BAC Information

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BAC

Clone NameB6Ng01-006D22
Chromosome14 (Build37)
Map Location 48,866,808 - 48,956,344
singlet/doubletdoublet
Overlap genePeli2
Upstream geneWdhd1, Socs4, LOC670795, C130032J12Rik, Lgals3, Dlg7, LOC666895, Fbxo34, D14Ertd436e, EG625730, LOC100042787, Ktn1, 4930447J18Rik, Map1lc3-ps2, EG624367
Downstream geneLOC100041831, 6720456H20Rik, 4930572G02Rik, Otx2, LOC100041864, LOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006D22.bB6Ng01-006D22.g
ACCDH843160DH843161
length1,125975
definitionDH843160|Mus musculus domesticus DNA, BAC clone: B6Ng01-006D22, 5' end.DH843161|Mus musculus domesticus DNA, BAC clone: B6Ng01-006D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,955,216 - 48,956,344)(48,866,808 - 48,867,781)
sequence
gaattccattcataagaggtatagagcgtactcagaacacagtacatgct
ggcacgggcctgcctgcttctcgaagcccaagcatatcagctcagatcag
ggcagatgacttcaggatctgcactgtttttgatggctcaggaagggacc
gtgattttgctctttttgtcttggagaactgtatgctgggacttcctggt
ttctatgtgttcaggtttgtggaatcctcactaggaaaagctaaattagt
taattgaaaaatgaaaaataggaaaattaaaccagcaagtcctccaaaca
tattggaccaatttaggagccaggttaacattgatttattgttttaataa
ggttcctgtgtaaggagaaatgactggactgtaacataaataagcatgga
tggcatttatttggctataatatatgggaacaacaggggaagggactctt
tgagctttgggttttttccttatctttaaagcctttgggccttcaatgtt
attttcaacaaaaacctatatccaaagaaaaatgtgatcctcagagtacc
aaaaatgacccacaaagctattttagagctcagatgaaagtaagacacac
attggtcctctgctctcaaaccaggacagtgacatggctaaaaaaagtgt
ctgaggttcacgaaaggccatgtatatggacagagggcgtgcattagtca
gggctctctagagtagcagaacttagagatttattagaatcatttacaag
ctaccgttcaattaatccaacaatggcaggctatggatgggaagtccaag
aatctagtagctattcaggccacaagactggatgtctcagctggtcttca
gtgtacacactgcagtcctgaagaatggggctctaacaccagtgagggaa
tggacttgctagcaaggtgagtgcaagcagagaaagagcagaatctttct
ccttccatgttcttacatgacttccagcataaagtgtggcccacattaaa
aggtaagtctggctatctcagatccagatcaaaggggtgagtctttctta
ccttaaaggtcaggctagacatggattcacttcttcaacagcaaaaatta
tctttcacaggggtgacctcatgtt
gaattcagagacatcttggcttgggtaccactcaactgtcagatgaaatt
tagaggcttctcagcttgtctacacaactgcctgtaagagaagggggaag
ctgatccaacagaagaaatgacggacggcaggtttcccataccaaccagg
cgttcagtaagaaagtggctgaaatttctttgctggcaaaagcaatatga
ggcttgtgtcttaaaggagaaaaatcacactagtaccccagggataaggt
gcagtcggaggagaggcgataaatcataacctggccagccagataagagc
aggcttaaaatcagcttaaagtaaccgatcctagcaggatctttcggtgg
aaatagaatttcgggtctttgaagtcagtttaagttgaatcatgagacat
gaatttagtgactaggggagaaactcacaatgttgctctcctggagggaa
gtaatggctgtggacataaagggccggggctgagaagtgggcctcagtcc
cacatcccttgcctacccgtttaagatcagtgtgtggcattttagatgtg
cagtagcgtttagcttacaaatgagtgtgtaaagtcccgcctctccaaga
ctggtggacatgaggacccagagtgtatgaagtccccctctcttctttga
gactgatagacatgaggacccaggcttcgggttttgtgacgtggccagga
aaagagtagggcttctcatattatttcacctctagacatctttatgacta
aaagttcgggatgaggtatgatgctgagtttgaagaaatcgtattctctc
cttttttatgttctatatttgtttaatatttgaaacatttgttgaccttt
tcttttaaaaataaaacttaaagaaaaggtgaagaagaaaagaaagtaga
gcttgcctccacaagacctacacaaggccaactagtcagtcattcgtgcg
tgggtgttgggagtggttcacgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_48955216_48956344
seq2: B6Ng01-006D22.b_46_1170 (reverse)

seq1  AACATGGAGGTCACACCTGTG-AAGATAATTTTTGCTTGGTTTGAAGAAG  49
      ||||| |||||||| |||||| |||||||||||||||    |||||||| 
seq2  AACAT-GAGGTCACCCCTGTGAAAGATAATTTTTGCT---GTTGAAGAA-  45

seq1  GTGAATCCATGTCTAGCCTGGACTTTTAAGGT-AGGAAGACTCACACCTT  98
      ||||||||||||||||||| ||| |||||||| || ||||||||| ||||
seq2  GTGAATCCATGTCTAGCCT-GACCTTTAAGGTAAGAAAGACTCACCCCTT  94

seq1  TGATCTGGATCTTGAGATAGCCAGACTTACC-TTTAATGTGGGCCACACT  147
      ||||||||||| ||||||||||||||||||| ||||||||||||||||||
seq2  TGATCTGGATC-TGAGATAGCCAGACTTACCTTTTAATGTGGGCCACACT  143

seq1  TTATGCTGGAAGTCATGTAAGAACATGGAAGGAGAAAGATTCTGCTCTTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTGGAAGTCATGTAAGAACATGGAAGGAGAAAGATTCTGCTCTTT  193

seq1  CTCTGCTTGCACTCACCTTGCTAGCAAGTCCATTCCCTCACTGGTGTTAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTTGCACTCACCTTGCTAGCAAGTCCATTCCCTCACTGGTGTTAG  243

seq1  AGCCCCCTTCTTCAGGACTGCAGTGTGTACACTGAAGACCAGCTGAGACA  297
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCATTCTTCAGGACTGCAGTGTGTACACTGAAGACCAGCTGAGACA  293

seq1  TCCAGTCTTGTGGCCTGAATAGCTACTAGATTCTTGGACTTCCCATCCAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCTTGTGGCCTGAATAGCTACTAGATTCTTGGACTTCCCATCCAT  343

seq1  AGCCTGCCATTGTTGGATTAATTGAACGGTAGCTTGTAAATGATTCTAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCCATTGTTGGATTAATTGAACGGTAGCTTGTAAATGATTCTAAT  393

seq1  AAATCTCTAAGTTCTGCTACTCTAGAGAGCCCTGACTAATGCACGCCCTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTAAGTTCTGCTACTCTAGAGAGCCCTGACTAATGCACGCCCTC  443

seq1  TGTCCATATACATGGCCTTTCGTGAACCTCAGACACTTTTTTTAGCCATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATATACATGGCCTTTCGTGAACCTCAGACACTTTTTTTAGCCATG  493

seq1  TCACTGTCCTGGTTTGAGAGCAGAGGACCAATGTGTGTCTTACTTTCATC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTCCTGGTTTGAGAGCAGAGGACCAATGTGTGTCTTACTTTCATC  543

seq1  TGAGCTCTAAAATAGCTTTGTGGGTCATTTTTGGTACTCTGAGGATCACA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCTAAAATAGCTTTGTGGGTCATTTTTGGTACTCTGAGGATCACA  593

seq1  TTTTTCTTTGGATATAGGTTTTTGTTGAAAATAACATTGAAGGCCCAAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTGGATATAGGTTTTTGTTGAAAATAACATTGAAGGCCCAAAG  643

seq1  GCTTTAAAGATAAGGAAAAAACCCAAAGCTCAAAGAGTCCCTTCCCCTGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAAGATAAGGAAAAAACCCAAAGCTCAAAGAGTCCCTTCCCCTGT  693

seq1  TGTTCCCATATATTATAGCCAAATAAATGCCATCCATGCTTATTTATGTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCATATATTATAGCCAAATAAATGCCATCCATGCTTATTTATGTT  743

seq1  ACAGTCCAGTCATTTCTCCTTACACAGGAACCTTATTAAAACAATAAATC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCAGTCATTTCTCCTTACACAGGAACCTTATTAAAACAATAAATC  793

seq1  AATGTTAACCTGGCTCCTAAATTGGTCCAATATGTTTGGAGGACTTGCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAACCTGGCTCCTAAATTGGTCCAATATGTTTGGAGGACTTGCTG  843

seq1  GTTTAATTTTCCTATTTTTCATTTTTCAATTAACTAATTTAGCTTTTCCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATTTTCCTATTTTTCATTTTTCAATTAACTAATTTAGCTTTTCCT  893

seq1  AGTGAGGATTCCACAAACCTGAACACATAGAAACCAGGAAGTCCCAGCAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGATTCCACAAACCTGAACACATAGAAACCAGGAAGTCCCAGCAT  943

seq1  ACAGTTCTCCAAGACAAAAAGAGCAAAATCACGGTCCCTTCCTGAGCCAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCTCCAAGACAAAAAGAGCAAAATCACGGTCCCTTCCTGAGCCAT  993

seq1  CAAAAACAGTGCAGATCCTGAAGTCATCTGCCCTGATCTGAGCTGATATG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAGTGCAGATCCTGAAGTCATCTGCCCTGATCTGAGCTGATATG  1043

seq1  CTTGGGCTTCGAGAAGCAGGCAGGCCCGTGCCAGCATGTACTGTGTTCTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCTTCGAGAAGCAGGCAGGCCCGTGCCAGCATGTACTGTGTTCTG  1093

seq1  AGTACGCTCTATACCTCTTATGAATGGAATTC  1129
      ||||||||||||||||||||||||||||||||
seq2  AGTACGCTCTATACCTCTTATGAATGGAATTC  1125

seq1: chr14_48866808_48867781
seq2: B6Ng01-006D22.g_69_1043

seq1  GAATTCAGAGACATCTTGGCTTGGGTACCACTCAACTGTCAGATGAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGACATCTTGGCTTGGGTACCACTCAACTGTCAGATGAAATT  50

seq1  TAGAGGCTTCTCAGCTTGTCTACACAACTGCCTGTAAGAGAAGGGGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCTTCTCAGCTTGTCTACACAACTGCCTGTAAGAGAAGGGGGAAG  100

seq1  CTGATCCAACAGAAGAAATGACGGACGGCAGGTTTCCCATACCAACCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCCAACAGAAGAAATGACGGACGGCAGGTTTCCCATACCAACCAGG  150

seq1  CGTTCAGTAAGAAAGTGGCTGAAATTTCTTTGCTGGCAAAAGCAATATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCAGTAAGAAAGTGGCTGAAATTTCTTTGCTGGCAAAAGCAATATGA  200

seq1  GGCTTGTGTCTTAAAGGAGAAAAATCACACTAGTACCCCAGGGATAAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTGTCTTAAAGGAGAAAAATCACACTAGTACCCCAGGGATAAGGT  250

seq1  GCAGTCGGAGGAGAGGCGATAAATCATAACCTGGCCAGCCAGATAAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCGGAGGAGAGGCGATAAATCATAACCTGGCCAGCCAGATAAGAGC  300

seq1  AGGCTTAAAATCAGCTTAAAGTAACCGATCCTAGCAGGATCTTTCGGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTAAAATCAGCTTAAAGTAACCGATCCTAGCAGGATCTTTCGGTGG  350

seq1  AAATAGAATTTCGGGTCTTTGAAGTCAGTTTAAGTTGAATCATGAGACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAATTTCGGGTCTTTGAAGTCAGTTTAAGTTGAATCATGAGACAT  400

seq1  GAATTTAGTGACTAGGGGAGAAACTCACAATGTTGCTCTCCTGGAGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAGTGACTAGGGGAGAAACTCACAATGTTGCTCTCCTGGAGGGAA  450

seq1  GTAATGGCTGTGGACATAAAGGGCCGGGGCTGAGAAGTGGGCCTCAGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGGCTGTGGACATAAAGGGCCGGGGCTGAGAAGTGGGCCTCAGTCC  500

seq1  CACATCCCTTGCCTACCCGTTTAAGATCAGTGTGTGGCATTTTAGATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCCTTGCCTACCCGTTTAAGATCAGTGTGTGGCATTTTAGATGTG  550

seq1  CAGTAGCGTTTAGCTTACAAATGAGTGTGTAAAGTCCCGCCTCTCCAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGCGTTTAGCTTACAAATGAGTGTGTAAAGTCCCGCCTCTCCAAGA  600

seq1  CTGGTGGACATGAGGACCCAGAGTGTATGAAGTCCCCCTCTCTTCTTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGACATGAGGACCCAGAGTGTATGAAGTCCCCCTCTCTTCTTTGA  650

seq1  GACTGATAGACATGAGGACCCAGGCTTCGGGTTTTGTGACGTGGCCAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGATAGACATGAGGACCCAGGCTTCGGGTTTTGTGACGTGGCCAGGA  700

seq1  AAAGAGTAGGGCTTCTCAT-TTATTTCACCTCTAGACATCTTTATGACTA  749
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAAGAGTAGGGCTTCTCATATTATTTCACCTCTAGACATCTTTATGACTA  750

seq1  AAAGTTCGGGATGAGGTATGATGCTGAGTTTGAAGAAATCGTATTCTCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCGGGATGAGGTATGATGCTGAGTTTGAAGAAATCGTATTCTCTC  800

seq1  C-TTTTTATGTTTCTATATTTGTTTAATATTTGAAACATTTGTTGACCTT  848
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTATG-TTCTATATTTGTTTAATATTTGAAACATTTGTTGACCTT  849

seq1  TCTTTTAAAAAATAAAACTTAAAG-AAAGGTGAAGAAGAAAAGAAAGGTA  897
      |  ||| ||||||||||||||||| ||||||||||||||||||||| |||
seq2  TTCTTTTAAAAATAAAACTTAAAGAAAAGGTGAAGAAGAAAAGAAA-GTA  898

seq1  GAGCTTGCCTCCACAAGACCTACACAAGGTCAAACTAGTCAGTCATTCGT  947
      ||||||||||||||||||||||||||||| | ||||||||||||||||||
seq2  GAGCTTGCCTCCACAAGACCTACACAAGG-CCAACTAGTCAGTCATTCGT  947

seq1  GCGTGGGTG-TGGGAGTGGCTCACGGGG  974
      ||||||||| ||||||||| ||||||||
seq2  GCGTGGGTGTTGGGAGTGGTTCACGGGG  975