BAC Information

Click to search

BAC

Clone NameB6Ng01-006M08
Chromosome14 (Build37)
Map Location 22,282,346 - 22,451,828
singlet/doubletdoublet
Overlap geneMyst4
Upstream geneAnxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk
Downstream geneEG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075, EG435392
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006M08.bB6Ng01-006M08.g
ACCDH843538DH843539
length1,2131,062
definitionDH843538|Mus musculus domesticus DNA, BAC clone: B6Ng01-006M08, 5' end.DH843539|Mus musculus domesticus DNA, BAC clone: B6Ng01-006M08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,450,594 - 22,451,828)(22,282,346 - 22,283,396)
sequence
gaattccacttgcccttcaagctcactagaaagagcaggaaggtgcttaa
aaaacaccacagcagtaggtacctgaccagtctagagagggaaagccctg
cctgagaagcctcttagacacatgggaaactgatgaccctcccttattat
aatggagggacactggaggccagagcaaacggcagctgtgcagcagaatg
atacacagcaacatgagcactggaaagagaaaggacactggttttcagaa
aaagaagacatcatgtctgccgtaggaggaaggcttgatctgagaccctg
aagagtaaacaacacaccaggatggtaacaaagaggccaatacagcaaag
cacagaaatgtgcagctacagtgaggaggattaatgccgagaacggacag
tgaccctctgaacagacaggaccaccaaaggagagcctggagtcctcagt
atacagctgatcagctaagctagatccccgagcctggcagcagaagcctg
gctaaacaatgaaaataaagcagagactttctgctactacgtctgctctg
aaaacacaaaatatcttcaagaaacctacaatgagacccaggaacacagg
gcttcctgggaacggcaaggttctctagggtagctgtccacagagactgg
ggaagagtcccaacatctgctgggatctcgcccagaggatttatccaccc
tggcaagaactggacagaagcacaggtgtttgtgtgctaagcagatacgt
acagctgctcaattccctggaagagggagtacctgccagacactggctgg
agctgctaaacaaagctaattcctcctgccaaagaatgtggaatttacaa
agagccaaggagaccactaattcactggtgcatactgtgctgtagaaagg
gattttaaaaagccccaaaaagttgatgtgatgaagtaagaattcttcat
cagtctaaatggttgcttaatgtagtcagataatatgctaaaccatgcgc
tatctaagagcagtgtgaattccgatgctagattgatacctcactggtgc
tatctataccacaaaccatccagcacacagtcacagtaggaatatttaag
gttcaaagaacagttttgttatacttgcctactggaatctgaaggccttc
cttctgtaattctatggcgagaagaaccattccacctcttggatggtctt
accaaaatatttt
gaattcctgacactgtagaaaaaaattagttagttaacttagtttactta
gttgtataaagccccactgctagctataacaggaagatgtgccagaatgg
aggctgaggctggaaatgggatcgtagagtgaccactatggttgtgactg
agctctacaaagctgggagggaggacctagacttgatttgcacagctcta
agtgctgtgtggtcctaggaagcatgcaggaatccatcaaatttaaggct
tgcgtcggggttacataacttcaaagcctaagaaatgtagtatccaaaca
agtgaccgacattaagaggcttctgtgtggggttagcaggatccctgggt
gttcattcccttttttgggttatgaagtcattggtgcagcaactataaat
agagctcatggcagtggtattggctatgacttacaggaccattctagtgg
ggagttcactgctagtcgtatctgtagatttcagtgttgtaaatatacca
gggatggctggtttcaaactacccagaatgtaggctgaatgcaaccctgg
gaaaaccctgtccaacagccggtgtggtcggtccgcgtgctctgctctgc
tctgcactctgggttttctgtgcttgttttgcagctggtgatggagccta
ggcttatacatgctgggtgagcactgtaccagctgagctacatggctagc
cctaagcttttccattttttttttgtctgttatattgtctatgctgatgt
ttgcttatgtgctgtctacgtgcatgtgaccagcagtccacaccaggcat
cttctgtactctccacctattttttctgtcgtttactttttttggtttat
taatcttgtgcatctgtctttatcctcttggtgctcacttgcatgccata
acatgcagtggacatcagaagacatcttcctatgatcttcccatcctacc
atgcaggacctggggaacctttagggtcttcacagcgagcactttttacc
cacttgagtcttctcccaaatgaccaaggctacttaaaatataaagacta
tcagggcttgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22450594_22451828
seq2: B6Ng01-006M08.b_48_1260 (reverse)

seq1  AAAATATTTTGCTAAGACACTCAAAGAAGTGTGGATGGTTTCATCCTCCG  50
      ||||||||||| ||||||  || |||| ||| | |||||    || ||  
seq2  AAAATATTTTGGTAAGACCATCCAAGAGGTG-GAATGGT----TCTTCTC  45

seq1  GCCAATGAGATTTACCGAAGGAAAGACCTTTCAGTATTCGAGGTAAGCAA  100
      ||||   ||| |||| ||||||| |  | ||||| |||| | ||| ||||
seq2  GCCA--TAGAATTACAGAAGGAAGG--CCTTCAG-ATTCCA-GTAGGCAA  89

seq1  GTATAAACAAAAACATGGTCTTTTTGAACCCT-AATATTCCTAACTGTTG  149
      |||| |||||||   || ||  |||||||| | ||||||||| |||| ||
seq2  GTAT-AACAAAA--CTGTTC--TTTGAACCTTAAATATTCCT-ACTG-TG  132

seq1  ACTGTGTGCTTGGATGGTTTGT-GTATAGATAGCA-CAGTGTGTATTCAA  197
      ||||||||| |||||||||||| |||||||||||| ||||| |   ||||
seq2  ACTGTGTGC-TGGATGGTTTGTGGTATAGATAGCACCAGTGAGGTATCAA  181

seq1  TCTTAGCATCGGAATTCACACTGCTCTTTAAGATAGCGCCATGGTTTAGC  247
      || |||||||||||||||||||||||||  |||||||| |||||||||||
seq2  TC-TAGCATCGGAATTCACACTGCTCTT--AGATAGCG-CATGGTTTAGC  227

seq1  ATATTTATCTGACTACATTAAGCAACCATTTAGACTGATGAAGAATTCTT  297
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATA-TTATCTGACTACATTAAGCAACCATTTAGACTGATGAAGAATTCTT  276

seq1  ACTTCATCACATCAACTTTTTTGGGGCTTTTTAAAATCCCTTTCTACAGC  347
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACTTCATCACATCAAC-TTTTTGGGGCTTTTTAAAATCCCTTTCTACAGC  325

seq1  ACAGTATGCACCAGTGAATTAGTGGTCTCCTTGGCTCTTTGTAAATTCCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATGCACCAGTGAATTAGTGGTCTCCTTGGCTCTTTGTAAATTCCA  375

seq1  CATTCTTTGGCAGGAGGAATTAGCTTTGTTTAGCAGCTCCAGCCAGTGTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTGGCAGGAGGAATTAGCTTTGTTTAGCAGCTCCAGCCAGTGTC  425

seq1  TGGCAGGTACTCCCTCTTCCAGGGAATTGAGCAGCTGTACGTATCTGCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGTACTCCCTCTTCCAGGGAATTGAGCAGCTGTACGTATCTGCTT  475

seq1  AGCACACAAACACCTGTGCTTCTGTCCAGTTCTTGCCAGGGTGGATAAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACAAACACCTGTGCTTCTGTCCAGTTCTTGCCAGGGTGGATAAAT  525

seq1  CCTCTGGGCGAGATCCCAGCAGATGTTGGGACTCTTCCCCAGTCTCTGTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGGCGAGATCCCAGCAGATGTTGGGACTCTTCCCCAGTCTCTGTG  575

seq1  GACAGCTACCCTAGAGAACCTTGCCGTTCCCAGGAAGCCCTGTGTTCCTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTACCCTAGAGAACCTTGCCGTTCCCAGGAAGCCCTGTGTTCCTG  625

seq1  GGTCTCATTGTAGGTTTCTTGAAGATATTTTGTGTTTTCAGAGCAGACGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCATTGTAGGTTTCTTGAAGATATTTTGTGTTTTCAGAGCAGACGT  675

seq1  AGTAGCAGAAAGTCTCTGCTTTATTTTCATTGTTTAGCCAGGCTTCTGCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCAGAAAGTCTCTGCTTTATTTTCATTGTTTAGCCAGGCTTCTGCT  725

seq1  GCCAGGCTCGGGGATCTAGCTTAGCTGATCAGCTGTATACTGAGGACTCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCTCGGGGATCTAGCTTAGCTGATCAGCTGTATACTGAGGACTCC  775

seq1  AGGCTCTCCTTTGGTGGTCCTGTCTGTTCAGAGGGTCACTGTCCGTTCTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTCCTTTGGTGGTCCTGTCTGTTCAGAGGGTCACTGTCCGTTCTC  825

seq1  GGCATTAATCCTCCTCACTGTAGCTGCACATTTCTGTGCTTTGCTGTATT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTAATCCTCCTCACTGTAGCTGCACATTTCTGTGCTTTGCTGTATT  875

seq1  GGCCTCTTTGTTACCATCCTGGTGTGTTGTTTACTCTTCAGGGTCTCAGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTTTGTTACCATCCTGGTGTGTTGTTTACTCTTCAGGGTCTCAGA  925

seq1  TCAAGCCTTCCTCCTACGGCAGACATGATGTCTTCTTTTTCTGAAAACCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCTTCCTCCTACGGCAGACATGATGTCTTCTTTTTCTGAAAACCA  975

seq1  GTGTCCTTTCTCTTTCCAGTGCTCATGTTGCTGTGTATCATTCTGCTGCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTTTCTCTTTCCAGTGCTCATGTTGCTGTGTATCATTCTGCTGCA  1025

seq1  CAGCTGCCGTTTGCTCTGGCCTCCAGTGTCCCTCCATTATAATAAGGGAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCCGTTTGCTCTGGCCTCCAGTGTCCCTCCATTATAATAAGGGAG  1075

seq1  GGTCATCAGTTTCCCATGTGTCTAAGAGGCTTCTCAGGCAGGGCTTTCCC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCAGTTTCCCATGTGTCTAAGAGGCTTCTCAGGCAGGGCTTTCCC  1125

seq1  TCTCTAGACTGGTCAGGTACCTACTGCTGTGGTGTTTTTTAAGCACCTTC  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGACTGGTCAGGTACCTACTGCTGTGGTGTTTTTTAAGCACCTTC  1175

seq1  CTGCTCTTTCTAGTGAGCTTGAAGGGCAAGTGGAATTC  1235
      ||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTTCTAGTGAGCTTGAAGGGCAAGTGGAATTC  1213

seq1: chr14_22282346_22283396
seq2: B6Ng01-006M08.g_69_1130

seq1  GAATTCCTGACACTGTAGAAAAAAATTAGTTAGTTAACTTAGTTTACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACACTGTAGAAAAAAATTAGTTAGTTAACTTAGTTTACTTA  50

seq1  GTTGTATAAAGCCCCACTGCTAGCTATAACAGGAAGATGTGCCAGAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATAAAGCCCCACTGCTAGCTATAACAGGAAGATGTGCCAGAATGG  100

seq1  AGGCTGAGGCTGGAAATGGGATCGTAGAGTGACCACTATGGTTGTGACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAGGCTGGAAATGGGATCGTAGAGTGACCACTATGGTTGTGACTG  150

seq1  AGCTCTACAAAGCTGGGAGGGAGGACCTAGACTTGATTTGCACAGCTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTACAAAGCTGGGAGGGAGGACCTAGACTTGATTTGCACAGCTCTA  200

seq1  AGTGCTGTGTGGTCCTAGGAAGCATGCAGGAATCCATCAAATTTAAGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGTGTGGTCCTAGGAAGCATGCAGGAATCCATCAAATTTAAGGCT  250

seq1  TGCGTCGGGGTTACATAACTTCAAAGCCTAAGAAATGTAGTATCCAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTCGGGGTTACATAACTTCAAAGCCTAAGAAATGTAGTATCCAAACA  300

seq1  AGTGACCGACATTAAGAGGCTTCTGTGTGGGGTTAGCAGGATCCCTGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCGACATTAAGAGGCTTCTGTGTGGGGTTAGCAGGATCCCTGGGT  350

seq1  GTTCATTCCCTTTTTTGGGTTATGAAGTCATTGGTGCAGCAACTATAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTCCCTTTTTTGGGTTATGAAGTCATTGGTGCAGCAACTATAAAT  400

seq1  AGAGCTCATGGCAGTGGTATTGGCTATGACTTACAGGACCATTCTAGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCATGGCAGTGGTATTGGCTATGACTTACAGGACCATTCTAGTGG  450

seq1  GGAGTTCACTGCTAGTCGTATCTGTAGATTTCAGTGTTGTAAATATACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCACTGCTAGTCGTATCTGTAGATTTCAGTGTTGTAAATATACCA  500

seq1  GGGATGGCTGGTTTCAAACTACCCAGAATGTAGGCTGAATGCAACCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGCTGGTTTCAAACTACCCAGAATGTAGGCTGAATGCAACCCTGG  550

seq1  GAAAACCCTGTCCAACAGCCGGTGTGGTCGGTCCGCGTGCTCTGCTCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCCTGTCCAACAGCCGGTGTGGTCGGTCCGCGTGCTCTGCTCTGC  600

seq1  TCTGCACTCTGGGTTTTCTGTGCTTGTTTTGCAGCTGGTGATGGAGCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACTCTGGGTTTTCTGTGCTTGTTTTGCAGCTGGTGATGGAGCCTA  650

seq1  GGCTTATACATGCTGGGTGAGCACTGTACCAGCTGAGCTACATGGCTAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATACATGCTGGGTGAGCACTGTACCAGCTGAGCTACATGGCTAGC  700

seq1  CCTAAGC-TTTCCA--TTTTTTTTGTCTGTTATATTGTCTATGCTGATGT  747
      ||||||| ||||||  ||||||||||||||||||||||||||||||||||
seq2  CCTAAGCTTTTCCATTTTTTTTTTGTCTGTTATATTGTCTATGCTGATGT  750

seq1  TTGCTTATGTGCTGTCTACGTGCATGTGACCAGCAGTCAACACCAGGCAT  797
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTGCTTATGTGCTGTCTACGTGCATGTGACCAGCAGTCCACACCAGGCAT  800

seq1  CTTCTGTACTCTCCACCTA-TTTTTCTGTCGTTTACTTTTTTTGGTTTAT  846
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTCTGTACTCTCCACCTATTTTTTCTGTCGTTTACTTTTTTTGGTTTAT  850

seq1  TAATCTTGTGCATCTGTCTTTATCCCCTT-GTGCTCACATGCATGCCATA  895
      ||||||||||||||||||||||||| ||| |||||||| |||||||||||
seq2  TAATCTTGTGCATCTGTCTTTATCCTCTTGGTGCTCACTTGCATGCCATA  900

seq1  ACATGCAGTGGACATCAGAAGACATCTTCC-ATGATC-TCCCATCCTACC  943
      |||||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  ACATGCAGTGGACATCAGAAGACATCTTCCTATGATCTTCCCATCCTACC  950

seq1  ATGCAGGACCTGGGGACCCTT--AGGTCTTCACAGCAAGCAC-TTTTACC  990
      |||||||||||||||| ||||   |||||||||||| ||||| |||||||
seq2  ATGCAGGACCTGGGGAACCTTTAGGGTCTTCACAGCGAGCACTTTTTACC  1000

seq1  CAC-TGAGTCTTCTCACAAATGACCAAGGCAACTTAAAGAATAAAGACTA  1039
      ||| ||||||||||| |||||||||||||| |||||||  ||||||||||
seq2  CACTTGAGTCTTCTCCCAAATGACCAAGGCTACTTAAAATATAAAGACTA  1050

seq1  TCAGGGCTTGCA  1051
      ||||||||||||
seq2  TCAGGGCTTGCA  1062