BAC Information

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BAC

Clone NameB6Ng01-007I18
Chromosome14 (Build37)
Map Location 45,186,666 - 45,187,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402, BC061237, LOC434476
Downstream geneEG666707, LOC100042570, LOC666723, LOC673290, EG666725, EG624966, EG666744, Ptgdr, Ptger2, LOC100041591, 5730420B22Rik, LOC100041611, 6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1, Plekhc1, EG382884
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007I18.bB6Ng01-007I18.g
ACCDH844081DH844082
length1,2351,037
definitionDH844081|Mus musculus domesticus DNA, BAC clone: B6Ng01-007I18, 5' end.DH844082|Mus musculus domesticus DNA, BAC clone: B6Ng01-007I18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagacactacaatttgaggagtatggaatattacacataagtga
gctcaaaaaatcgcaggagagaactcctacagctgataaacgactttagc
aaagtcaatggatacaaaattaacttgaacaatccaggaactttcctcta
ctcaaaggataattatactgaggaagagattttttaaaactacatacttc
acaatagtcacaaacaatatcttggtgtgactcgaacaaagcaatggaat
gatctgaatgacaagaacattaagtctctgaacaaagaaatcgaagaaga
ccttagaagatggaaagatctcccatggtcattgatgagcaggattaata
tagtaaaaaaggtccatcttgccaaaagcaatctacggattcaatgcaat
ccccatcacaaattccaactcattccttcacagagatagaaaaagcaatt
ctcaaatttatctgaaataacataaaccccagtatagcaaaaactattaa
taacaataaaagaatggctcaggaaatcaccatccctgatctcaaaatat
accacagggcaatagtgataaaaatgtcatgtttctggtatagagagaca
agtagaccaacagaatagaattgaagacctagaaatgaacctacattgat
atggtcacttgatctttgtcaaaggtgccaaaaccatccagtggataaaa
gacagcattttcaacaactggtgcttgttcaactggcagtctgcatatag
aagaatgcaaattgatgtattcttatctccttgtacaaagctgtagtcca
agtcactcaaggacctccacataaaacaagatacattgaatctaatacaa
gagagagcagtaaagaacctctaacacattgtcacagggaattgttcctg
tacaggacaccaatgactcatgctgtaggaccaaaaacactgtcaaatgg
gaccccataaaattgaaaagctttgtaagtcaaagatgctgtcaaagaca
aaattgccccacacatatagggaacttctgttacaacctacatctgataa
ggctaatattcaaaatataaaagactcagagtaccctccagagatcctaa
taaccttattaagatgggtacaaagcttaaacagaaattctcccactgag
gaatctcatgctggaaggtactagaggtcacactctttagctctaagaat
gccaatcaaagtgaccttagtcccacctccacgga
gaattcattcactggtttttaagcttttcccatgttattttatttctgga
ttatcaaatagactctgtttctttgttttctggaaatcatgtgcagattt
tgaaatgataatcccactcaatcttatataaaagcactaagattagtggt
cctaaatatacttaagttgttgctcaacatcctgtaggaagaaaaaacac
aaaattaagtacatataatgggggacaatttactccaaaagagagagcag
agtttgtagagaacagcaaatagccaataaggctcagaaaccagtggggc
tctgcagtctggaaatgggacaacaatgtatggttcggtgccattcctga
cagaccaggtcagaattcatcctcatccttagggaataagccacctctag
atgaaaattaaaattgtttccttcaactaccttcccagcacacaaagaaa
cctatcttgatttatacaatgacacacaggttaggaagattagccaagat
cttctcaagtctcataatctctggataatttagaagttcagtttatttat
tatttttaaaatatttttattaaattattttctttatttacatttcaaat
gttttcccatttcctggtttctcatatgaaaaatccctatcccctaccca
cttcccctgctcactgaccaatctactccagctccctggtcctggcattc
ccctacattagggtattgagccttcacaggattaaggtcatcttctctca
ttgatgaccaacaaagccatcctctgctaaatatacagctagagaaatgg
tttccctccatgtgtactcttgggctagtgctttagtctctaggatcaac
tggggtactggttggttcatattgttccttcatatggggcttcaaaccct
ttcagtacctgggtcctttctctatctcctccattgtggttcctgtgatc
agtcccaatgtttggctgaagagcatcctcctcagtatttgacagccact
gacagagtgtctccagagatagctgtaccaggctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_45186666_45187698
seq2: B6Ng01-007I18.g_65_1101 (reverse)

seq1  CAGAGCCTGGTACAGCTATCTCCTGAGACACTCTGTCAGTGCTTGTCAAA  50
      ||||||||||||||||||||||  |||||||||||||||||  |||||||
seq2  CAGAGCCTGGTACAGCTATCTCTGGAGACACTCTGTCAGTGGCTGTCAAA  50

seq1  TACTGAGGAGGATGCTC-TCAGCCAACCATT-GGACTGATCACAGGGACC  98
      ||||||||||||||||| |||||||| |||| |||||||||||||| |||
seq2  TACTGAGGAGGATGCTCTTCAGCCAAACATTGGGACTGATCACAGGAACC  100

seq1  ACAATGGAGGAGATAGAGAAAGGACCCAAGGTACTGAAGGGTTTTGAAGC  148
      ||||||||||||||||||||||||||| |||||||||| || ||||||||
seq2  ACAATGGAGGAGATAGAGAAAGGACCC-AGGTACTGAAAGGGTTTGAAGC  149

seq1  CCCATATG-AGGAACAATATGAACCAACCAGTACCCCAG-TGATCCTAGA  196
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  CCCATATGAAGGAACAATATGAACCAACCAGTACCCCAGTTGATCCTAGA  199

seq1  GACTAAAGCACTAGCCCAAGAGTACACATGGAGGG-AACCATTTCTCTAG  245
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GACTAAAGCACTAGCCCAAGAGTACACATGGAGGGAAACCATTTCTCTAG  249

seq1  CTGTATATTTAGCAGAGGATGGCTTTGTTGGTCATCAATGAGAGAAGATG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATATTTAGCAGAGGATGGCTTTGTTGGTCATCAATGAGAGAAGATG  299

seq1  ACCTTAATCCTGTGAAGGCTCAATACCCTAATGTAGGGGAATGCCAGGAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAATCCTGTGAAGGCTCAATACCCTAATGTAGGGGAATGCCAGGAC  349

seq1  CAGGGAGCTGGAGTAGATTGGTCAGTGAGCAGGGGAAGTGGGTAGGGGAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGCTGGAGTAGATTGGTCAGTGAGCAGGGGAAGTGGGTAGGGGAT  399

seq1  AGGGATTTTTCATATGAGAAACCAGGAAATGGGAAAACATTTGAAATGTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTTTTCATATGAGAAACCAGGAAATGGGAAAACATTTGAAATGTA  449

seq1  AATAAAGAAAATAATTTAATAAAAATATTTTAAAAATAATAAATAAACTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGAAAATAATTTAATAAAAATATTTTAAAAATAATAAATAAACTG  499

seq1  AACTTCTAAATTATCCAGAGATTATGAGACTTGAGAAGATCTTGGCTAAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTAAATTATCCAGAGATTATGAGACTTGAGAAGATCTTGGCTAAT  549

seq1  CTTCCTAACCTGTGTGTCATTGTATAAATCAAGATAGGTTTCTTTGTGTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAACCTGTGTGTCATTGTATAAATCAAGATAGGTTTCTTTGTGTG  599

seq1  CTGGGAAGGTAGTTGAAGGAAACAATTTTAATTTTCATCTAGAGGTGGCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAGGTAGTTGAAGGAAACAATTTTAATTTTCATCTAGAGGTGGCT  649

seq1  TATTCCCTAAGGATGAGGATGAATTCTGACCTGGTCTGTCAGGAATGGCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCTAAGGATGAGGATGAATTCTGACCTGGTCTGTCAGGAATGGCA  699

seq1  CCGAACCATACATTGTTGTCCCATTTCCAGACTGCAGAGCCCCACTGGTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAACCATACATTGTTGTCCCATTTCCAGACTGCAGAGCCCCACTGGTT  749

seq1  TCTGAGCCTTATTGGCTATTTGCTGTTCTCTACAAACTCTGCTCTCTCTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCCTTATTGGCTATTTGCTGTTCTCTACAAACTCTGCTCTCTCTT  799

seq1  TTGGAGTAAATTGTCCCCCATTATATGTACTTAATTTTGTGTTTTTTCTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTAAATTGTCCCCCATTATATGTACTTAATTTTGTGTTTTTTCTT  849

seq1  CCTACAGGATGTTGAGCAACAACTTAAGTATATTTAGGACCACTAATCTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGGATGTTGAGCAACAACTTAAGTATATTTAGGACCACTAATCTT  899

seq1  AGTGCTTTTATATAAGATTGAGTGGGATTATCATTTCAAAATCTGCACAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTTTATATAAGATTGAGTGGGATTATCATTTCAAAATCTGCACAT  949

seq1  GATTTCCAGAAAACAAAGAAACAGAGTCTATTTGATAATCCAGAAATAAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCAGAAAACAAAGAAACAGAGTCTATTTGATAATCCAGAAATAAA  999

seq1  ATAACATGGGAAAAGCTTAAAAACCAGTGAATGAATTC  1033
      ||||||||||||||||||||||||||||||||||||||
seq2  ATAACATGGGAAAAGCTTAAAAACCAGTGAATGAATTC  1037