BAC Information

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BAC

Clone NameB6Ng01-008P23
Chromosome14 (Build37)
Map Location 109,441,093 - 109,574,609
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668757, EG668761, Slitrk1
Downstream geneLOC640892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008P23.bB6Ng01-008P23.g
ACCDH845064DH845065
length1,0251,013
definitionDH845064|Mus musculus domesticus DNA, BAC clone: B6Ng01-008P23, 5' end.DH845065|Mus musculus domesticus DNA, BAC clone: B6Ng01-008P23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,573,575 - 109,574,609)(109,441,093 - 109,442,125)
sequence
gaattcttcagagaagttcccttcagttccttctggatacataaagcaac
tatgtaaacataaaaatggtggacacgactgtcttttttcaatttgaaaa
caaattaaaggatgtaagttcccaggtattacaggggcagcagcaactac
ttgcctagattagcaagatttggaattcatcagtagagtattttcgacag
atgcaggaagaaggagtggacacagactgagaatacacatccacagaaag
acttgaggaagtgtgaaaaaatacgcttacagaagttcaactttataaaa
agaagcctgagacactggtcaaagcagaaactttttattcaaagaaaaat
gttttatatttcaaagtccattcaccaggcatcaaaaaagaagcatttct
ctcaagcattattctgttttctgatatgtaaatcagaaaatttaagggaa
aactgttcatattcttatccagtacatactttcatgtcaagaatcaaaaa
tgttaacaaaacagcagcaaactctttttcacttgcactatctaggcttc
tgagttattaaaggctattcaaatatttcacaatcctcctaaaagatttc
tttacaaaacctggttttcagtagaatcttcattaactaagctgtagagt
atcttatgaaaactcaattttcaaaatataaatttatgctaagttggtgt
ggttaaataagataaaacaacatcgcacaagaagataagttttagatttg
aagagaacaaaaacataagcagtgtttttatagttatttaaaaatttgac
acctcagagctcccagggacgaccaaccaaagagcatacatggactgttc
catggatccagttgcatatataacagatgtttggttctttgtttgttttg
ttttgttttgtttgttttgtttgtttttacatctggcattaatgggaggg
cgaccattggtcctgtgagtttcatgactcagcgtagttgggtgccagaa
tggtgaggcagagtggtgtggtgtg
gaattcaaatattttgatatagaaatgatgcaaggaaaacaacaacaaca
aacattggaaaataccaagaattttaaaattttggacaagaggaagattc
ttcaaaaaacacttaaaatgttaaaacagtaacaaacagcaaccattatt
ccaactgcttttctctgctctcttaaaactgaatccatagtcaactttag
gaattaatctaaacagaaaactagaaggtaaattgattatatgaattatc
ctgatccaaagatagcaacacttaatgcttgatcccaggaggataacatc
agtattgtaaacatccctccttaaacttgggccacacaaaacagctttta
atgactcaaagtttaaatctgactgttataaattgtagttaattagtttt
tcctatgtggggtcataaattatataatgtacattttataaccaagaatc
taggtatccttggttgagtaaaattttatgcacatcctattcaatgcttc
aagagacaatggcacagggcactaggtcctttgttttattattattatta
ttattattattattattattattattatgtctacaagggatacctccttt
attttactccctgatttattttcttttgggatactgtgtttcatcatcat
atattcctggaaaaattgatatgcagaccaaggtggcctagaactattac
aaatcgttctgcctttgcctgctaaacaaatactgagattacagacatgc
acatgtacaccctattcttaaaaagaatggcatcttttgggatgatgctt
taaggagttatgtcccctaatcatgggctgcctcacccatgagtcaggag
tgattattcggttctctttgactttagtgtatagctgagctcaactcaag
ctctgttcctttcctctttgtgtgctctcttctctctctctctctttctc
tatggggcagcttactacttctcttctctgcttctctctcatttctcact
agctcaactctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_109573575_109574609
seq2: B6Ng01-008P23.b_46_1070 (reverse)

seq1  CACACCCACACCCACTCCTGCCTCACCATTCTGGCACCCAACTACGCTGG  50
      |||| ||||| ||||| |||||||||||||||||||||||||||||||| 
seq2  CACA-CCACA-CCACT-CTGCCTCACCATTCTGGCACCCAACTACGCTGA  47

seq1  GTCATGGAACCTCCACAGGACCAATGGTCGCCCTCCCATTAATGCCAGAT  100
      |||||| |||   |||||||||||||||||||||||||||||||||||||
seq2  GTCATGAAAC--TCACAGGACCAATGGTCGCCCTCCCATTAATGCCAGAT  95

seq1  GTAAAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAGA  150
      |||||||   ||||||||| ||||||||||||||||||||||   |||||
seq2  GTAAAAA--CAAACAAAAC-AAACAAAACAAAACAAAACAAA--CAAAGA  140

seq1  ACCAAACATCTGTTATATATGCAACTGGATCCATGGAACAGTCCATGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACATCTGTTATATATGCAACTGGATCCATGGAACAGTCCATGTAT  190

seq1  GCTCTTTGGTTGGTCGTCCCTGGGAGCTCTGAGGTGTCAAATTTTTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTGGTTGGTCGTCCCTGGGAGCTCTGAGGTGTCAAATTTTTAAAT  240

seq1  AACTATAAAAACACTGCTTATGTTTTTGTTCTCTTCAAATCTAAAACTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAAAAACACTGCTTATGTTTTTGTTCTCTTCAAATCTAAAACTTA  290

seq1  TCTTCTTGTGCGATGTTGTTTTATCTTATTTAACCACACCAACTTAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGTGCGATGTTGTTTTATCTTATTTAACCACACCAACTTAGCAT  340

seq1  AAATTTATATTTTGAAAATTGAGTTTTCATAAGATACTCTACAGCTTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATATTTTGAAAATTGAGTTTTCATAAGATACTCTACAGCTTAGT  390

seq1  TAATGAAGATTCTACTGAAAACCAGGTTTTGTAAAGAAATCTTTTAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAGATTCTACTGAAAACCAGGTTTTGTAAAGAAATCTTTTAGGAG  440

seq1  GATTGTGAAATATTTGAATAGCCTTTAATAACTCAGAAGCCTAGATAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGAAATATTTGAATAGCCTTTAATAACTCAGAAGCCTAGATAGTG  490

seq1  CAAGTGAAAAAGAGTTTGCTGCTGTTTTGTTAACATTTTTGATTCTTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAAAAAGAGTTTGCTGCTGTTTTGTTAACATTTTTGATTCTTGAC  540

seq1  ATGAAAGTATGTACTGGATAAGAATATGAACAGTTTTCCCTTAAATTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGTATGTACTGGATAAGAATATGAACAGTTTTCCCTTAAATTTTC  590

seq1  TGATTTACATATCAGAAAACAGAATAATGCTTGAGAGAAATGCTTCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTACATATCAGAAAACAGAATAATGCTTGAGAGAAATGCTTCTTTT  640

seq1  TTGATGCCTGGTGAATGGACTTTGAAATATAAAACATTTTTCTTTGAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCCTGGTGAATGGACTTTGAAATATAAAACATTTTTCTTTGAATA  690

seq1  AAAAGTTTCTGCTTTGACCAGTGTCTCAGGCTTCTTTTTATAAAGTTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTTCTGCTTTGACCAGTGTCTCAGGCTTCTTTTTATAAAGTTGAA  740

seq1  CTTCTGTAAGCGTATTTTTTCACACTTCCTCAAGTCTTTCTGTGGATGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTAAGCGTATTTTTTCACACTTCCTCAAGTCTTTCTGTGGATGTG  790

seq1  TATTCTCAGTCTGTGTCCACTCCTTCTTCCTGCATCTGTCGAAAATACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCAGTCTGTGTCCACTCCTTCTTCCTGCATCTGTCGAAAATACTC  840

seq1  TACTGATGAATTCCAAATCTTGCTAATCTAGGCAAGTAGTTGCTGCTGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATGAATTCCAAATCTTGCTAATCTAGGCAAGTAGTTGCTGCTGCC  890

seq1  CCTGTAATACCTGGGAACTTACATCCTTTAATTTGTTTTCAAATTGAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAATACCTGGGAACTTACATCCTTTAATTTGTTTTCAAATTGAAAA  940

seq1  AAGACAGTCGTGTCCACCATTTTTATGTTTACATAGTTGCTTTATGTATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGTCGTGTCCACCATTTTTATGTTTACATAGTTGCTTTATGTATC  990

seq1  CAGAAGGAACTGAAGGGAACTTCTCTGAAGAATTC  1035
      |||||||||||||||||||||||||||||||||||
seq2  CAGAAGGAACTGAAGGGAACTTCTCTGAAGAATTC  1025

seq1: chr14_109441093_109442125
seq2: B6Ng01-008P23.g_68_1080

seq1  GAATTCAAATATTTTGATATAGAAATGATGCAAGGAAAACAACAACAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATATTTTGATATAGAAATGATGCAAGGAAAACAACAACAACA  50

seq1  AACATTGGAAAATACCAAGAATTTTAAAATTTTGGACAAGAGGAAGATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGGAAAATACCAAGAATTTTAAAATTTTGGACAAGAGGAAGATTC  100

seq1  TTCAAAAAACACTTAAAATGTTAAAACAGTAACAAACAGCAACCATTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAAACACTTAAAATGTTAAAACAGTAACAAACAGCAACCATTATT  150

seq1  CCAACTGCTTTTCTCTGCTCTCTTAAAACTGAATCCATAGTCAACTTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGCTTTTCTCTGCTCTCTTAAAACTGAATCCATAGTCAACTTTAG  200

seq1  GAATTAATCTAAACAGAAAACTAGAAGGTAAATTGATTATATGAATTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAATCTAAACAGAAAACTAGAAGGTAAATTGATTATATGAATTATC  250

seq1  CTGATCCAAAGATAGCAACACTTAATGCTTGATCCCAGGAGGATAACATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCCAAAGATAGCAACACTTAATGCTTGATCCCAGGAGGATAACATC  300

seq1  AGTATTGTAAACATCCCTCCTTAAACTTGGGCCACACAAAACAGCTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGTAAACATCCCTCCTTAAACTTGGGCCACACAAAACAGCTTTTA  350

seq1  ATGACTCAAAGTTTAAATCTGACTGTTATAAATTGTAGTTAATTAGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCAAAGTTTAAATCTGACTGTTATAAATTGTAGTTAATTAGTTTT  400

seq1  TCCTATGTGGGGTCATAAATTATATAATGTACATTTTATAACCAAGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGTGGGGTCATAAATTATATAATGTACATTTTATAACCAAGAATC  450

seq1  TAGGTATCCTTGGTTGAGTAAAATTTTATGCACATCCTATTCAATGCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATCCTTGGTTGAGTAAAATTTTATGCACATCCTATTCAATGCTTC  500

seq1  AAGAGACAATGGCACAGGGCACTAGGTCCTTTGTTTTATTATTATTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACAATGGCACAGGGCACTAGGTCCTTTGTTTTATTATTATTATTA  550

seq1  TTATTATTATTATTATTATTATTATTATGTCTACAAGGGATACCTCCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTATTATTATTATTATTATTATGTCTACAAGGGATACCTCCTTT  600

seq1  ATTTTACTCCCTGATTTATTTTCTTTTGGGATACTGTGTTTCATCATCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTCCCTGATTTATTTTCTTTTGGGATACTGTGTTTCATCATCAT  650

seq1  ATATTCCTGGAAAAATTGATATGCAGACCAAGGTGGCCTAGAACTATTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCTGGAAAAATTGATATGCAGACCAAGGTGGCCTAGAACTATTAC  700

seq1  AAATCGTTCTGCCTTTGCCTGCTAAACAAATACTGAGATTACAGACATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGTTCTGCCTTTGCCTGCTAAACAAATACTGAGATTACAGACATGC  750

seq1  ACATGTACACCCTATTCTTAAAAAGAATGGCATCTTTTGGGATGATGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTACACCCTATTCTTAAAAAGAATGGCATCTTTTGGGATGATGCTT  800

seq1  TAAGGAGTTATGTCCCCTAATCATGGGCTGCCTCACCCATGAGTCAGGGA  850
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TAAGGAGTTATGTCCCCTAATCATGGGCTGCCTCACCCATGAGTCA-GGA  849

seq1  GTGATTATTCGGTTCTCTTTGACTTTAGTGTATAGCTGAGGCTCAACTCA  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTGATTATTCGGTTCTCTTTGACTTTAGTGTATAGCTGA-GCTCAACTCA  898

seq1  AGCTCTTGTTTCCTTTCCTTCTTTGTGTGCTCCTCTTCCTCCTTCTTCCT  950
      ||||||   ||||||||| |||||||||||| ||||||     |||  ||
seq2  AGCTCT--GTTCCTTTCC-TCTTTGTGTGCT-CTCTTC-----TCTCTCT  939

seq1  CTCTTCTTTCTTCTATGGGGCAGCTTACTACTTCTCCTTCTTCTGCTTTC  1000
      ||| |||||| |||||||||||||||||||||||| |||| ||||| |||
seq2  CTC-TCTTTC-TCTATGGGGCAGCTTACTACTTCT-CTTC-TCTGC-TTC  984

seq1  TCCTCCTCATTTCTCACTAGCTCAAAACTCTGG  1033
      ||   ||||||||||||||||||  ||||||||
seq2  TC--TCTCATTTCTCACTAGCTC--AACTCTGG  1013