BAC Information

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BAC

Clone NameB6Ng01-008F24
Chromosome14 (Build37)
Map Location 7,422,271 - 7,423,396
singlet/doubletsinglet
Overlap geneLOC100042024
Upstream geneLOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906
Downstream geneLOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008F24.bB6Ng01-008F24.g
ACCDH844653DH844654
length1,1421,120
definitionDH844653|Mus musculus domesticus DNA, BAC clone: B6Ng01-008F24, 5' end.DH844654|Mus musculus domesticus DNA, BAC clone: B6Ng01-008F24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctatgtggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaggcttgtacaaccactctggaaatcagtctggcagttcctcag
aaaattggacatagtactaccggatgatccagcaatacctctcctgggca
tatatccagaatatgccccaactggtaagaaggacacatgctccactatg
ttcatagcaatagccagaagctggaaagaacccagatgcccctcaacaga
ggaatggatacagaaaatgtggtacatctacacaatggagtactactcag
ctattaaaaagaatgaatttatgaaattcctagccaaatggatggacctg
gagggcatcatcctgagtgaggtaacacattcacaaaggaactcacacag
tatgtactcactgataagtggatattagcccaaaacctaggatacccaag
atataagatacaatttcctaaacacatgaaactcaagaaaaatgaagact
gaagtgtggacactatgcccctccttagaagtgggaacaaaacacccttg
gaaggagttacagagacaaagtttggagctgagatgaaagaatggaccat
gtagagactgccatatccagggatccaccccataatcagcatccaaacgc
tgacaccattgcatacactagcaagattttattgaaaggacccagatgta
gctgtctcttgtgagactatgccggggtcctagcaaacacagaagtggat
gctctcagtcagctaatggatggatcatagggctcccaatggagtagcta
gagaaagtacccaaggagctaaagggatctgcaactctatagtggaacaa
catatgaactaacagtaccctcggagctctgactctagagcattgtgatc
gaagatgtctagacggcctctctggaagagagcccatggaaccccaaatt
ttatgctcagtacatgggacagcccaggcaaaatgtgagtgt
gaattctccagctttggaaggagaggttgccaaaggggatcccacgggtc
catgagaggctccaggagaggcaccccagaaaaggaccaagctggacaga
actagttaacaggtaggtcatggcagttgctagtgacatcatcagtaatg
ccttccttggagaatctcttgtatctaggatagaactagaattctctgtg
ttgtcacctgtgttgtggtgacagcaagtgcctgtggttcatcccttctg
tttgctctgggttcaccagcaggaatgttttcctggctgctcaggctatt
tcagaaagagaatggcgatgaaggagagaccagaccaacagagaaggaag
agggaatcctttctcatgaaaaaggaagaaggaaatcattctggagaagg
cacagtgagtcctgggcagagttggggaacttcctggtagaggtaggctt
gagctgggccttccaggagtaggtcttacaagctgaagccttggactttg
tcaacgtcagaaaaagagtcaagaatttctgatgattagtttgacagagc
caggaattgacaaacctgcagctacttttctgggagctatttaatttcat
tttgagtggcaaaaaatgtcaggagtgggcactatgagaataacagtgtg
tcctttcatggaagggagttgaagcacttcatcttccagattactgtagg
taacttgagtctctgatgaaaagaacagagaaggatgctcccctggtcat
gtcatgtggtgaggactcagacactttggatttgaagacacacgattaat
tagtgcttgatagtgctaagcactatgaacttcagcatttccctgcgtcc
catctgatatgacctgacaatgttccccatatctttatgtctgaggcagc
ttatacattttcaaggcaaccgggcctgtaacaggagtgtggcatatgtc
tgacaatgtggttaggaagaggacatagcttagcaaacagctggaagata
gcttttctgcttcttttagattcactgtcctttacttttctcctccttca
tcttcttttgggacttcgaatggtcttcccttgccctggcaatcaagttg
caaattccttttgtgtttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7422271_7423396
seq2: B6Ng01-008F24.g_66_1185 (reverse)

seq1  GTAAACACAAAA-GAATTTGCATACTTGATGGCCCAGGGGCAGGGGAGAC  49
      |||||||||||| ||||||||| ||||||| | ||||||  |||| ||||
seq2  GTAAACACAAAAGGAATTTGCA-ACTTGATTG-CCAGGGCAAGGGAAGAC  48

seq1  CATTCTGAGTCCCAAGAAGAAGATGGAGGGAGAGAAAAGATAAAGACAGT  99
      |||||  |||||||| ||||||||| |||  ||||||||  || ||||||
seq2  CATTCGAAGTCCCAA-AAGAAGATGAAGGAGGAGAAAAGTAAAGGACAGT  97

seq1  GAATTCCTAAAAG-AGCAGAAAAGCTATCTTCCAGCTGGTTTGCTAAGCT  148
      ||||  ||||||| ||||||||||||||||||||||| ||||||||||||
seq2  GAAT--CTAAAAGAAGCAGAAAAGCTATCTTCCAGCT-GTTTGCTAAGCT  144

seq1  ATGTTCCTCTTCCTAACCACCATTGTCAGACATATGCCACACTCCCTGTT  198
      ||| ||||||||||||||| ||||||||||||||||||||||| ||||||
seq2  ATG-TCCTCTTCCTAACCA-CATTGTCAGACATATGCCACACT-CCTGTT  191

seq1  ACAGGCCCGGTTGCCTTG-AAATGTATAAGCTGCCTCAGACATAAAGATA  247
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACAGGCCCGGTTGCCTTGAAAATGTATAAGCTGCCTCAGACATAAAGATA  241

seq1  TGGGGAACATTGTCAGGTCATATCAGATGGGACGCAGGGAAATCCTGAAG  297
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGGGGAACATTGTCAGGTCATATCAGATGGGACGCAGGGAAATGCTGAAG  291

seq1  TTCATAGTGCTTAGCACTATCAAGCACTAATTAATCGTGTGTCTTCAAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGTGCTTAGCACTATCAAGCACTAATTAATCGTGTGTCTTCAAAT  341

seq1  CCAAAGTGTCTGAGTCCTCACCACATGACATGACCAGGGGAGCATCCTTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTGTCTGAGTCCTCACCACATGACATGACCAGGGGAGCATCCTTC  391

seq1  TCTGTTCTTTTCATCAGAGACTCAAGTTACCTACAGTAATCTGGAAGATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTTTTCATCAGAGACTCAAGTTACCTACAGTAATCTGGAAGATG  441

seq1  AAGTGCTTCAACTCCCTTCCATGAAAGGACACACTGTTATTCTCATAGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTTCAACTCCCTTCCATGAAAGGACACACTGTTATTCTCATAGTG  491

seq1  CCCACTCCTGACATTTTTTGCCACTCAAAATGAAATTAAATAGCTCCCAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCTGACATTTTTTGCCACTCAAAATGAAATTAAATAGCTCCCAG  541

seq1  AAAAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGTCAAACTAATCATCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGTCAAACTAATCATCA  591

seq1  GAAATTCTTGACTCTTTTTCTGATGTTGACAAAGTCCAAGGCTTCAGCTT  647
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAAATTCTTGACTCTTTTTCTGACGTTGACAAAGTCCAAGGCTTCAGCTT  641

seq1  GTAAGACCTACTCCTGGAAGGCCCAGCTCAAGCCTACCTCTACCAGGAAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGACCTACTCCTGGAAGGCCCAGCTCAAGCCTACCTCTACCAGGAAG  691

seq1  TTCCCCAACTCTGCCCAGGACTCACTGTGCCTTCTCCAGAATGATTTCCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAACTCTGCCCAGGACTCACTGTGCCTTCTCCAGAATGATTTCCT  741

seq1  TCTTCCTTTTTCATGAGAAAGGATTCCCTCTTCCTTCTCTGTTGGTCTGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTTTTCATGAGAAAGGATTCCCTCTTCCTTCTCTGTTGGTCTGG  791

seq1  TCTCTCCTTCATCGCCATTCTCTTTCTGAAATAGCCTGAGCAGCCAGGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTTCATCGCCATTCTCTTTCTGAAATAGCCTGAGCAGCCAGGAA  841

seq1  AACATTCCTGCTGGTGATCTCAGAGCAAACAGAAGTGATGAACCACAGGC  897
      ||||||||||||||||| | ||||||||||||||| ||||||||||||||
seq2  AACATTCCTGCTGGTGAACCCAGAGCAAACAGAAGGGATGAACCACAGGC  891

seq1  AGTTGCTGTCACCACAACACAGGTGACAACACAGAAGATTCTAGTTCTAT  947
      | |||||||||||||||||||||||||||||||||  |||||||||||||
seq2  ACTTGCTGTCACCACAACACAGGTGACAACACAGAGAATTCTAGTTCTAT  941

seq1  CCTAGATACAAGAGATTCTCCAAGGAAGGCATTACTGATGATGTCACTAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATACAAGAGATTCTCCAAGGAAGGCATTACTGATGATGTCACTAG  991

seq1  CAACTGCCATGACCTACCTGTTAACTAGTTCTGCCCAGCTTGGTCCTTTT  1047
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAACTGCCATGACCTACCTGTTAACTAGTTCTGTCCAGCTTGGTCCTTTT  1041

seq1  CTGGGGTGCCTCTCCTGGAGCCTCTCATGGACCCGTGGGATCCCCTTTGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTGCCTCTCCTGGAGCCTCTCATGGACCCGTGGGATCCCCTTTGG  1091

seq1  CAACCTCTCCTTCCAAAGCTGGAGAATTC  1126
      |||||||||||||||||||||||||||||
seq2  CAACCTCTCCTTCCAAAGCTGGAGAATTC  1120