BAC Information

Click to search

BAC

Clone NameB6Ng01-008G11
Chromosome14 (Build37)
Map Location 119,790,024 - 119,790,649
singlet/doubletsinglet
Overlap geneHs6st3
Upstream geneAbcc4, Cldn10, Dzip1, Dnajc3a, LOC100043828, Ugcgl2, LOC619601
Downstream geneEG621324, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831, Mbnl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008G11.bB6Ng01-008G11.g
ACCDH844672DH844673
length962623
definitionDH844672|Mus musculus domesticus DNA, BAC clone: B6Ng01-008G11, 5' end.DH844673|Mus musculus domesticus DNA, BAC clone: B6Ng01-008G11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatcatgacctgaccggaaaactctctttaagctagatagcttt
catagccctagaagctgctatataaactgctagagtagtaaggatattca
atggtcccatccctgcatgctacaatagtgacttaacaagcaacatgtgt
gttctggtgcaatagtagtaagactgtttatgggatatccaactaccatc
ttagatggatttgagaccccctccacagaagggaattcatggcggctact
ggaaacatggttaaaacccatggctgatgatactgaaggccctcagggaa
aagccctttgatgttgctttgctaaagagtcatgtggtcatactcctata
tagctagttatgttcatgtctatagatttgtgctgttctcaaccttgatc
agagaagcaccttactgaagtgggtgataacacagaaactcctaactgtt
caaagtcctgggaataagtgactgtaagctatcagctgtagttggaaatc
tctatcaaccaactccatcccatgaaggttcaggggacatcacagaagac
tagggagggaatcaatgtaccagctagaggacatgaaggaatcctatgaa
ggctgacctctggatgtgacatggctacctcatatggaggctcacagtat
ttgtggctatctctataagaccttcataagatcaagagatttaaagattt
cggtatggattggggagcggctcttgacttagctacggaattaatggtag
ttgatggtggctgaaagaagaagactttctttatttagggagagagtggc
cattttagtttgcccaaacccagtggatgacccacacatttgcacatgag
ctgcatgtgttatttaaaaacacatgagatttgagatttgaagggagatg
ggagtgtttaagtgactcaaggacaagtcagtgggagtgtagtcggagat
tgatatgaccga
gaattctcttttgaataaatgctattaatttcctgcatccaccataaaaa
cacatttgacatttacatcaataatactatgaatatttttataacatcag
gttcatcttaatattttgcttatcaaacatgatgatgtcttgacaggaat
acttcagccttcttttcttgttttttttttttttaaatgttcctctttaa
ttttgctgaccaagtataaaagactaggtttaaattattaatctttgttg
caatcaagtccaacagcccatgttgaaaaataacatatgtgtgagaaaga
tgactttcaaggtgagacttgctttaagctaaagcaccaccatgctttca
gaggctaagtgaatctgtatacccagtcttcctggggattatacatgata
ctttcaggataccttcttcaagaagtctgtgatattctacttaaatcctt
tacaaggtctatattacctattattttgataagttcattcacatatgaag
tatattcggatactctatcctcccttactggctctagtccaatccccaag
ggtaaggtcctcccaaaaggcctttcctccattaatgcctttgattttta
aaagccctgaatttaaccggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_119790024_119790649
seq2: B6Ng01-008G11.g_67_689 (reverse)

seq1  AATCCTGGTTAAACTCAGTGGCTCTTAAAAATCAAAGGCATTAATGTGAG  50
      ||||| ||||||| |||| |||| |||||||||||||||||||||| |||
seq2  AATCC-GGTTAAATTCAG-GGCTTTTAAAAATCAAAGGCATTAATG-GAG  47

seq1  GAAAGGCCTTATGGGAGGACCATGACACTAGTGGAATGAGACTAGAGACA  100
      |||||||||| |||||||||| | || || | ||| || |||||||| ||
seq2  GAAAGGCCTTTTGGGAGGACC-TTACCCTTGGGGATTG-GACTAGAGCCA  95

seq1  GTAA-GGAGGATAGAGTTATCCGAATATACTTCATATGTGAATGAACTTA  149
      |||| ||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTAAGGGAGGATAGAG-TATCCGAATATACTTCATATGTGAATGAACTTA  144

seq1  TC-AAATAATAGGTAATATAGACCTTGT-AAGGATTTAAGTAGAATATCA  197
      || ||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCAAAATAATAGGTAATATAGACCTTGTAAAGGATTTAAGTAGAATATCA  194

seq1  CAGACTTCTTGAAGAAGGTATCCTGAAAGTATCATGTATAATCCCCAGGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTCTTGAAGAAGGTATCCTGAAAGTATCATGTATAATCCCCAGGA  244

seq1  AGACTGGGTATACAGATTCACTTAGCCTCTGAAAGCATGGTGGTGCTTTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGGTATACAGATTCACTTAGCCTCTGAAAGCATGGTGGTGCTTTA  294

seq1  GCTTAAAGCAAGTCTCACCTTGAAAGTCATCTTTCTCACACATATGTTAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAAGCAAGTCTCACCTTGAAAGTCATCTTTCTCACACATATGTTAT  344

seq1  TTTTCAACATGGGCTGTTGGACTTGATTGCAACAAAGATTAATAATTTAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACATGGGCTGTTGGACTTGATTGCAACAAAGATTAATAATTTAA  394

seq1  ACCTAGTCTTTTATACTTGGTCAGCAAAATTAAAGAGGAACATTTAAAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGTCTTTTATACTTGGTCAGCAAAATTAAAGAGGAACATTTAAAAA  444

seq1  AAAAAAAAACAAGAAAAGAAGGCTGAAGTATTCCTGTCAAGACATCATCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAACAAGAAAAGAAGGCTGAAGTATTCCTGTCAAGACATCATCA  494

seq1  TGTTTGATAAGCAAAATATTAAGATGAACCTGATGTTATAAAAATATTCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGATAAGCAAAATATTAAGATGAACCTGATGTTATAAAAATATTCA  544

seq1  TAGTATTATTGATGTAAATGTCAAATGTGTTTTTATGGTGGATGCAGGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTATTGATGTAAATGTCAAATGTGTTTTTATGGTGGATGCAGGAA  594

seq1  ATTAATAGCATTTATTCAAAAGAGAATTC  626
      |||||||||||||||||||||||||||||
seq2  ATTAATAGCATTTATTCAAAAGAGAATTC  623