BAC Information

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BAC

Clone NameB6Ng01-008H08
Chromosome14 (Build37)
Map Location 102,322,581 - 102,322,877
singlet/doubletsinglet
Overlap geneLmo7
Upstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3, LOC100043795
Downstream geneLOC545567, LOC669278
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008H08.bB6Ng01-008H08.g
ACCDH844709DH844710
length305489
definitionDH844709|Mus musculus domesticus DNA, BAC clone: B6Ng01-008H08, 5' end.DH844710|Mus musculus domesticus DNA, BAC clone: B6Ng01-008H08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aaattgaattgaaagaattttgatggggattgcattgaatctgtagattg
ctttcaccaggatagccattttgactatattaatcctgccaaaccatgag
catgggagatctttgcatcttctgagaccttcttcaatttctttcttcag
agacttgaagttcttatcatacagatctttcacttccttagttagagtcg
caccaaagtattttatattatttgtgactattgtgaagggtgttgtttct
ctaatttctttctcagcccatttatcctttgtgtagagaaaggccattga
tttgt
tgttccattgatctacctccatgtatctgtaccaataccatgcagttttt
aattctgattgctctgtagtacagcttgaggtcaggatggtgattccctc
agaagttcttttattgttgagaatagtttcactatcctcagttttttgtt
attccagatgtactggctggtttcgtgtgtcaacttgacacaggctggag
ttattacagagaaaggagcttcagttgaggaagtgcctctatgagatcca
actgtaaggcattttctcaatcagtgatttggggggcttgtgtgtggggg
taccatctctgggctggtagtcttgggttctataagagagcaagctgagc
aacccatggctccagccacatatgtagtagaggatgaccttgtgggacat
cagtgggaggagaggaccttggtccggtgaaggctcgatgtcccagtgta
ggggaatgccaggacagggaagtgggagtgggtaggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102322581_102322877
seq2: B6Ng01-008H08.b_55_354 (reverse)

seq1  ATAAATCAATGGCCTTTCTCTACACAAAGGATAAATGGACTGAGAAAGAA  50
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACAAATCAATGGCCTTTCTCTACACAAAGGATAAATGGGCTGAGAAAGAA  50

seq1  ATTAGGGAAACAATACCCTTCACAATAGTCACAAATTA-ATAAAATACCT  99
      ||||| ||||||| |||||||||||||||||||||| | ||||||||| |
seq2  ATTAGAGAAACAACACCCTTCACAATAGTCACAAATAATATAAAATACTT  100

seq1  TGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCA  149
      ||| | ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCA  150

seq1  AGTCTCTGAAGAAA-AAATCAAAGA---TCTCAGAAGATGGAAAGATCTC  195
      |||||||||||||| ||||  ||||   |||||||||||| |||||||||
seq2  AGTCTCTGAAGAAAGAAATTGAAGAAGGTCTCAGAAGATGCAAAGATCTC  200

seq1  CCACGCTCATGGATTGTCAGGATTAATATAGTAAAAATGACTATCTTACC  245
      ||| |||||||| ||| ||||||||||||||| |||||| ||||| |   
seq2  CCATGCTCATGGTTTGGCAGGATTAATATAGTCAAAATGGCTATCCTGGT  250

seq1  AAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAAT  295
       ||||||||||||||||||||||||||||||||||||||||    |||||
seq2  GAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTC--TTTCAAT  298

seq1  TC  297
      ||
seq2  TC  300