BAC Information

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BAC

Clone NameB6Ng01-004L14
Chromosome14 (Build37)18 (Build37)
Map Location 61,439,600 - 61,440,14041,989,820 - 41,990,264
singlet/doubletsingletsinglet
Overlap geneMipep
Upstream geneAtp8a2, LOC668162, LOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9
Downstream geneLOC100043586, Tnfrsf19, Sacs, Sgcg, Arl11, EG432864, Ebpl, Kpna3, LOC100042933, EG432865, 6330409N04Rik, LOC100042941, Trim13, Kcnrg, LOC668253
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004L14.bB6Ng01-004L14.g
ACCDH842058DH842059
length958439
definitionDH842058|Mus musculus domesticus DNA, BAC clone: B6Ng01-004L14, 5' end.DH842059|Mus musculus domesticus DNA, BAC clone: B6Ng01-004L14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(61,439,600 - 61,440,140)(41,989,820 - 41,990,264)
sequence
gaattcactggtcttaccacgttccccaccatcctgaagcagctggtctg
atagaaagatggaatggccttttgaagacgcagttacagcgccaattagg
tggtaacagcttggaaggctggggtagagttcttcagaaggcagtatatg
ctttgaatcagcgctcgatatatggtacagtttcacccatagccaggatt
catgggtccaggaatcaaggggtggaaaaaggaatagttccacttactat
cactcctagtgaccctctaggaaaatttttgcttcctgtccccataactc
taggttctgctggcctagaaggtttggctccagagaggggagtgctccta
ccaggagctacaacaaacattccattgaactggaagctcagacttccccc
tggtcattttgggcttctaatgcccttaaaccaacaggctaaaaaaggaa
taacagtgttaggaggggtgatagatccagattaccatggggaatttgga
ttatctcttcacaatggtggtaagcatgattatgtctggagtgtaggaga
tcccttagtgtgtctcttagtattaccatgtcctgtgattaaagtcaatg
ggaaactacaacagcctaatccaagcaggatgacaaaggacgaagaccca
tcaggaatgaaggtatgggtcaatcctccaggaaaagagccaagacctgc
tgaggtgctggctgaaggtgaaggaaatacagaatgggtagtagaggaag
gtagttataaataccaattaatgccacgtaaccagttgcagaaacgagga
ttataaagtaatatgaatgccccattgtaaatttacaaatgcgtttgcga
ttgtacgagggatagttatatcatgttagcgtattcacaaccttgttatt
gtttcgtgtgaacaatgagatattatttgtgtcaagttgacaagggttgg
attgtagt
aatggtaaaaaccatgaaagaacactgcttccttccagctagcttcctta
tgtatcccaggaccacctgccaaaggaatggtactgcccacagtgagctg
ggcactcctatatcatttaacaaccaagacatgcctatagaccaacctat
taaagacaattactcagctgagagtcctttattcccccaggtgactctag
gctgtgtcaaattgtcagttaatgccaactaggacacataggcaatatgc
acaccacatgaacatacagatggatggggaaagaagctgaatgcaataat
gtaagcctcttatgtccaatgctcaggaggctggggagggaggataaaga
gtttgagataattttgaactatgtaaggaaagcaatcttaaataaataaa
taaataaataaataagagggggatagggatggagggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_61439600_61440140
seq2: B6Ng01-004L14.b_460_1001 (reverse)

seq1  ACTACAATCCACCCCTTGTCAACTTGACACAAATAATATCTCA-TGTTCA  49
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  ACTACAATCCAACCCTTGTCAACTTGACACAAATAATATCTCATTGTTCA  50

seq1  CATGAAACAATAACAAGGTTGTAAATACGCCTAACATGATATAACTATCC  99
      || ||||||||||||||||||| |||||| ||||||||||||||||||||
seq2  CACGAAACAATAACAAGGTTGTGAATACG-CTAACATGATATAACTATCC  99

seq1  CTCGTACAATCGCAAACGCATTAGTAAATTTACAAT-GGGCATTCATATT  148
      |||||||||||||||||||||| ||||||||||||| |||||||||||||
seq2  CTCGTACAATCGCAAACGCATTTGTAAATTTACAATGGGGCATTCATATT  149

seq1  ACTTTATAATCCTCGTTTCTGCAACTGGTTACGTGGCCTTAATTGGTATT  198
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACTTTATAATCCTCGTTTCTGCAACTGGTTACGTGGCATTAATTGGTATT  199

seq1  TATAACTACCTTCCTCTACTACCCATTCTGTATTTCCTTCACCTTCAGCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTACCTTCCTCTACTACCCATTCTGTATTTCCTTCACCTTCAGCC  249

seq1  AGCACCTCAGCAGGTCTTGGCTCTTTTCCTGGAGGATTGACCCATACCTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTCAGCAGGTCTTGGCTCTTTTCCTGGAGGATTGACCCATACCTT  299

seq1  CATTCCTGATGGGTCTGCGTCCTTTGTCATCCTGCTTGGATTAGGCTGTT  348
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CATTCCTGATGGGTCTTCGTCCTTTGTCATCCTGCTTGGATTAGGCTGTT  349

seq1  GTAGTTTCCCATTGACTTTAATCACAGGACATGGTAGTACTAAGAGACGC  398
      |||||||||||||||||||||||||||||||||||| ||||||||||| |
seq2  GTAGTTTCCCATTGACTTTAATCACAGGACATGGTAATACTAAGAGACAC  399

seq1  CCTAAGGGATCTCCTGCACTCCAGACATAATCTTGCTTACCACCATTGTG  448
       |||||||||||||| |||||||||||||||| |||||||||||||||||
seq2  ACTAAGGGATCTCCTACACTCCAGACATAATCATGCTTACCACCATTGTG  449

seq1  AAGAGGTAATCCAATTTCCCCATGGTAATCTGGATCTATCACCCCTCCTA  498
      ||||| |||||||| |||||||||||||||||||||||||||||||||||
seq2  AAGAGATAATCCAAATTCCCCATGGTAATCTGGATCTATCACCCCTCCTA  499

seq1  ACACTGTTATTCCTTTTTTAGCCTGTTGGTTTAAGGGCATTAG  541
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTTATTCCTTTTTTAGCCTGTTGGTTTAAGGGCATTAG  542

seq1: chr18_41989820_41990264
seq2: B6Ng01-004L14.g_66_510

seq1  GAATTCAATGGTAAAAACCATGAAAGAACACTGCTTCCTTCCAGCTAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGTAAAAACCATGAAAGAACACTGCTTCCTTCCAGCTAGCT  50

seq1  TCCTTATGTATCCCAGGACCACCTGCCAAAGGAATGGTACTGCCCACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATGTATCCCAGGACCACCTGCCAAAGGAATGGTACTGCCCACAGT  100

seq1  GAGCTGGGCACTCCTATATCATTTAACAACCAAGACATGCCTATAGACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGGCACTCCTATATCATTTAACAACCAAGACATGCCTATAGACCA  150

seq1  ACCTATTAAAGACAATTACTCAGCTGAGAGTCCTTTATTCCCCCAGGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATTAAAGACAATTACTCAGCTGAGAGTCCTTTATTCCCCCAGGTGA  200

seq1  CTCTAGGCTGTGTCAAATTGTCAGTTAATGCCAACTAGGACACATAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGCTGTGTCAAATTGTCAGTTAATGCCAACTAGGACACATAGGCA  250

seq1  ATATGCACACCACATGAACATACAGATGGATGGGGAAAGAAGCTGAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCACACCACATGAACATACAGATGGATGGGGAAAGAAGCTGAATGC  300

seq1  AATAATGTAAGCCTCTTATGTCCAATGCTCAGGAGGCTGGGGAGGGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTAAGCCTCTTATGTCCAATGCTCAGGAGGCTGGGGAGGGAGGA  350

seq1  TAAAGAGTTTGAGATAATTTTGAACTATGTAAGGAAAGCAATCTTAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGTTTGAGATAATTTTGAACTATGTAAGGAAAGCAATCTTAAATA  400

seq1  AATAAATAAATAAATAAATAAGAGGGGGATAGGGATGGAGGGATG  445
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATAAATAAATAAGAGGGGGATAGGGATGGAGGGATG  445