTGTATGGTAGGGGTGGAAAGAGGAGGAGAAGGGA  447
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTGGGGATTGTATGGTAGGGGTGGAAAGAGGAGGAGAAGGGA  447