BAC Information

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BAC

Clone NameB6Ng01-006N10
Chromosome14 (Build37)
Map Location 87,887,724 - 87,888,716
singlet/doubletsinglet
Overlap geneTdrd3
Upstream geneLOC100043311, Diap3, EG665324
Downstream geneLOC100043317, LOC100043780, LOC668624, LOC668625, Pcdh20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006N10.bB6Ng01-006N10.g
ACCDH843582DH843583
length9931,159
definitionDH843582|Mus musculus domesticus DNA, BAC clone: B6Ng01-006N10, 5' end.DH843583|Mus musculus domesticus DNA, BAC clone: B6Ng01-006N10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaccctcaatcccactaaaaagaaatgaaatcacagtcatgatt
taggcgacaccttaggatgcaaatgcaggagttagagaggaacggatcaa
gaggtgtgactaggcccttggggctgcaaggcttaggatcctgagaagtc
agtcaggaaacagtgagacgggaagatgcagcagactcccctgctgaccc
tgtggaagcatctttacactgtccacgtggcaacatgaagactgtttgca
ggagctgatagcagccccggcaataagaagcaaaactaaaccaaccacca
cacagcacatcagtccggcacatgtgaggagctgacttcacagcctacag
cccaggagcctgtgagaggaacaccgacaccagctcagctcacaaactca
atggaacccttggctgcagactgtccagccatttgatgcacagtaataga
aacaaaggtgccagtcttctatcagtaaacactgctctcctgagttatcc
tctacaaactatttcaaacactcatttttttcaaatattttcaaaatgcc
ttttctataatttatatattataatatatataaaatctatacatctaaac
tatatatgtaaaagtaagtatatatttgcatatatagtttgtatatataa
aatttatatatataatgtaaaatccaatgataaactccagttttcatgaa
atatagaccaattttgtatcaaaagcgtttgcaaccaaagagtatacttg
gagggacccatggctccagctggatatgtagcagaagatggcttcattgg
gcatcaatgggaaaagaggcccttggtcctgtgaaggcttgatgccccac
tgtaggggaatgctagggcggggaggcaggagtggggtgggtggagaaac
acccttcatagaagcaggggtagcggagatgggataggggatttctagga
ttggtggaacaggaaatgaaataactttgaatgtaattataaa
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactccggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccgtatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggctcagcaaac
acagaaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagagaaagtagccaaggagctaaaggatctgcactcta
taggtggacaacattatgagctacagtacccggagctcttgactctagct
gcatatatatcaagatggctagtggcatcctgaagagaggccattggaac
tggcaactttaatgcctcagtacagggaactccaggtctaaaaagggaaa
tggtgggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_87887724_87888716
seq2: B6Ng01-006N10.b_45_1037 (reverse)

seq1  TTTAT--TTACATTTCAAATGTTATTTCCTTTCCTGTTTCCACCCAATCC  48
      |||||  ||||| |||||| |||||||| ||||||| ||||| |||||||
seq2  TTTATAATTACA-TTCAAA-GTTATTTCATTTCCTG-TTCCA-CCAATCC  46

seq1  TGGAAATCCCCTATCCCATCTCCGCTACCCCTGCTTCTATG-AGGGTGTT  97
      | ||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAGAAATCCCCTATCCCATCTCCGCTACCCCTGCTTCTATGAAGGGTGTT  96

seq1  TCTCCACCCA-CCCACTCCTGCCTCCCCGCCCTAGCATTCCCCTACAGTG  146
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACCCACCCCACTCCTGCCTCCCCGCCCTAGCATTCCCCTACAGTG  146

seq1  GGGCATCAAGCCTTCACAGGACCAAGGGCCTCTTTTCCCATTGATGCCCA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCAAGCCTTCACAGGACCAAGGGCCTCTTTTCCCATTGATGCCCA  196

seq1  ATGAAGCCATCTTCTGCTACATATCCAGCTGGAGCCATGGGTCCCTCCAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCCATCTTCTGCTACATATCCAGCTGGAGCCATGGGTCCCTCCAA  246

seq1  GTATACTCTTTGGTTGCAAACGCTTTTGATACAAAATTGGTCTATATTTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTCTTTGGTTGCAAACGCTTTTGATACAAAATTGGTCTATATTTC  296

seq1  ATGAAAACTGGAGTTTATCATTGGATTTTACATTATATATATAAATTTTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACTGGAGTTTATCATTGGATTTTACATTATATATATAAATTTTA  346

seq1  TATATACAAACTATATATGCAAATATATACTTACTTTTACATATATAGTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACAAACTATATATGCAAATATATACTTACTTTTACATATATAGTT  396

seq1  TAGATGTATAGATTTTATATATATTATAATATATAAATTATAGAAAAGGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTATAGATTTTATATATATTATAATATATAAATTATAGAAAAGGC  446

seq1  ATTTTGAAAATATTTGAAAAAAATGAGTGTTTGAAATAGTTTGTAGAGGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAAAATATTTGAAAAAAATGAGTGTTTGAAATAGTTTGTAGAGGA  496

seq1  TAACTCAGGAGAGCAGTGTTTACTGATAGAAGACTGGCACCTTTGTTTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCAGGAGAGCAGTGTTTACTGATAGAAGACTGGCACCTTTGTTTCT  546

seq1  ATTACTGTGCATCAAATGGCTGGACAGTCTGCAGCCAAGGGTTCCATTGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGTGCATCAAATGGCTGGACAGTCTGCAGCCAAGGGTTCCATTGA  596

seq1  GTTTGTGAGCTGAGCTGGTGTCGGTGTTCCTCTCACAGGCTCCTGGGCTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGAGCTGAGCTGGTGTCGGTGTTCCTCTCACAGGCTCCTGGGCTG  646

seq1  TAGGCTGTGAAGTCAGCTCCTCACATGTGCCGGACTGATGTGCTGTGTGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTGTGAAGTCAGCTCCTCACATGTGCCGGACTGATGTGCTGTGTGG  696

seq1  TGGTTGGTTTAGTTTTGCTTCTTATTGCCGGGGCTGCTATCAGCTCCTGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGTTTAGTTTTGCTTCTTATTGCCGGGGCTGCTATCAGCTCCTGC  746

seq1  AAACAGTCTTCATGTTGCCACGTGGACAGTGTAAAGATGCTTCCACAGGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTCTTCATGTTGCCACGTGGACAGTGTAAAGATGCTTCCACAGGG  796

seq1  TCAGCAGGGGAGTCTGCTGCATCTTCCCGTCTCACTGTTTCCTGACTGAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGGGGAGTCTGCTGCATCTTCCCGTCTCACTGTTTCCTGACTGAC  846

seq1  TTCTCAGGATCCTAAGCCTTGCAGCCCCAAGGGCCTAGTCACACCTCTTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGGATCCTAAGCCTTGCAGCCCCAAGGGCCTAGTCACACCTCTTG  896

seq1  ATCCGTTCCTCTCTAACTCCTGCATTTGCATCCTAAGGTGTCGCCTAAAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGTTCCTCTCTAACTCCTGCATTTGCATCCTAAGGTGTCGCCTAAAT  946

seq1  CATGACTGTGATTTCATTTCTTTTTAGTGGGATTGAGGGTAGAATTC  993
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTGTGATTTCATTTCTTTTTAGTGGGATTGAGGGTAGAATTC  993