BAC Information

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BAC

Clone NameB6Ng01-004O18
Chromosome14 (Build37)
Map Location 60,387,204 - 60,530,747
singlet/doubletdoublet
Overlap geneAtp8a2
Upstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46
Downstream geneLOC668162, LOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9, Mipep, LOC100043586
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004O18.bB6Ng01-004O18.g
ACCDH842203DH842204
length1,1241,093
definitionDH842203|Mus musculus domesticus DNA, BAC clone: B6Ng01-004O18, 5' end.DH842204|Mus musculus domesticus DNA, BAC clone: B6Ng01-004O18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,529,630 - 60,530,747)(60,387,204 - 60,388,286)
sequence
gaattcttttctttctacttggtttatgttgccaggggcttcttttacct
gacagcctctcctacctgacagcttctccccacctgacagcctctcccca
cctgacagcctctccccacctgacaacctctccccacctgacagcctctc
cccacctgacaacctctccccacctgacagcctctccccacctgacagcc
tctccccacctgacaacctctccccacctgacagcctctccccacctgac
agcttctcccccctgacagcctctccccacctgaaagcttctccctgcct
aacagcttctccctgcctgactgacagtttcttcacacctgattggcaac
ctccctgcacctgacagctactcccaatctgacaacccctcccacctgac
tgacagcctttccctatctgacagcctgttctcacttgatacctatgccc
agctgagagctcccccaccacctgagggcccatctcctcctcacagagcc
ttttctttcctgagagcctctcaccctgaaagcttctccccctgacagca
tctcttcctgacaggttctccctgcatgcatctctttctcctgtatacac
tgatcttttgtctaagtactgataactcctgtctccactacagattcctg
cttcattagagcagggatttttttctcttttccccttttgttctgtggcc
cactccagccttgagtttacaggccaagtcgacatccatctcatggcagc
tgctgaagctgtggtaagaattgagggtggttgtcacatgggcagtgaca
tcatgaatggtgccagagtcaccctcactctccttttatagtttttcctc
tgcaggactctttgctcttccacccccagtcctcctattctaggaaactg
ccatccattatcaggaaaggaagaaaagcctctcatgtctgagttcccat
attttaattgatagctggatactggaagaagaaaatgaaacactgaccaa
aattgggcaaatgctttttattttccaaaacacatcttattcttttctta
ttctcatgtcacttctagaggaccattgggctttttctgtagcgctgcac
tgtctgttgcttacctactttgtg
gaattccttaaagtccttggaatgctgtgtctttagaaagagtccccagg
tagcttccttgacttcacagatgttcactgagacttcctgggtggctgct
gggctttccgtgtcacatcacaaggtgccacagggaagatgaacctctga
cagtggaaaagagctttcattctccacccttccttccctgtgcccgcgag
ggaagacctgccttcaaccccgtgagaaaaactccaaatggaatagacta
gacaaagaaatacttaatcacattggtgggggaaaatctcagtagaaaca
atgtatcttttcaatgactgaagatgctatgaatagacagactgcttgct
gctgcatctgtctctggctctgggttggggtgggagaagggtaatatttg
ccattattagatactactttaattcttaaagcttcaaagaattatgttca
tttgccaaaaccccactgtgtagccaactacaaagaatcatttatgaaaa
tcactgggagcattcttaatttttttttttgagacagggtttccctgtgt
agtcctggttgtcctggaattcactatgtagagcaggctagccttgagct
cagagatccacgtgcctcttgccccggactgctgggattaaaggtgtgtg
cctccacctcctggtgcagtcttcaaatattaatttctacaaacatcctt
tccctaggatgctccttattcttaggcgtagcttgggcatgttgcaatag
ttcctcttgggagccttcctcctctggtcagcccgaacccagctactgtc
tcttttcgacacagtttcctcccgtgactggagagagacccttctcaggc
ttcacctgggacgtcgggctagccccaggtgctcttttctacacgtgtga
tttgtcagcatcatacccagtcctgacaccttctcgggaatcaagagact
gctgattcagatagcaaggtgagatgctgcttctatgccttggcatggaa
agccatgcttttgatctctcctcctcctccctatggtggattctactcca
gcgaaagaactaggaatgctgaagacgatacattgatggaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_60529630_60530747
seq2: B6Ng01-004O18.b_48_1171 (reverse)

seq1  CACAAAGTAG--TAGCAACAGACAGTGCAGCGCTTACAGACAAAG-CCAA  47
      ||||||||||   |||||||||||||||||||| |||||| |||| ||||
seq2  CACAAAGTAGGTAAGCAACAGACAGTGCAGCGC-TACAGAAAAAGCCCAA  49

seq1  T-GTCCTCTTAAGAAGTGACATGAGAATAAG-AAAGAATAAGGAATGTG-  94
      | |||||||  |||||||||||||||||||| ||||||||||  ||||| 
seq2  TGGTCCTCT--AGAAGTGACATGAGAATAAGAAAAGAATAAG--ATGTGT  95

seq1  TTTGGAAAATAAAAAGCATTTGCCCAATTTTTGGTCCGTGTTTCATTTTC  144
      ||||||||||||||||||||||||||| |||||||| |||||||||||||
seq2  TTTGGAAAATAAAAAGCATTTGCCCAA-TTTTGGTCAGTGTTTCATTTTC  144

seq1  TCCTTCCAGTATCCAGCTATCAATTAAAATATGGGAACTCAGACATGAGA  194
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCAGTATCCAGCTATCAATTAAAATATGGGAACTCAGACATGAGA  194

seq1  GGCTTTTCTTCC-TTCCTGATAATGGATGGCAGTTTCCTAGAATAGGAGG  243
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTCTTCCTTTCCTGATAATGGATGGCAGTTTCCTAGAATAGGAGG  244

seq1  ACT-GGGGTGGAAGAGC-AAGAGTCCTGCAGAGGAAAAACTAT-AAAGGA  290
      ||| ||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  ACTGGGGGTGGAAGAGCAAAGAGTCCTGCAGAGGAAAAACTATAAAAGGA  294

seq1  GAGTGAGGGTGACTCTGGCACCATTCATGATGTCACTGCCCATGTGACAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGGGTGACTCTGGCACCATTCATGATGTCACTGCCCATGTGACAA  344

seq1  CCACCCTC-ATTCTTACCACAGCTTCAGCAGCTGCCATGAGATGGATGTC  389
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTCAATTCTTACCACAGCTTCAGCAGCTGCCATGAGATGGATGTC  394

seq1  GACTTGGCCTGTAAACTCAAGGCTGGAGTGGGCCACAGAAC-AAAGGGGA  438
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GACTTGGCCTGTAAACTCAAGGCTGGAGTGGGCCACAGAACAAAAGGGGA  444

seq1  AAAGAGAAAAAAATCCCTGCTCTAATGAAGCAGGAATCTGTAGTGGAGAC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAAAAAATCCCTGCTCTAATGAAGCAGGAATCTGTAGTGGAGAC  494

seq1  AGGAGTTATCAGTACTTAGACAAAAGATCAGTGTATACAGGAGAAAGAGA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTATCAGTACTTAGACAAAAGATCAGTGTATACAGGAGAAAGAGA  544

seq1  TGCATGCAGGGAGAACCTGTCAGGAAGAGATGCTGTCAGGGGGAGAAGCT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCAGGGAGAACCTGTCAGGAAGAGATGCTGTCAGGGGGAGAAGCT  594

seq1  TTCAGGGTGAGAGGCTCTCAGGAAAGAAAAGGCTCTGTGAGGAGGAGATG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGTGAGAGGCTCTCAGGAAAGAAAAGGCTCTGTGAGGAGGAGATG  644

seq1  GGCCCTCAGGTGGTGGGGGAGCTCTCAGCTGGGCATAGGTATCAAGTGAG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTCAGGTGGTGGGGGAGCTCTCAGCTGGGCATAGGTATCAAGTGAG  694

seq1  AACAGGCTGTCAGATAGGGAAAGGCTGTCAGTCAGGTGGGAGGGGTTGTC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCTGTCAGATAGGGAAAGGCTGTCAGTCAGGTGGGAGGGGTTGTC  744

seq1  AGATTGGGAGTAGCTGTCAGGTGCAGGGAGGTTGCCAATCAGGTGTGAAG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGGGAGTAGCTGTCAGGTGCAGGGAGGTTGCCAATCAGGTGTGAAG  794

seq1  AAACTGTCAGTCAGGCAGGGAGAAGCTGTTAGGCAGGGAGAAGCTTTCAG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTCAGTCAGGCAGGGAGAAGCTGTTAGGCAGGGAGAAGCTTTCAG  844

seq1  GTGGGGAGAGGCTGTCAGGGGGGAGAAGCTGTCAGGTGGGGAGAGGCTGT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAGAGGCTGTCAGGGGGGAGAAGCTGTCAGGTGGGGAGAGGCTGT  894

seq1  CAGGTGGGGAGAGGTTGTCAGGTGGGGAGAGGCTGTCAGGTGGGGAGAGG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGGGAGAGGTTGTCAGGTGGGGAGAGGCTGTCAGGTGGGGAGAGG  944

seq1  CTGTCAGGTGGGGAGAGGTTGTCAGGTGGGGAGAGGCTGTCAGGTGGGGA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGGTGGGGAGAGGTTGTCAGGTGGGGAGAGGCTGTCAGGTGGGGA  994

seq1  GAGGTTGTCAGGTGGGGAGAGGCTGTCAGGTGGGGAGAGGCTGTCAGGTG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGTCAGGTGGGGAGAGGCTGTCAGGTGGGGAGAGGCTGTCAGGTG  1044

seq1  GGGAGAAGCTGTCAGGTAGGAGAGGCTGTCAGGTAAAAGAAGCCCCTGGC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAGCTGTCAGGTAGGAGAGGCTGTCAGGTAAAAGAAGCCCCTGGC  1094

seq1  AACATAAACCAAGTAGAAAGAAAAGAATTC  1118
      ||||||||||||||||||||||||||||||
seq2  AACATAAACCAAGTAGAAAGAAAAGAATTC  1124

seq1: chr14_60387204_60388286
seq2: B6Ng01-004O18.g_69_1161

seq1  GAATTCCTTAAAGTCCTTGGAATGCTGTGTCTTTAGAAAGAGTCCCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAAGTCCTTGGAATGCTGTGTCTTTAGAAAGAGTCCCCAGG  50

seq1  TAGCTTCCTTGACTTCACAGATGTTCACTGAGACTTCCTGGGTGGCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCCTTGACTTCACAGATGTTCACTGAGACTTCCTGGGTGGCTGCT  100

seq1  GGGCTTTCCGTGTCACATCACAAGGTGCCACAGGGAAGATGAACCTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTCCGTGTCACATCACAAGGTGCCACAGGGAAGATGAACCTCTGA  150

seq1  CAGTGGAAAAGAGCTTTCATTCTCCACCCTTCCTTCCCTGTGCCCGCGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAAAGAGCTTTCATTCTCCACCCTTCCTTCCCTGTGCCCGCGAG  200

seq1  GGAAGACCTGCCTTCAACCCCGTGAGAAAAACTCCAAATGGAATAGACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACCTGCCTTCAACCCCGTGAGAAAAACTCCAAATGGAATAGACTA  250

seq1  GACAAAGAAATACTTAATCACATTGGTGGGGGAAAATCTCAGTAGAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGAAATACTTAATCACATTGGTGGGGGAAAATCTCAGTAGAAACA  300

seq1  ATGTATCTTTTCAATGACTGAAGATGCTATGAATAGACAGACTGCTTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCTTTTCAATGACTGAAGATGCTATGAATAGACAGACTGCTTGCT  350

seq1  GCTGCATCTGTCTCTGGCTCTGGGTTGGGGTGGGAGAAGGGTAATATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATCTGTCTCTGGCTCTGGGTTGGGGTGGGAGAAGGGTAATATTTG  400

seq1  CCATTATTAGATACTACTTTAATTCTTAAAGCTTCAAAGAATTATGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATTAGATACTACTTTAATTCTTAAAGCTTCAAAGAATTATGTTCA  450

seq1  TTTGCCAAAACCCCACTGTGTAGCCAACTACAAAGAATCATTTATGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAAAACCCCACTGTGTAGCCAACTACAAAGAATCATTTATGAAAA  500

seq1  TCACTGGGAGCATTCTTAATTTTTTTTTTTGAGACAGGGTTTCCCTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGGAGCATTCTTAATTTTTTTTTTTGAGACAGGGTTTCCCTGTGT  550

seq1  AGTCCTGGTTGTCCTGGAATTCACTATGTAGAGCAGGCTAGCCTTGAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGGTTGTCCTGGAATTCACTATGTAGAGCAGGCTAGCCTTGAGCT  600

seq1  CAGAGATCCACGTGCCTCTTGCCCCGGACTGCTGGGATTAAAGGTGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATCCACGTGCCTCTTGCCCCGGACTGCTGGGATTAAAGGTGTGTG  650

seq1  CCTCCACCTCCTGGTGCAGTCTTCAAATATTAATTTCTACAAACATCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACCTCCTGGTGCAGTCTTCAAATATTAATTTCTACAAACATCCTT  700

seq1  TCCCTAGGATGCTCCTTATTCTTAGGCGTAGCTTGGGCATGTTTGCAATA  750
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCCCTAGGATGCTCCTTATTCTTAGGCGTAGCTTGGGCATG-TTGCAATA  749

seq1  GTTCCTCTTGGGAGCCTTCCTCCTCTGGTCAGCCCGAACCCAGCTACTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCTTGGGAGCCTTCCTCCTCTGGTCAGCCCGAACCCAGCTACTGT  799

seq1  CTC-TTTCGACACAG-TTCCTCCCGTGACTGGAGAGAGA-CCTTCTCAAG  847
      ||| ||||||||||| ||||||||||||||||||||||| |||||||| |
seq2  CTCTTTTCGACACAGTTTCCTCCCGTGACTGGAGAGAGACCCTTCTCAGG  849

seq1  CTTCACCTGGGACGTCGGGCTAGCCCCAGGTGCTC-TTTCTACACGTGTG  896
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTTCACCTGGGACGTCGGGCTAGCCCCAGGTGCTCTTTTCTACACGTGTG  899

seq1  ATTGTTCAGCATCATACCCAGTCCTTGACA-CTTCTCGGGGAATCAAGAG  945
      |||  ||||||||||||||||||| ||||| |||||| ||||||||||||
seq2  ATTTGTCAGCATCATACCCAGTCC-TGACACCTTCTC-GGGAATCAAGAG  947

seq1  ACTGCTGAATCAGATAGC-AGGTGAGATGCTGCTTC-AGGCCATGGCATG  993
      |||||||| ||||||||| ||||||||||||||||| | ||| |||||||
seq2  ACTGCTGATTCAGATAGCAAGGTGAGATGCTGCTTCTATGCCTTGGCATG  997

seq1  G-AAGCCATGC-TTTGAACTCTCACACTCTTCCTCAT-GTGGATTCTACC  1040
      | ||||||||| ||||| |||||   ||| |||  || ||||||||||| 
seq2  GAAAGCCATGCTTTTGATCTCTCCTCCTCCTCCCTATGGTGGATTCTACT  1047

seq1  CCAGCAGAAG-ACTATAGATGCT-AAGCAGAT-CATTGATGGAAAC  1083
      |||||  ||| ||||   ||||| |||  ||| |||||||||||||
seq2  CCAGCGAAAGAACTAGGAATGCTGAAGACGATACATTGATGGAAAC  1093