BAC Information

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BAC

Clone NameB6Ng01-005A12
Chromosome14 (Build37)
Map Location 50,455,166 - 50,456,099
singlet/doubletsinglet
Overlap genenone
Upstream geneExoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4, 3632451O06Rik, LOC667006
Downstream geneOlfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005A12.bB6Ng01-005A12.g
ACCDH842282DH842283
length965939
definitionDH842282|Mus musculus domesticus DNA, BAC clone: B6Ng01-005A12, 5' end.DH842283|Mus musculus domesticus DNA, BAC clone: B6Ng01-005A12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaactaggaagttacctattcagtaactaattaacattataaaag
actaagctaacagctcagggctagtctgcaagatgtttactaggatagaa
aggacagaattatccaaatagggttttccatgagaaaatttaggatatcc
cactgagacaggtttcttccttaggccctaagaattcaggcagaattata
gagcataaataaattgtatgcctcaggccagccttttcttttttatatta
acaacagggaggagatgtaaaccccccccctcagtctgaaacctggctga
tcaggttttactgttagcacaaagagaacatggtgggggggtggagcctg
ccaccctatcgttctgccactcccactgctgctacctgctgcctagctgt
tccggagccaaacacatggtcacctgcaactggactccaaggatgatttg
gtgggaatggaccccttcccccttcttcataacccagtgcacctactagt
aaaattgagctttgatcagagcctcgttgtcttagttcctttctttctct
tgtccgtctagttccctttcttacagctcaagtctgccacttcagccata
ccccattcctcaggaggcgctgtatggcgcacaacaaaaatgtgccaaga
ggaactctcaattctgaatatctatgctccaaatgcaagggcagccacat
ttcattaaaaaatctttagtaaagctcaacgcataaattgtacctcacaa
ataatagtgggacatttcaacacaccacttacatcatggacagatcatgg
aaacagaaactaacagggaggcagtgaaactaacagaagttatgaaacaa
tggttctaacagatactaacagaacattttatcctaaaacaaaagatata
tccttcttctcaggacctcatggtaccttcctcaaaggttgaccattata
tgggtcacaaatcat
gaattccataaaaaaggcagaagaaacaggtaaggagctgcccagagtca
gtcatgtgaaacatttgggggatacatattcctattcgggtacttttcct
caggcttagatgaaacccttgcaagggtgtcttcactcctcttatgcact
aatgacagactggagatgtacctttggtgaggttttcctatgagatgaaa
tgtgtaatagtctaaattaaaggttgattttcagtgaccacagatcaaag
atgcttttgtaattaatatgaaaagtaagccccaatctagggagacaaca
gttctgagtttgagcagactcattttcagctctgtcaagatattatttaa
gaacccaatgtggtgatttgatccacataaattccttccctgttcaccta
acaaagtgagtttgtggagataataccagaaaggcctttgagttcctcag
aagaccactgttaagatggtttaacagtcaggccagacagatgatattgg
ctgagaaagggtattgtctagacacattttttttctcttctggccatgta
taacaaggtatttctttattttatcggtgaacatatcacttaatctcatc
aagtgatgttcagacatttgcattgttatctaatactcttgtttactatt
gtacagttttctttatttttttctccctcctcttcctttctccttttttt
tcttcctttcttctttgtttccttctttctttccttccctctttccttcc
ttcctttcctcctttcctgccttaattcctttaagagagagtgttttcac
gtagcctatggtagtttccaattccttatataagtaataatggccttgaa
cttctgaactcctgcctttatcttcaagtgatggcattacaagcttgggg
tactacactaggtttttgtggttggtggtgggtggtgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_50455166_50456099
seq2: B6Ng01-005A12.g_71_1009

seq1  GAATTCCATAAAAAAGGCAGAAGAAACAGGTAAGGAGCTGCCCAGAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAAAAAGGCAGAAGAAACAGGTAAGGAGCTGCCCAGAGTCA  50

seq1  GTCATGTGAAACATTTGGGGGATACATATTCCTATTCGGGTACTTTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTGAAACATTTGGGGGATACATATTCCTATTCGGGTACTTTTCCT  100

seq1  CAGGCTTAGATGAAACCCTTGCAAGGGTGTCTTCACTCCTCTTATGCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTAGATGAAACCCTTGCAAGGGTGTCTTCACTCCTCTTATGCACT  150

seq1  AATGACAGACTGGAGATGTACCTTTGGTGAGGTTTTCCTATGAGATGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAGACTGGAGATGTACCTTTGGTGAGGTTTTCCTATGAGATGAAA  200

seq1  TGTGTAATAGTCTAAATTAAAGGTTGATTTTCAGTGACCACAGATCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAATAGTCTAAATTAAAGGTTGATTTTCAGTGACCACAGATCAAAG  250

seq1  ATGCTTTTGTAATTAATATGAAAAGTAAGCCCCAATCTAGGGAGACAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTTGTAATTAATATGAAAAGTAAGCCCCAATCTAGGGAGACAACA  300

seq1  GTTCTGAGTTTGAGCAGACTCATTTTCAGCTCTGTCAAGATATTATTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAGTTTGAGCAGACTCATTTTCAGCTCTGTCAAGATATTATTTAA  350

seq1  GAACCCAATGTGGTGATTTGATCCACATAAATTCCTTCCCTGTTCACCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAATGTGGTGATTTGATCCACATAAATTCCTTCCCTGTTCACCTA  400

seq1  ACAAAGTGAGTTTGTGGAGATAATACCAGAAAGGCCTTTGAGTTCCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTGAGTTTGTGGAGATAATACCAGAAAGGCCTTTGAGTTCCTCAG  450

seq1  AAGACCACTGTTAAGATGGTTTAACAGTCAGGCCAGACAGATGATATTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCACTGTTAAGATGGTTTAACAGTCAGGCCAGACAGATGATATTGG  500

seq1  CTGAGAAAGGGTATTGTCTAGACACATTTTTTTTCTCTTCTGGCCATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAAGGGTATTGTCTAGACACATTTTTTTTCTCTTCTGGCCATGTA  550

seq1  TAACAAGGTATTTCTTTATTTTATCGGTGAACATATCACTTAATCTCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGGTATTTCTTTATTTTATCGGTGAACATATCACTTAATCTCATC  600

seq1  AAGTGATGTTCAGACATTTGCATTGTTATCTAATACTCTTGTTTACTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATGTTCAGACATTTGCATTGTTATCTAATACTCTTGTTTACTATT  650

seq1  GTACAGTTTTCTTTA-TTTTTTCTCCCTCCTCTTCCTTTCTCCTTTTTTT  699
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTACAGTTTTCTTTATTTTTTTCTCCCTCCTCTTCCTTTCTCCTTTTTTT  700

seq1  TCTTCCTTTCTTCTTTGTTTCCTTCTTTCTTTCCTTCCCTCTTTCCTTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTTCTTCTTTGTTTCCTTCTTTCTTTCCTTCCCTCTTTCCTTCC  750

seq1  TTCCTTTCCTCC-TTCCTGCCTTAATTCCTTTAAGAGAGAGTG-TTTCAC  797
      |||||||||||| |||||||||||||||||||||||||||||| ||||||
seq2  TTCCTTTCCTCCTTTCCTGCCTTAATTCCTTTAAGAGAGAGTGTTTTCAC  800

seq1  GTAGCCTATGGTAGTTTCCAATTCCTTATATAAGTAATAATGGCCTTGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTATGGTAGTTTCCAATTCCTTATATAAGTAATAATGGCCTTGAA  850

seq1  CTTCTGAAACTCCTGCCTTTATC-TCAAGTGATGGCATTACAAGCTTGTG  896
      |||||| |||||||||||||||| |||||||||||||||||||||||| |
seq2  CTTCTG-AACTCCTGCCTTTATCTTCAAGTGATGGCATTACAAGCTTGGG  899

seq1  GTACTACACTAGGTTTTTGTGG-TGGTGGT-GGTGGTGCA  934
      |||||||||||||||||||||| ||||||| |||||||||
seq2  GTACTACACTAGGTTTTTGTGGTTGGTGGTGGGTGGTGCA  939