BAC Information

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BAC

Clone NameB6Ng01-006L22
Chromosome14 (Build37)
Map Location 122,374,052 - 122,374,543
singlet/doubletsinglet
Overlap genePhgdhl1
Upstream geneFarp1, LOC100043837, Stk24, Slc15a1, LOC100043577, Dock9, LOC668843, Gpr18, Ebi2
Downstream geneTimm8a2, Tm9sf2, LOC621710, Clybl, 1700108J01Rik, EG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847, Pcca, BC006662, 4930594M22Rik, Tmtc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006L22.bB6Ng01-006L22.g
ACCDH843522DH843523
length1,241487
definitionDH843522|Mus musculus domesticus DNA, BAC clone: B6Ng01-006L22, 5' end.DH843523|Mus musculus domesticus DNA, BAC clone: B6Ng01-006L22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcatcaatattcagtaagaagctattataatgatattgttgtc
ccagtccctaaagttggggtggatagttttggtcattttataaattatag
atatgttgtcattttaagggatgatttacaaatagttatagtcttggaca
aggaggaaactagagagcttagactaaggaatttctatcttttctctttc
ttatcttcctttctttcttccttcctttctttcttaagtaaaggaaaggg
gaaatatagtaatattataagaaattagacaaatagggatagattattaa
atctactttaaaaaaaactttttctaagatttatttattattatatgtaa
gtacatggtagctgtcttcagacacaccagaagagggcgtcagatttcat
tacggatggttgtgagccacaatgtggttcctgggaattgtagtcaggac
ctttggaagagcagtcagtgctcttaaccactaagtcatctttccagccc
ctgttaagtttactattaaacaaaagcactttatagccacaatcttacat
tggtagagatcttcatattctgatgcagaactgaagttatattttcttta
aattagtacagaattttgtatattgatacaggtttaaggttttcattggc
actaatctttgtatattgatacaaagtttaagattaattttgttacataa
tatatgtatgtttcaactcttaggcactatgcctatgaaactcataaaat
cacaaggtttagtcccagtccttttaatagctgctattacaaactgtcta
agataattaaataatgcaagtcagcagtcagtcagtcattgtatttatcc
accggttcctatttgtagcccaaatgaactcgggagaagtcaatttgttt
ttagtgtatcacacacacacacacatacacacacacagtctctgagcatt
acatggtcccaaagcccctgaaatcaaggcactcctttcatctgaaattc
tgtagtacggctgactgtagcttacaggaagaagaaaaggacctgcacgg
gagactctttgtaggggtattagaaatggcttccaaattgagactgagct
ctatgatctgggggatacaaaacagagtttgtctaggtagcctctatggg
agccgatgcaagtattataggttcggacattttcactgacttctaagacg
accaggtccttgaacctatcactcgaggttacttggaattc
tgtgtgcgatctcactccctctccctcctcccctctcccccctcctgtct
cccctctcccctcttccctctggtgctggtgttacattcatacatcacta
tgttgaccttttctgtgtgctgtgggttctggactcaggacttcatgctt
ccatggcaggccgtcatgctttcatgcactgagccgtctatgcctgccca
cccccaccctggttctttcatacatatttctctggctttctctctcccca
ctgtggacagttgaaaccaggaatattagataggcggatggatggtgggt
gggcaactaactttaatcgttgtaagagccaaaatgcgtgtttggagaca
catgtgcatgtcattgcaggatgacttacagactaagtgtgaggtgaaca
cttgcccgcacagaggcatactcatacccttccagagtgctagtagaaac
ttggaactaagatgaacatcagaaacctaagaaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_122374052_122374543
seq2: B6Ng01-006L22.g_68_559

seq1  GAATTCTGTGTGCGATCTCACTCCCTCTCCCTCCTCCCCTCTCCCCCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTGCGATCTCACTCCCTCTCCCTCCTCCCCTCTCCCCCCTC  50

seq1  CTGTCTCCCCTCTCCCCTCTTCCCTCTGGTGCTGGTGTTACATTCATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCCCCTCTCCCCTCTTCCCTCTGGTGCTGGTGTTACATTCATACA  100

seq1  TCACTATGTTGACCTTTTCTGTGTGCTGTGGGTTCTGGACTCAGGACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATGTTGACCTTTTCTGTGTGCTGTGGGTTCTGGACTCAGGACTTC  150

seq1  ATGCTTCCATGGCAGGCCGTCATGCTTTCATGCACTGAGCCGTCTATGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCCATGGCAGGCCGTCATGCTTTCATGCACTGAGCCGTCTATGCC  200

seq1  TGCCCACCCCCACCCTGGTTCTTTCATACATATTTCTCTGGCTTTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACCCCCACCCTGGTTCTTTCATACATATTTCTCTGGCTTTCTCTC  250

seq1  TCCCCACTGTGGACAGTTGAAACCAGGAATATTAGATAGGCGGATGGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACTGTGGACAGTTGAAACCAGGAATATTAGATAGGCGGATGGATG  300

seq1  GTGGGTGGGCAACTAACTTTAATCGTTGTAAGAGCCAGAATGCGTGTTTG  350
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTGGGTGGGCAACTAACTTTAATCGTTGTAAGAGCCAAAATGCGTGTTTG  350

seq1  GAGACACATGTGCAGGTCATTGGAGGATGACTTACAGAGTAAGTGTGAGG  400
      |||||||||||||| ||||||| ||||||||||||||| |||||||||||
seq2  GAGACACATGTGCATGTCATTGCAGGATGACTTACAGACTAAGTGTGAGG  400

seq1  TGAACACTTGCCCGCACAGAGGCATACTCATACCCTTCCAGAGTGCAAGC  450
      |||||||||||||||||||||||||||||||||||||||||||||| || 
seq2  TGAACACTTGCCCGCACAGAGGCATACTCATACCCTTCCAGAGTGCTAGT  450

seq1  AGAAACTTGGAACTAAGATGAGCATCAGAAACCAAAGAAATT  492
      ||||||||||||||||||||| ||||||||||| ||||||||
seq2  AGAAACTTGGAACTAAGATGAACATCAGAAACCTAAGAAATT  492