BAC Information

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BAC

Clone NameB6Ng01-009D24
Chromosome14 (Build37)
Map Location 28,324,089 - 28,437,289
singlet/doubletdoublet
Overlap geneLOC665370, Erc2
Upstream geneSlmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66
Downstream geneLOC100040206, Wnt5a, LOC100040218
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009D24.bB6Ng01-009D24.g
ACCDH845243DH845244
length1,045695
definitionDH845243|Mus musculus domesticus DNA, BAC clone: B6Ng01-009D24, 5' end.DH845244|Mus musculus domesticus DNA, BAC clone: B6Ng01-009D24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,436,238 - 28,437,289)(28,324,089 - 28,324,783)
sequence
gaattctctctattcatgttcaaaaacatcttataaacctaccaaatctg
atgtaagagccaaactacatactcagaaacagtgtgagttcacaaggaca
agggtagggtgaccacaggagacggcgagccacacccttctctagatagc
tcaacagtaagtgcatctcttctaaagaagactgcgattctgaaggaaag
gtagatcattccaacctgccgtcccagcagccagcccatgcccgcttcgc
tctttatacagattgatttcatgtttaagccaacgacctcggcatccaca
gctacaactagtgacggacaggaaagacaggaggagaacacaggttgaac
atacttgcttctaagcccattgtcgaggagttggcttcccgcttctctgc
ttctcacagctggagtcctacctggtggaaaccaatggttaagtaaaacc
actgatttaaagagccaaccaggaaactaaccaagacaagtgggagcagc
cctcctctcccgagcattgattggctcttggggttccaccggtcccattc
tatacacataagtggcaggtgcggctgtcagtcacgaagagaactgacaa
ttcaccgctctgggagtaaattgtctttcatccagcaaaggcaggtagcc
gcctaaaatcgatcttctcctaagggagcggaccctccctctggcaagga
ggagaaagacccctaactacaaaataaattatgtagggctaaacagggga
gagtttgtgggtactatttgattttcacacaccgaaagagcccttattct
tcactgtcctaaaaatgatctttcaaaggctcatacaggaataataataa
taataatttttaaaggtaccttccttgtaagtaccccttgtgtaattagg
aggtggggagagaatcggtaggatgctgtttaattcacatcgtatctttt
tcatacatcacctcctactctcccagtaatcatctcattttccaggcatg
aattttctgtttataacctggcatctcttccctgcccccctttcc
gaattccaggtcagcaagagctacataaaaagcctatgtgttatatataa
aataaataaataaataaaagggctagagtcggcaggttaatagacatttt
ctgggaggtagagtagtgtgaatttgaaagtcttacctttttctttgagt
tagtgtggcatgtatacatgcaaggtgtgagttctcatgtgtgctcgagt
gggtgcacacacacatgtgcgaggccacaggtggatggagactggggttt
tcttccctatttctctccctttgtatattgaaggctttctcacgtggagc
ccagagtttgctaactcagctggtttatctagccagctcgccctacccca
tctctgctgtgggggtctcagcaaataccagggccagcaaaatgtctgtt
tgcaggaggcaaggcaaaagctcagttcaactcaactcagtagccagtgt
tggttccagttttgacagcctggctccgagtggcttttttcaggcatatt
taaagccagcacaatgtggaaaacttttttctggtgataaataactcaac
gcagtatgtacaacaaaacttgacaagatttcatctaaactcttgtaaag
tgcacgtaacatcctccatatggataggttctattgattaactaaggaag
caggctcaagggaaacagcactcatagggacctgggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28436238_28437289
seq2: B6Ng01-009D24.b_43_1087 (reverse)

seq1  GGAAAGGGGGGCGGGGAAGGGATG-CAGGTTATAAAAAGAAAAATTCATG  49
      |||||||||||| |||||| |||| ||||||||||| || ||||||||||
seq2  GGAAAGGGGGGCAGGGAAGAGATGCCAGGTTATAAACAG-AAAATTCATG  49

seq1  CCTGGGAAAATGAAGATGATTTACTGGGGAGGGGTAGGAGGTGGTGTATG  99
      ||| |||||||| |||||| ||||||||   | |||||||||| ||||||
seq2  CCT-GGAAAATG-AGATGA-TTACTGGG--AGAGTAGGAGGTGATGTATG  94

seq1  AAAAAGGATACGATGTGAAATTAAACAGCATTCCTACCGATTCTCTCCCC  149
      ||||| ||||||||||| |||||||||||| |||||||||||||||||||
seq2  AAAAA-GATACGATGTG-AATTAAACAGCA-TCCTACCGATTCTCTCCCC  141

seq1  ACCTCCTAATTACACAAGGGGTACTTACAAGG-AGGTACCTTTAAAAATT  198
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACCTCCTAATTACACAAGGGGTACTTACAAGGAAGGTACCTTTAAAAATT  191

seq1  ATTATTATTATTATTCCTGTATGAGCCTTTGAAAGATCATTTTTAGGACA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATTATTATTCCTGTATGAGCCTTTGAAAGATCATTTTTAGGACA  241

seq1  GTGAAGAATAAGGGCTCTTTCGGTGTGTGAAAATCAAATAGTACCCACAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAATAAGGGCTCTTTCGGTGTGTGAAAATCAAATAGTACCCACAA  291

seq1  ACTCTCCCCTGTTTAGCCCTACATAATTTATTTTGTAGTTAGGGGTCTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCCCTGTTTAGCCCTACATAATTTATTTTGTAGTTAGGGGTCTTT  341

seq1  CTCCTCCTTGCCAGAGGGAGGGTCCGCTCCCTTAGGAGAAGATCGATTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTTGCCAGAGGGAGGGTCCGCTCCCTTAGGAGAAGATCGATTTT  391

seq1  AGGCGGCTACCTGCCTTTGCTGGATGAAAGACAATTTACTCCCAGAGCGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGGCTACCTGCCTTTGCTGGATGAAAGACAATTTACTCCCAGAGCGG  441

seq1  TGAATTGTCAGTTCTCTTCGTGACTGACAGCCGCACCTGCCACTTATGTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGTCAGTTCTCTTCGTGACTGACAGCCGCACCTGCCACTTATGTG  491

seq1  TATAGAATGGGACCGGTGGAACCCCAAGAGCCAATCAATGCTCGGGAGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAATGGGACCGGTGGAACCCCAAGAGCCAATCAATGCTCGGGAGAG  541

seq1  GAGGGCTGCTCCCACTTGTCTTGGTTAGTTTCCTGGTTGGCTCTTTAAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTGCTCCCACTTGTCTTGGTTAGTTTCCTGGTTGGCTCTTTAAAT  591

seq1  CAGTGGTTTTACTTAACCATTGGTTTCCACCAGGTAGGACTCCAGCTGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTTTTACTTAACCATTGGTTTCCACCAGGTAGGACTCCAGCTGTG  641

seq1  AGAAGCAGAGAAGCGGGAAGCCAACTCCTCGACAATGGGCTTAGAAGCAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGAGAAGCGGGAAGCCAACTCCTCGACAATGGGCTTAGAAGCAA  691

seq1  GTATGTTCAACCTGTGTTCTCCTCCTGTCTTTCCTGTCCGTCACTAGTTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTCAACCTGTGTTCTCCTCCTGTCTTTCCTGTCCGTCACTAGTTG  741

seq1  TAGCTGTGGATGCCGAGGTCGTTGGCTTAAACATGAAATCAATCTGTATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTGGATGCCGAGGTCGTTGGCTTAAACATGAAATCAATCTGTATA  791

seq1  AAGAGCGAAGCGGGCATGGGCTGGCTGCTGGGACGGCAGGTTGGAATGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCGAAGCGGGCATGGGCTGGCTGCTGGGACGGCAGGTTGGAATGAT  841

seq1  CTACCTTTCCTTCAGAATCGCAGTCTTCTTTAGAAGAGATGCACTTACTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTTCCTTCAGAATCGCAGTCTTCTTTAGAAGAGATGCACTTACTG  891

seq1  TTGAGCTATCTAGAGAAGGGTGTGGCTCGCCGTCTCCTGTGGTCACCCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTATCTAGAGAAGGGTGTGGCTCGCCGTCTCCTGTGGTCACCCTA  941

seq1  CCCTTGTCCTTGTGAACTCACACTGTTTCTGAGTATGTAGTTTGGCTCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTCCTTGTGAACTCACACTGTTTCTGAGTATGTAGTTTGGCTCTT  991

seq1  ACATCAGATTTGGTAGGTTTATAAGATGTTTTTGAACATGAATAGAGAGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGATTTGGTAGGTTTATAAGATGTTTTTGAACATGAATAGAGAGA  1041

seq1  ATTC  1052
      ||||
seq2  ATTC  1045

seq1: chr14_28324089_28324783
seq2: B6Ng01-009D24.g_68_762

seq1  GAATTCCAGGTCAGCAAGAGCTACATAAAAAGCCTATGTGTTATATATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTCAGCAAGAGCTACATAAAAAGCCTATGTGTTATATATAA  50

seq1  AATAAATAAATAAATAAAAGGGCTAGAGTCGGCAGGTTAATAGACATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATAAATAAAAGGGCTAGAGTCGGCAGGTTAATAGACATTTT  100

seq1  CTGGGAGGTAGAGTAGTGTGAATTTGAAAGTCTTACCTTTTTCTTTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGGTAGAGTAGTGTGAATTTGAAAGTCTTACCTTTTTCTTTGAGT  150

seq1  TAGTGTGGCATGTATACATGCAAGGTGTGAGTTCTCATGTGTGCTCGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGGCATGTATACATGCAAGGTGTGAGTTCTCATGTGTGCTCGAGT  200

seq1  GGGTGCACACACACATGTGCGAGGCCACAGGTGGATGGAGACTGGGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCACACACACATGTGCGAGGCCACAGGTGGATGGAGACTGGGGTTT  250

seq1  TCTTCCCTATTTCTCTCCCTTTGTATATTGAAGGCTTTCTCACGTGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTATTTCTCTCCCTTTGTATATTGAAGGCTTTCTCACGTGGAGC  300

seq1  CCAGAGTTTGCTAACTCAGCTGGTTTATCTAGCCAGCTCGCCCTACCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTTTGCTAACTCAGCTGGTTTATCTAGCCAGCTCGCCCTACCCCA  350

seq1  TCTCTGCTGTGGGGGTCTCAGCAAATACCAGGGCCAGCAAAATGTCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTGTGGGGGTCTCAGCAAATACCAGGGCCAGCAAAATGTCTGTT  400

seq1  TGCAGGAGGCAAGGCAAAAGCTCAGTTCAACTCAACTCAGTAGCCAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAGGCAAGGCAAAAGCTCAGTTCAACTCAACTCAGTAGCCAGTGT  450

seq1  TGGTTCCAGTTTTGACAGCCTGGCTCCGAGTGGCTTTTTTCAGGCATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCAGTTTTGACAGCCTGGCTCCGAGTGGCTTTTTTCAGGCATATT  500

seq1  TAAAGCCAGCACAATGTGGAAAACTTTTTTCTGGTGATAAATAACTCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCAGCACAATGTGGAAAACTTTTTTCTGGTGATAAATAACTCAAC  550

seq1  GCAGTATGTACAACAAAACTTGACAAGATTTCATCTAAACTCTTGTAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATGTACAACAAAACTTGACAAGATTTCATCTAAACTCTTGTAAAG  600

seq1  TGCACGTAACATCCTCCATATGGATAGGTTCTATTGATTAACTAAGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGTAACATCCTCCATATGGATAGGTTCTATTGATTAACTAAGGAAG  650

seq1  CAGGCTCAAGGGAAACAGCACTCATAGGGACCTGGGGGGGGGGGG  695
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCAAGGGAAACAGCACTCATAGGGACCTGGGGGGGGGGGG  695