BAC Information

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BAC

Clone NameB6Ng01-006F09
Chromosome14 (Build37)
Map Location 7,197,602 - 7,439,055
singlet/doubletdoublet
Overlap geneEG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024
Upstream geneLOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000
Downstream geneLOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006F09.bB6Ng01-006F09.g
ACCDH843226DH843227
length1,1311,062
definitionDH843226|Mus musculus domesticus DNA, BAC clone: B6Ng01-006F09, 5' end.DH843227|Mus musculus domesticus DNA, BAC clone: B6Ng01-006F09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,437,910 - 7,439,055)(7,197,602 - 7,198,695)
sequence
gaattcacactgctgtgcacaaacccacacacagacacagacacccaagt
gaaaaagaaaagtcaaaaagtgtaacaacatgcttgaaaaacagcagttc
gcttctggtctgggatagctcagttggcctagaggaatgaagggctgggt
ttgagtgagccccagtgttcatctgtgatcccagtgctgaggtaaaggca
gcatggtcagaatgatggagatctgtgagttatcatctggctgctaacta
aaagcaagggaggaacttgtagactgctcactcaccccacttaaccctca
ttcaaagtaaatgaaggacaggctacttaggcagcaggtaagaggccact
gaacaaagtatagtcacaaacaaagaggacccaacattccaaggcccctt
taaaggagagattcaggaatgcaaatctagtcagtcaagtcacagaaagt
gagggttggaaaccatccagtggcttagctctctccacaatccttagtga
cctttataggtgtagctccagtggaatattagccttggaagttagtatga
ggtgggagcatgctggatcaagtacgtgttttgaattttcggattcaaaa
cgtgtgaatgcatctgtctaccagactaagggccaggagatgcaggagtc
tgaagtccatgagagaggaaatgacccatgcaaatgcagtcactcctctg
tttgcaactagatggaaactgtctccactgccagtaaagatgatttcagg
aaagatgattgaaaaacttgctagttgcaattttcattttctttttccag
agagcagcaggagagacagttgacatttgagctgtctctgaactgcccct
gtccctaatttgagttgagagctcacagggaaccacagacctgctcctta
gctgggtttcttttcacaaatctttcagccatagaaaatgaataaaagca
ggacttcccagcccgcccagtcagacatcccagctgccagaataggtgct
tgggagctgctcagggtgcaaagcacagccttgctctgtgagccagtact
gtctgggcaatggctccaggctcagctcagaggcgaccgccttgagctac
agcactagcaagaatgcctggaaggaaaggg
gaattcactcggacaaccagatccttctacggcaaagcttttattgcttc
aacataaggaagaccccgaacccagaaaatggtgctgcttatatagcccg
cagcgtgacggttcagcacctgatgtggcgtgacagcacctgattagttg
ctcgcccatcaccccattactacgtcccgagatgggcagtgactgggcgt
gaatttactcttgcacttgcgcataaggcttgtttactagttaggctcag
tggaagccggcgccatcttataatggcgattgctaatggcacggctctcc
acatttccccctttttattttattaaaatttgaggctggtctaggcctct
gcagtcatgtccatctgctgtggttactgtcttaggtcattcctccaatg
tcacagcctttcctgtcataggttaaccctatcaccaccgggtcccatgt
cttaggttggtctgtacatgaggaaagttgcccatctctggataagaagt
tagactcagccgggcatggtggtgcacacttttaatcccagcactggaga
ggcagaggcaggccgatttctgagttggaggccagcctggtctacaaatt
gagttccaggacagccagagctatatagaaaaaccctgtctcgaaaccac
caccaccaccccaaaagaagaagttagactccagaaaaccaaagaacccc
attaaaaaaggggtacagagctaaacaataattctcaactgaggaatact
gaatggctgagacacctaaaaaatgttcaacatccttaatcatcagggaa
atgcaaatcaaaacaaccgtagattccacctcagtcagaatggctaagat
caaatttcagttgacagcagatgctggcaaggttgtgagaagaggaacac
tcctccatgtgtgggattgcagctgtacacactctgaaatcagtttggta
gttctcagaaatgacatagtactaccaaagatcagcatatactctggcat
ataccagaagacgctcactgtacagtcacatgctccactatgttcatagc
agctattttaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7437910_7439055
seq2: B6Ng01-006F09.b_47_1177 (reverse)

seq1  CCCTTTCCTT-CAGGCATTCCTTGCCTCAGGTGCCTGTAGCTCCAGGCGG  49
      |||||||||| |||||||| ||||   |  ||| ||||||||| ||||||
seq2  CCCTTTCCTTCCAGGCATT-CTTG---CTAGTG-CTGTAGCTCAAGGCGG  45

seq1  TCGCCTCCTGAGCTGAGCCTGGAGCCAATTGCCCAGGACAGTACCTGGCT  99
      |||||| ||||||||||||||||||| |||||||| ||||||| ||||||
seq2  TCGCCT-CTGAGCTGAGCCTGGAGCC-ATTGCCCA-GACAGTA-CTGGCT  91

seq1  TCAACAGAGCAAGGCTGTGCTTTGCACCCCTGACCCGCTCCCAAGCACCT  149
         ||||||||||||||||||||||| |||||| | ||||||||||||||
seq2  --CACAGAGCAAGGCTGTGCTTTGCA-CCCTGAGCAGCTCCCAAGCACCT  138

seq1  ATTCTGGCAGCTGGGATGTCTGGCTGGGCTGGCTGGGGAGCCCTGCTTTT  199
      |||||||||||||||||||||| |||||| ||||||| || |||||||||
seq2  ATTCTGGCAGCTGGGATGTCTGACTGGGCGGGCTGGGAAGTCCTGCTTTT  188

seq1  ATTCATTTTCTATGGCTGAAAGATTTTGTGAAAAGAAAACCAGCTAAGGA  249
      ||||||||||||||||||||||| |||||||||||||| |||||||||||
seq2  ATTCATTTTCTATGGCTGAAAGA-TTTGTGAAAAGAAACCCAGCTAAGGA  237

seq1  GCAGGTCTGTGGTTCCCTGTGAGCTCTCAACTCAAATTAGGGACAGGGGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCTGTGGTTCCCTGTGAGCTCTCAACTCAAATTAGGGACAGGGGC  287

seq1  AGTTCAGAGACACAGCTCAAATGTCAACTGTCTCTCCTGCTGCTCTCTGG  349
      |||||||||  ||||||||||||||||||||||||||||||||||||| |
seq2  AGTTCAGAG--ACAGCTCAAATGTCAACTGTCTCTCCTGCTGCTCTCT-G  334

seq1  GAAAAAGAAAATGAAAATTGCAACTAGGAAGTTTTTCAATCATCTTTCCT  399
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAAAAAGAAAATGAAAATTGCAACTAGCAAGTTTTTCAATCATCTTTCCT  384

seq1  GAAATCATCTTTACTGGCAGTGGAGACAGTTTCCATCTAGTTGCAAACAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCATCTTTACTGGCAGTGGAGACAGTTTCCATCTAGTTGCAAACAG  434

seq1  AGGAGTGACTGCATTTGCATGGGTCATTTCCTCTCTCATGGACTTCAGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGACTGCATTTGCATGGGTCATTTCCTCTCTCATGGACTTCAGAC  484

seq1  TCCTGCATCTCCTGGCCCTTAGTCTGGTAGACAGATGCATTCACACGTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCATCTCCTGGCCCTTAGTCTGGTAGACAGATGCATTCACACGTTT  534

seq1  TGAAACCGAAAATTCAAAACACGTACTTGATCCAGCATGCTCCCACGTCA  599
      |||| ||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGAATCCGAAAATTCAAAACACGTACTTGATCCAGCATGCTCCCACCTCA  584

seq1  TACTAACTTCCAAGGCTAATATTCCACTGGAGCTACACCTATAAAGGTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACTTCCAAGGCTAATATTCCACTGGAGCTACACCTATAAAGGTCA  634

seq1  CTAAGGATTGTGGAGAGAGCTAAGCCACTGGATGGTTTCCAACCCTCACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGATTGTGGAGAGAGCTAAGCCACTGGATGGTTTCCAACCCTCACT  684

seq1  TTCTGTGACTTGACTGACTAGATTTGCATTCCTGAATCTCTCCTTTAAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGACTTGACTGACTAGATTTGCATTCCTGAATCTCTCCTTTAAAG  734

seq1  GGGCCTTGGAATGTTGGGTCTTCTTTGTTTGTGACTATGCTTTGTTCAGT  799
      |||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  GGGCCTTGGAATGTTGGGTCCTCTTTGTTTGTGACTATACTTTGTTCAGT  784

seq1  GGCCTCTTACCTGCTGCCTAAGTAGCCTGTCCTTCATTTACTTTGAATGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTTACCTGCTGCCTAAGTAGCCTGTCCTTCATTTACTTTGAATGA  834

seq1  GGGTTAAGTGGGGTGAGTGAGCAGTCTACAAGTTCCTCCCTTGCTTTTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAAGTGGGGTGAGTGAGCAGTCTACAAGTTCCTCCCTTGCTTTTAG  884

seq1  TTAGCAGCCAGATGATAACTCACAGATCTCCATCATTCTGACCATGCTGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGCCAGATGATAACTCACAGATCTCCATCATTCTGACCATGCTGC  934

seq1  CTTTACCTCAGCACTGGGATCACAGATGAACACTGGGGCTCACTCAAACC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCTCAGCACTGGGATCACAGATGAACACTGGGGCTCACTCAAACC  984

seq1  CAGCCCTTCATTCCTCTAGGCCAACTGAGCTATCCCAGACCAGAAGCGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTTCATTCCTCTAGGCCAACTGAGCTATCCCAGACCAGAAGCGAA  1034

seq1  CTGCTGTTTTTCAAGCATGTTGTTACATTTTTTGACTTTTCTTTTTCACT  1099
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTGCTGTTTTTCAAGCATGTTGTTACACTTTTTGACTTTTCTTTTTCACT  1084

seq1  TGGGTGTCTGTGTCTGTGTGTGGGTTTGTGCACAGCAGTGTGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTCTGTGTCTGTGTGTGGGTTTGTGCACAGCAGTGTGAATTC  1131

seq1: chr14_7197602_7198695
seq2: B6Ng01-006F09.g_66_1127

seq1  GAATTCACTCGGACAACCGGATCCTTCTACGGCAAAGCTTTTATTGCTTC  50
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAATTCACTCGGACAACCAGATCCTTCTACGGCAAAGCTTTTATTGCTTC  50

seq1  CACATAAGGAAGACCCCGAACCCGGAAAATGGTGCTGCTTATATAGCCCG  100
       |||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AACATAAGGAAGACCCCGAACCCAGAAAATGGTGCTGCTTATATAGCCCG  100

seq1  CAGCGTGACGGTTCAGCACCTGATGTGGCGTGACAGCACCTGATTAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTGACGGTTCAGCACCTGATGTGGCGTGACAGCACCTGATTAGTTG  150

seq1  CTCGCCCATCACCCCATTACTACGCCCCGAGATGGGCAGTGACTGGGCGT  200
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTCGCCCATCACCCCATTACTACGTCCCGAGATGGGCAGTGACTGGGCGT  200

seq1  GAATTTACTCTTGCACTTGCGCATAAGGCTTGTTTACTAGTTAGGCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTACTCTTGCACTTGCGCATAAGGCTTGTTTACTAGTTAGGCTCAG  250

seq1  TGGAAGCCGGCGCCATCTTATAATGGCGATTGCTAATGGCACGGCTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCCGGCGCCATCTTATAATGGCGATTGCTAATGGCACGGCTCTCC  300

seq1  ACATTTCCTCCTTTTTATTTTATTAAAATTTGAGGCTGGTCTAGGCCTCT  350
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCCCCTTTTTATTTTATTAAAATTTGAGGCTGGTCTAGGCCTCT  350

seq1  GCAGTCATGTCCATCTGCTGTGGTTACTGTCTTAGGTCATTCCTCCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCATGTCCATCTGCTGTGGTTACTGTCTTAGGTCATTCCTCCAATG  400

seq1  TCACAGCCTTTCCTGTCATAGGTTAACCCTATCACCACCGGGTCCCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCCTTTCCTGTCATAGGTTAACCCTATCACCACCGGGTCCCATGT  450

seq1  CTTAGGTTGGTCTGTACATGAGGAAAGTTGCCCATCTCTGGATAAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTTGGTCTGTACATGAGGAAAGTTGCCCATCTCTGGATAAGAAGT  500

seq1  TAGACTCAGCCGGGCATGGTGGTGCACACTTTTAATCCCAGCACTGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCAGCCGGGCATGGTGGTGCACACTTTTAATCCCAGCACTGGAGA  550

seq1  GGCAGAGGCAGGCCGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCAGGCCGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAAATT  600

seq1  GAGTTCCAGGACAGCCAGAGGTATATAGAAAAACCCTGTCTCGAAACCAC  650
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAGTTCCAGGACAGCCAGAGCTATATAGAAAAACCCTGTCTCGAAACCAC  650

seq1  AACCACCACCCCAAAAGAAGAAGTTAGACTCCAGAAAACCAAAGAACCCC  700
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACCCCAAAAGAAGAAGTTAGACTCCAGAAAACCAAAGAACCCC  700

seq1  ATTAAAAATGGGGTACAGAGCTAAACAATAATTCTCAACTGAGGAATACT  750
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAAGGGGTACAGAGCTAAACAATAATTCTCAACTGAGGAATACT  750

seq1  GAATGGCTGAGACACCTAAAAAATGTTCAACATCCTTAATCATCAGGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCTGAGACACCTAAAAAATGTTCAACATCCTTAATCATCAGGGAA  800

seq1  ATGCAAATCAAAACAACCGTAGATTCCACCTCAGGTCAGAATGGCTAAGA  850
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATGCAAATCAAAACAACCGTAGATTCCACCTCA-GTCAGAATGGCTAAGA  849

seq1  TCAAAATTTCAGTTGACAGCAGATGCTGGCAAGGTTGTGGAGAAAGAGGA  900
      || ||||||||||||||||||||||||||||||||||| ||| |||||||
seq2  TC-AAATTTCAGTTGACAGCAGATGCTGGCAAGGTTGT-GAG-AAGAGGA  896

seq1  ACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA  950
      ||||||||||| |||  |||||||||| ||| ||||||  |||||| |||
seq2  ACACTCCTCCA-TGT--GTGGGATTGC-AGC-TGTACA--CACTCT-GAA  938

seq1  ATCAGTTTGGTAGTTCCTCAGAAAATTGGACATAGTACTACCAGAGGATC  1000
      ||||||||||||||| ||||||||    ||||||||||||||| | ||| 
seq2  ATCAGTTTGGTAGTT-CTCAGAAA---TGACATAGTACTACCA-AAGAT-  982

seq1  CAGCAATATTACTCCTGGGCATATACCCAGAAGACGCTCCAACTTGTAAC  1050
      |||| ||| |||||   |||||||| |||||||||||||  || ||| ||
seq2  CAGC-ATA-TACTC--TGGCATATA-CCAGAAGACGCTC--AC-TGT-AC  1023

seq1  AAGGTCACATGCTCCACTATGTTCATAGCAGCCTTATTTATAAT  1094
      |  |||||||||||||||||||||||||||||  ||||| ||||
seq2  A--GTCACATGCTCCACTATGTTCATAGCAGC--TATTT-TAAT  1062