BAC Information

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BAC

Clone NameB6Ng01-005B11
Chromosome14 (Build37)
Map Location 78,343,365 - 78,467,518
singlet/doubletdoublet
Overlap geneEpsti1
Upstream geneLOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678, Gm1587, Dnajc15
Downstream geneAU021034, Tnfsf11, LOC219180, Akap11, Dgkh, LOC673649, 1300010F03Rik, LOC629709
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005B11.bB6Ng01-005B11.g
ACCDH842325DH842326
length1,100142
definitionDH842325|Mus musculus domesticus DNA, BAC clone: B6Ng01-005B11, 5' end.DH842326|Mus musculus domesticus DNA, BAC clone: B6Ng01-005B11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,466,419 - 78,467,518)(78,343,365 - 78,343,506)
sequence
gaattcttgagctctatgttccagccacatacagtttaagtatcaccata
atctggatgccaaagggtctaggggaaaaaagctcaaatacagtgaacaa
cctcagacttctttcgatgtctaaaacatccaaatgtcgctgtgtattat
ggatgcaaagctaaactttacggtcattttcaaatctctctctcaagttc
acccagtcattgacagtttagtacaaagttgtcatctacaatgttctcac
tcaaaaacacacagtcagtttacaaaaaataatcacacacacacacatac
acacacatatgaacatgttttttatttcctccaatttttattaggtattt
acttcatttacatttcaaatgatatcccttataccctctccccactccca
cttcttggccctggcgttcccctgtactggggcataaaaagtttgcaaga
ccaaggggcctctcttccccatgatggccgactaggccatcttctgctaa
aaatgcagctagagacacgagctccgggggtattggttatttcatattgt
tgttccacctatagggttgcagaccccatcagctccttgggtattttctc
tagctcctccattgggggccctgtgatccatccaatagctgactgtgagc
atccacttctgtgttttccaggcactggcttaccctcacaagagacagct
ataacagggtttccttcagcaaatcttgctgacgtatgcaatattgtctt
cgtttggtggctgattatgggatggaccccgggtggtgcagtgtctggat
ggtccattccttcagaacatgttttaagtgaggtgcttgttttgtaaggc
ttcatgaagagtttattctcaatcctcaggcagtcacatttgatcatgca
tgtcagaagctagacatacattggttgaggagctaaagatttgactcccc
tttttctcctccacaaattctcacccaactcagcccaggccttccaatta
gcagccatctcgttggaaacccttcctcctggttattctaaatcaaccat
tactcctagctccattccggttgtaagtgaggaaggacccttcttgtctt

tcgaacctgaaagcagagagtagaaatgggcctttaaccttgacatagta
ctttcaccattacttttagtctctatttactgcctataaaaattcaaatg
tgatttttttttttttggtgtgtgtgtgtgttggggtgggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_78466419_78467518
seq2: B6Ng01-005B11.b_47_1146 (reverse)

seq1  AAGACAGAAAGGGTCCTTCCTCAC-TCCAGCCGGAATGGAGACTAGGAGT  49
      ||||||  |||||||||||||||| | || ||||||||||| ||||||||
seq2  AAGACAAGAAGGGTCCTTCCTCACTTACAACCGGAATGGAG-CTAGGAGT  49

seq1  AATGGGTGGATTTTAGAATAGACAGGGAGGGAGGGTTTTCAAGCGAGATG  99
      ||||| ||   ||||||||| ||  ||||| ||||||| ||| |||||||
seq2  AATGGTTG--ATTTAGAATA-ACCAGGAGGAAGGGTTTCCAA-CGAGATG  95

seq1  GCTGCTAA-TGGAAGGCCTGGGCTGAGTTTGGGTGAGAATTTGTGGGAGG  148
      |||||||| |||||||||||||||||| |||||||||||||||| |||||
seq2  GCTGCTAATTGGAAGGCCTGGGCTGAG-TTGGGTGAGAATTTGT-GGAGG  143

seq1  GAGAAAAGGGGAGTCAGATCTTTAGCTCCTC-ACCAATGTATGTCTAGCC  197
         ||||||||||||| |||||||||||||| ||||||||||||||||| 
seq2  AGAAAAAGGGGAGTCAAATCTTTAGCTCCTCAACCAATGTATGTCTAGCT  193

seq1  TCTGACATGCATG-TCATATGTGACTGCCTG-TGATTGAGAAT-AACTCT  244
      ||||||||||||| ||| |||||||||||||  |||||||||| ||||||
seq2  TCTGACATGCATGATCAAATGTGACTGCCTGAGGATTGAGAATAAACTCT  243

seq1  TCATGAAGCCTAACAAAAC-AGCACCTCACTTAAAACATGTTCTGGAAGG  293
      ||||||||||| ||||||| ||||||||||||||||||||||||| | | 
seq2  TCATGAAGCCTTACAAAACAAGCACCTCACTTAAAACATGTTCTGAAGGA  293

seq1  ATGGACCATCCAGACACTGCACCACCCGGGGTCCATCCCATAATCAGCCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACCATCCAGACACTGCACCACCCGGGGTCCATCCCATAATCAGCCA  343

seq1  CCAAACGAAGACACTATTGCATACGTCAGCAAGATTTTGCTGAAGG-AAC  392
      ||||||||||||| |||||||||||||||||||| ||||||||||| |||
seq2  CCAAACGAAGACAATATTGCATACGTCAGCAAGA-TTTGCTGAAGGAAAC  392

seq1  CCTGTTATAGCTGTCTCTTGTGAGGCTAAGCCAGTGCCTGGAAAACACAG  442
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCTGTTATAGCTGTCTCTTGTGAGGGTAAGCCAGTGCCTGGAAAACACAG  442

seq1  AAGTGGATGCTCACAGTCAGCTATTGGATGGATCACAGGGCCCCCAATGG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGATGCTCACAGTCAGCTATTGGATGGATCACAGGGCCCCCAATGG  492

seq1  AGGAGCTAGAGAAAATACCCAAGGAGCTGATGGGGTCTGCAACCCTATAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTAGAGAAAATACCCAAGGAGCTGATGGGGTCTGCAACCCTATAG  542

seq1  GTGGAACAACAATATGAAATAACCAATACCCCCGGAGCTCGTGTCTCTAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACAACAATATGAAATAACCAATACCCCCGGAGCTCGTGTCTCTAG  592

seq1  CTGCATTTTTAGCAGAAGATGGCCTAGTCGGCCATCATGGGGAAGAGAGG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTTTTAGCAGAAGATGGCCTAGTCGGCCATCATGGGGAAGAGAGG  642

seq1  CCCCTTGGTCTTGCAAACTTTTTATGCCCCAGTACAGGGGAACGCCAGGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGGTCTTGCAAACTTTTTATGCCCCAGTACAGGGGAACGCCAGGG  692

seq1  CCAAGAAGTGGGAGTGGGGAGAGGGTATAAGGGATATCATTTGAAATGTA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAGTGGGAGTGGGGAGAGGGTATAAGGGATATCATTTGAAATGTA  742

seq1  AATGAAGTAAATACCTAATAAAAATTGGAGGAAATAAAAAACATGTTCAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTAAATACCTAATAAAAATTGGAGGAAATAAAAAACATGTTCAT  792

seq1  ATGTGTGTGTATGTGTGTGTGTGTGATTATTTTTTGTAAACTGACTGTGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGTATGTGTGTGTGTGTGATTATTTTTTGTAAACTGACTGTGT  842

seq1  GTTTTTGAGTGAGAACATTGTAGATGACAACTTTGTACTAAACTGTCAAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGAGTGAGAACATTGTAGATGACAACTTTGTACTAAACTGTCAAT  892

seq1  GACTGGGTGAACTTGAGAGAGAGATTTGAAAATGACCGTAAAGTTTAGCT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGTGAACTTGAGAGAGAGATTTGAAAATGACCGTAAAGTTTAGCT  942

seq1  TTGCATCCATAATACACAGCGACATTTGGATGTTTTAGACATCGAAAGAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATCCATAATACACAGCGACATTTGGATGTTTTAGACATCGAAAGAA  992

seq1  GTCTGAGGTTGTTCACTGTATTTGAGCTTTTTTCCCCTAGACCCTTTGGC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGGTTGTTCACTGTATTTGAGCTTTTTTCCCCTAGACCCTTTGGC  1042

seq1  ATCCAGATTATGGTGATACTTAAACTGTATGTGGCTGGAACATAGAGCTC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGATTATGGTGATACTTAAACTGTATGTGGCTGGAACATAGAGCTC  1092

seq1  AAGAATTC  1100
      ||||||||
seq2  AAGAATTC  1100

seq1: chr14_78343365_78343506
seq2: B6Ng01-005B11.g_79_220

seq1  TCGAACCTGAAAGCAGAGAGTAGAAATGGGCCTTTAACCTTGACATAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACCTGAAAGCAGAGAGTAGAAATGGGCCTTTAACCTTGACATAGTA  50

seq1  CTTTCACCATTACTTTTAGTCTCTATTTACTGCCTATAAAAATTCAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACCATTACTTTTAGTCTCTATTTACTGCCTATAAAAATTCAAATG  100

seq1  TGATTTTTTTTTTTTTGGTGTGTGTGTGTGTTGGGGTGGGAT  142
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTTTTTTTTGGTGTGTGTGTGTGTTGGGGTGGGAT  142