BAC Information

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BAC

Clone NameB6Ng01-009O04
Chromosome14 (Build37)
Map Location 109,260,552 - 109,261,727
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668757, EG668761
Downstream geneSlitrk1, LOC640892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009O04.bB6Ng01-009O04.g
ACCDH845709DH845710
length1,1651,265
definitionDH845709|Mus musculus domesticus DNA, BAC clone: B6Ng01-009O04, 5' end.DH845710|Mus musculus domesticus DNA, BAC clone: B6Ng01-009O04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaaatatataacagacatgtgtagaatttgtaacaaattgatt
tgaggagtaatggtaagggtaaagtcattttcagctcttgcccttctcac
acattctctgtgaatccctgcaccctccttattttttctgatagattctc
ttgtaagcaaagctgggctcaaatgcactccttggctgaggatgtctttg
aattccaggtccatcttcatctatctcccaggggcaaatacttttgcaac
tattttttcctttttacacttctacttaagaaaatagcttcatttgtcac
caatttaacagaaaatttgaaacaataggttattgacataaatagaaaag
attgaattttaatttttaatagctttgaccattggctataaggatatctg
ctacatttacaaagggaaatttatgatggctgaaaggctttttactgatt
atgtaaattatggttcaataatctgtattgtagtggtcaagtgtaaagtt
ttaaattaagttatataagcactttatgtggcatggataattgagttcat
taggtcaaaatatgttagtagacaatgatacaccaggaaacaatatttat
aagaaaatactatcagaccaaagtaggtaccgcaaccattcaaaaaactc
aaaagttttgttacctaatataaatccaacttaaagggaatatgttttct
aaaattcagtaaggttatcattacatgtaattttgagtattcttagttta
tgtgttttctttatatatggggttccagaataagttaagaactactatat
agcattttcaacccacagatttttttcatacccatgtcattttatgaaat
ccatagctacatttaaactagaaagggaacatgtttagtgcccgtttaca
gacactcagttcaaaagtcaaatgcttgctaagaaagagccaaattcaac
ctaaataacttttccctaattctggcattgtgtcagcactgtaacagtgt
ctcatttgatatgtatcagctatgtggactgattatatcttaagtgtgaa
aacaaagaccagtgaagctgctttcttcttagttcatatagtgaaatgat
ttgacttgaaataataaaccacattcattttgtcgaaacgaattggatgg
gataatattttaatc
gaattcatccattgcatgtggaattacaaatttgtgcatccactatggaa
gtcagtgtggcacttcctaggaaagataattgatcttccccaatatccag
ttataccactcttagacatataccaagaaggttgtttgtcccattacaga
cacaactgctcaaccatggtttttgttcctctatttataatagccagaaa
ctggaagctgtctcagtgaatgaaaggatggagaaaatatgttatattta
cacaatgagatatcactcccttgtttaaaaaaatgaaatagtgaaatttg
caggcaaatgaatgaaactagaaagagaattttctcagtaaaataaccca
aacccagaaagacaaatatgtattcgcttataagtgaatagtattaaaaa
ataagcatcctaaaatacataaaaatcacagaagttaagtgtatagtaag
aatctaatgtggagagacagatctccctagacatggaaaatataataaat
aattatagatgaaagagacattatgtcagaaagatcaagagaaagtggga
ggtagccgaggaagtagaggaatacagggaaagacagctaagtttaacag
ccataaaatggaaacctaattcagtagatgtttcctgaatcatatacata
aaattttagtataaatgaaattgccaaatgacaggagagccagagaccct
attggacatatctcatcactaaatgaattctcaatactggaaatgactta
catgtaaccgattattggccaaagggtatgtatgcctttgggactgtcaa
acagcccagacttttgcaaaggctatatacatcaatctccacaagatgat
ggcagatccttcttgcttttaattacacctacacaacttactgaacatgg
agaagtcgagctgctgcctccttagagttttcacccctacaccatagtct
tcctgatatggggagggtgctctgcatactaccatggggaaatgtaagca
tcaacccagaatatactgtcaggttaaacagtgtcttgcagcagataaac
ttgtgaatcatagtaataagctgtgggcatagctggacaaatatcggatt
ggatttagtcttatcttgagatggaacccatatccatggtgggcttgggt
aagatcaaatttagaatgagggacctaggcaagcagtcattcttagacca
gagtttccatgagtccatttgcactcaattcccagtaattagaatagtgc
cagtagcctgtggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_109260552_109261727
seq2: B6Ng01-009O04.b_49_1213 (reverse)

seq1  GATTAAAATATTATCACATCCAATTCTGTTCTGACAAAAATGAATTGTGT  50
      ||||||||||||||| |||||||||| |||  ||| |||||||||   ||
seq2  GATTAAAATATTATCCCATCCAATTC-GTTTCGAC-AAAATGAATGTGGT  48

seq1  TTATATATTTCAAGTCAAAATCATTTTCACTATAATGAACTAAAGAAGAA  100
      |||| ||||||||||| |||||| ||||||||| ||||||| ||||||||
seq2  TTAT-TATTTCAAGTC-AAATCA-TTTCACTAT-ATGAACT-AAGAAGAA  93

seq1  AGCAAGCTTCACTGGTCTTTGTTTTCACACTATAAGATAATAAATCAGTC  150
      ||| ||||||||||||||||||||||||||| |||||||   ||||||||
seq2  AGC-AGCTTCACTGGTCTTTGTTTTCACACT-TAAGATA--TAATCAGTC  139

seq1  CACATAGCTGAATAACATATCAAATGAGACACTGTTACAGTGCTGACACA  200
      |||||||||||   ||||||||||||||||||||||||||||||||||||
seq2  CACATAGCTGA--TACATATCAAATGAGACACTGTTACAGTGCTGACACA  187

seq1  ATGCCAGAATTAGGGAAAAGTTATTTAGGTTGAATTTGGCTCTTTCTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGAATTAGGGAAAAGTTATTTAGGTTGAATTTGGCTCTTTCTTAG  237

seq1  CAAGCATTTGACTTTTGAACTGAGTGTCTGTAAACGGGCACTAAACATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATTTGACTTTTGAACTGAGTGTCTGTAAACGGGCACTAAACATGT  287

seq1  TCCC-TTCTAGTTTAAATGTAGCTATGGATTTCATAAAATGACATGGGTA  349
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTCTAGTTTAAATGTAGCTATGGATTTCATAAAATGACATGGGTA  337

seq1  TGAAAAAAATCTGTGGGTTGAAAATGCTATATAGTAGTTCTTAACTTATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAAATCTGTGGGTTGAAAATGCTATATAGTAGTTCTTAACTTATT  387

seq1  CTGGAACCCCATATATAAAG-AAACACATAAACTAAGAATACTCAAAATT  448
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGGAACCCCATATATAAAGAAAACACATAAACTAAGAATACTCAAAATT  437

seq1  ACATGTAATGATAACCTTACTGAATTTTAGAAAACATATTCCCTTTAAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAATGATAACCTTACTGAATTTTAGAAAACATATTCCCTTTAAGT  487

seq1  TGGATTTATATTAGGTAACAAAACTTTTGAGTTTTTTGAATGGTTGCGGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTATATTAGGTAACAAAACTTTTGAGTTTTTTGAATGGTTGCGGT  537

seq1  ACCTACTTTGGTCTGATAGTATTTTCTTATAAATATTGTTTCCTGGTGTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTTTGGTCTGATAGTATTTTCTTATAAATATTGTTTCCTGGTGTA  587

seq1  TCATTGTCTACTAACATATTTTGACCTAATGAACTCAATTATCCATGCCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTCTACTAACATATTTTGACCTAATGAACTCAATTATCCATGCCA  637

seq1  CATAAAGTGCTTATATAACTTAATTTAAAACTTTACACTTGACCACTACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGTGCTTATATAACTTAATTTAAAACTTTACACTTGACCACTACA  687

seq1  ATACAGATTATTGAACCATAATTTACATAATCAGTAAAAAGCCTTTCAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGATTATTGAACCATAATTTACATAATCAGTAAAAAGCCTTTCAGC  737

seq1  CATCATAAATTTCCCTTTGTAAATGTAGCAGATATCCTTATAGCCAATGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAAATTTCCCTTTGTAAATGTAGCAGATATCCTTATAGCCAATGG  787

seq1  TCAAAGCTATTAAAAATTAAAATTCAATCTTTTCTATTTATGTCAATAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCTATTAAAAATTAAAATTCAATCTTTTCTATTTATGTCAATAAC  837

seq1  CTATTGTTTCAAATTTTCTGTTAAATTGGTGACAAATGAAGCTATTTTCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTTTCAAATTTTCTGTTAAATTGGTGACAAATGAAGCTATTTTCT  887

seq1  TAAGTAGAAGTGTAAAAAGGAAAAAATAGTTGCAAAAGTATTTGCCCCTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGAAGTGTAAAAAGGAAAAAATAGTTGCAAAAGTATTTGCCCCTG  937

seq1  GGAGATAGATGAAGATGGACCTGGAATTCAAAGACATCCTCAGCCAAGGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATAGATGAAGATGGACCTGGAATTCAAAGACATCCTCAGCCAAGGA  987

seq1  GTGCATTTGAGCCCAGCTTTGCTTACAAGAGAATCTATCAGAAAAAATAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTTGAGCCCAGCTTTGCTTACAAGAGAATCTATCAGAAAAAATAA  1037

seq1  GGAGGGTGCAGGGATTCACAGAGAATGTGTGAGAAGGGCAAGAGCTGAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTGCAGGGATTCACAGAGAATGTGTGAGAAGGGCAAGAGCTGAAA  1087

seq1  ATGACTTTACCCTTACCATTACTCCTCAAATCAATTTGTTACAAATTCTA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTTACCCTTACCATTACTCCTCAAATCAATTTGTTACAAATTCTA  1137

seq1  CACATGTCTGTTATATATTTGTGAATTC  1176
      ||||||||||||||||||||||||||||
seq2  CACATGTCTGTTATATATTTGTGAATTC  1165